BLASTX nr result

ID: Panax21_contig00032593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032593
         (1356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS90324.2| 3-dehydroquinate dehydratase / shikimate dehydrog...   583   e-164
ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate deh...   582   e-164
ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus c...   555   e-156
ref|XP_003520825.1| PREDICTED: bifunctional 3-dehydroquinate deh...   555   e-155
emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]   547   e-153

>gb|AAS90324.2| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 2
            [Nicotiana tabacum]
          Length = 521

 Score =  583 bits (1503), Expect = e-164
 Identities = 294/395 (74%), Positives = 334/395 (84%)
 Frame = -1

Query: 1329 KIIVSCFLDTVTSAVEDFSKLVARMQSTGADIIKLVFNSTSITELSRIFHLLSHCQVPLI 1150
            K+I SCF+D VTS  ED S++VA MQSTGADI+K+V N+  ITEL ++FHLLSHCQVPLI
Sbjct: 128  KVIASCFVDNVTSK-EDLSQVVAHMQSTGADILKIVTNANDITELEKMFHLLSHCQVPLI 186

Query: 1149 AYSTGERGLISQLLGPKFGCVFVYGSVQGNSVLGLPTLDSLRQAYGIEYVDADTKVFGLI 970
            AYS GERGLISQLLGPKFG V VYGS+  N+V GLPTL SLRQAYG++++D DTKVFGLI
Sbjct: 187  AYSLGERGLISQLLGPKFGSVLVYGSLDCNAVPGLPTLGSLRQAYGVDFMDTDTKVFGLI 246

Query: 969  SKPVSHSKGPMLHNPTFRHIGFNGIYVPMLVDDLKEFFSVYSSPDFSGYSVGIPYKEAVI 790
            SKPV HSKGP+LHNPTFRH+G+NGIYVPM VDDLKEFF VYSSPDF+G+SVGIPYKEAV+
Sbjct: 247  SKPVGHSKGPILHNPTFRHVGYNGIYVPMFVDDLKEFFRVYSSPDFAGFSVGIPYKEAVV 306

Query: 789  EFCDEVHPLAQSIGAVNTIIRRSSDGKLVGYNTDCEASITAIEDALKVWGCTNGKASLPS 610
             FCDEV PLA+SIGAVNTII+R  DGKL+GYNTDCEASITAIEDALKV G TNG A LPS
Sbjct: 307  SFCDEVDPLAKSIGAVNTIIQRPCDGKLIGYNTDCEASITAIEDALKVNGLTNGAAFLPS 366

Query: 609  PITGKQXXXXXXXXXXXXXXXXAKSRGARVVIFDISFDRAKSLAHAVSGEAWPYKDLASF 430
            P+ GK                 AKSR A +VIFDI FDRAK+LA AVSGEA P+++LASF
Sbjct: 367  PLAGKLFVLVGAGGAGRALAFGAKSRRAEIVIFDIDFDRAKALAAAVSGEALPFENLASF 426

Query: 429  LPEKGAILANATPIGMHPNTDRIPVAKVTLEDYKLVFDAVYTPRKTTLLREAESAGTIIV 250
             PEKGAILANATPIGMHPN DRIPV++ +L+DY +VFDAVYTPRKTTLL++AE+AG I V
Sbjct: 427  QPEKGAILANATPIGMHPNKDRIPVSEASLKDYVVVFDAVYTPRKTTLLKDAEAAGAITV 486

Query: 249  SGVEMFLRQAIGQFNLFTGGKAPEEFMRGIVLAKF 145
            SGVEMFLRQAIGQF+LFT  KAPEEFMR IV+AKF
Sbjct: 487  SGVEMFLRQAIGQFHLFTRTKAPEEFMRDIVMAKF 521


>ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
            dehydrogenase, chloroplastic [Vitis vinifera]
            gi|298204989|emb|CBI34296.3| unnamed protein product
            [Vitis vinifera]
          Length = 519

 Score =  582 bits (1500), Expect = e-164
 Identities = 287/404 (71%), Positives = 340/404 (84%)
 Frame = -1

Query: 1356 QKFSRRGSSKIIVSCFLDTVTSAVEDFSKLVARMQSTGADIIKLVFNSTSITELSRIFHL 1177
            QK  +  SS+ IVSC++D VT  +ED    VA +QSTGAD+IKLV N+T+ITE+++IFHL
Sbjct: 116  QKMDQHSSSRTIVSCYVDGVTPPIEDLICRVALLQSTGADMIKLVINATNITEITKIFHL 175

Query: 1176 LSHCQVPLIAYSTGERGLISQLLGPKFGCVFVYGSVQGNSVLGLPTLDSLRQAYGIEYVD 997
            LSHCQ+PLIAYS G+RG +SQ+L  KFG   VYGS++G+ V GLPTL+SLR+AY ++Y++
Sbjct: 176  LSHCQMPLIAYSIGDRGFMSQILCRKFGGFLVYGSMEGSPVAGLPTLESLREAYKVQYIN 235

Query: 996  ADTKVFGLISKPVSHSKGPMLHNPTFRHIGFNGIYVPMLVDDLKEFFSVYSSPDFSGYSV 817
             DTKVFGLISKPV HSKGP+LHNP FRH+ +NGIYVPMLVDDLKEFFS+YSSPDF+G+SV
Sbjct: 236  KDTKVFGLISKPVGHSKGPILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSV 295

Query: 816  GIPYKEAVIEFCDEVHPLAQSIGAVNTIIRRSSDGKLVGYNTDCEASITAIEDALKVWGC 637
            GIPYKEAV  FCDE+HPLAQSIGAVNTI+RR SDGKL+GYNTDCEASITAIEDAL+  G 
Sbjct: 296  GIPYKEAVTGFCDELHPLAQSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGL 355

Query: 636  TNGKASLPSPITGKQXXXXXXXXXXXXXXXXAKSRGARVVIFDISFDRAKSLAHAVSGEA 457
             NG+A L SP+TGKQ                A+SRGA++VIFD+ FDRA SLAHAVSGE 
Sbjct: 356  PNGEAPLNSPLTGKQFVLVGAGGAGRALAFGARSRGAQLVIFDLDFDRANSLAHAVSGEV 415

Query: 456  WPYKDLASFLPEKGAILANATPIGMHPNTDRIPVAKVTLEDYKLVFDAVYTPRKTTLLRE 277
              Y+D+A+F PEKGAILANATP+GMHPNTDRIPVA+ TL DY+LVFD+VYTPRKT LL+E
Sbjct: 416  KLYEDVANFQPEKGAILANATPVGMHPNTDRIPVAEETLSDYQLVFDSVYTPRKTRLLKE 475

Query: 276  AESAGTIIVSGVEMFLRQAIGQFNLFTGGKAPEEFMRGIVLAKF 145
            AE+AG IIVSGVEMFLRQAIGQFNLFTGG+APEEFMR I+L+KF
Sbjct: 476  AEAAGAIIVSGVEMFLRQAIGQFNLFTGGEAPEEFMREIILSKF 519


>ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus communis]
            gi|223548259|gb|EEF49750.1| shikimate dehydrogenase,
            putative [Ricinus communis]
          Length = 519

 Score =  555 bits (1431), Expect = e-156
 Identities = 279/403 (69%), Positives = 330/403 (81%)
 Frame = -1

Query: 1353 KFSRRGSSKIIVSCFLDTVTSAVEDFSKLVARMQSTGADIIKLVFNSTSITELSRIFHLL 1174
            K +    SK+IVSC+++      E+ S+LVA MQ+TGADIIKLV  + +ITEL RIFHL+
Sbjct: 117  KGTHHTGSKVIVSCYVNGDMPTKENLSQLVASMQATGADIIKLVSTANNITELDRIFHLI 176

Query: 1173 SHCQVPLIAYSTGERGLISQLLGPKFGCVFVYGSVQGNSVLGLPTLDSLRQAYGIEYVDA 994
             HCQVP+IAYS GERGLISQLL PKFG   +YGS++G+S+ GLPTLDSLR+AY + Y+++
Sbjct: 177  LHCQVPIIAYSVGERGLISQLLSPKFGGSLLYGSMEGSSIPGLPTLDSLREAYKVAYINS 236

Query: 993  DTKVFGLISKPVSHSKGPMLHNPTFRHIGFNGIYVPMLVDDLKEFFSVYSSPDFSGYSVG 814
            DTKVFGL+SKPVSHSKGP+LHNPTFRH  +NG YVPM VDDLKEFFSVYSSPDF+G+SVG
Sbjct: 237  DTKVFGLVSKPVSHSKGPLLHNPTFRHANYNGTYVPMFVDDLKEFFSVYSSPDFAGFSVG 296

Query: 813  IPYKEAVIEFCDEVHPLAQSIGAVNTIIRRSSDGKLVGYNTDCEASITAIEDALKVWGCT 634
             PYKEAV+EFCDEVHPLA+SIGAVNTIIRR  DGKL+G+NTDCEA+ITAIEDALK  G  
Sbjct: 297  FPYKEAVVEFCDEVHPLAKSIGAVNTIIRRPGDGKLIGHNTDCEAAITAIEDALKEQGYM 356

Query: 633  NGKASLPSPITGKQXXXXXXXXXXXXXXXXAKSRGARVVIFDISFDRAKSLAHAVSGEAW 454
            +G+ S  SP+TG+Q                AKSRGAR+VIFDI  +RAK LA AVSGEA 
Sbjct: 357  DGRTSSNSPLTGRQFVLVGAGGAGRALAFGAKSRGARIVIFDIDLERAKFLADAVSGEAQ 416

Query: 453  PYKDLASFLPEKGAILANATPIGMHPNTDRIPVAKVTLEDYKLVFDAVYTPRKTTLLREA 274
             ++++ +F PE GAILANATPIGMHPNT+RIPVA+ TL  Y+LVFDAVYTPRKT LL+EA
Sbjct: 417  LFENVVNFEPENGAILANATPIGMHPNTERIPVAEATLGIYQLVFDAVYTPRKTRLLKEA 476

Query: 273  ESAGTIIVSGVEMFLRQAIGQFNLFTGGKAPEEFMRGIVLAKF 145
            E+AG IIVSGVEMFLRQA+GQF+LFTG +AP EFMR IVLAKF
Sbjct: 477  EAAGAIIVSGVEMFLRQAMGQFSLFTGREAPTEFMREIVLAKF 519


>ref|XP_003520825.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
            dehydrogenase, chloroplastic-like [Glycine max]
          Length = 524

 Score =  555 bits (1429), Expect = e-155
 Identities = 281/395 (71%), Positives = 324/395 (82%)
 Frame = -1

Query: 1329 KIIVSCFLDTVTSAVEDFSKLVARMQSTGADIIKLVFNSTSITELSRIFHLLSHCQVPLI 1150
            KIIVSC++D  T   E   +LV  MQ+TGADIIKLV  +  ITE+ RIF L  +CQVPLI
Sbjct: 130  KIIVSCYVDGTTPPHEVLLQLVELMQATGADIIKLVTLAADITEIKRIFSLFLYCQVPLI 189

Query: 1149 AYSTGERGLISQLLGPKFGCVFVYGSVQGNSVLGLPTLDSLRQAYGIEYVDADTKVFGLI 970
            AYS GERGLISQLL PKFG  FVYGS+ GN + GLP+LDS+++AY +E+V+ADTKVFGLI
Sbjct: 190  AYSVGERGLISQLLSPKFGGFFVYGSLAGNPIPGLPSLDSIQEAYKLEHVNADTKVFGLI 249

Query: 969  SKPVSHSKGPMLHNPTFRHIGFNGIYVPMLVDDLKEFFSVYSSPDFSGYSVGIPYKEAVI 790
            SKPVSHS+GP+LHNP+F+ + +NGIYVPM VDDLK+FFS Y SPDFSG+SVGIPYKE V+
Sbjct: 250  SKPVSHSRGPILHNPSFKDVNYNGIYVPMFVDDLKKFFSTYPSPDFSGFSVGIPYKEEVL 309

Query: 789  EFCDEVHPLAQSIGAVNTIIRRSSDGKLVGYNTDCEASITAIEDALKVWGCTNGKASLPS 610
             FCDEVHPLAQSIGAVNTIIRR  DGKLVGYNTDCEA+ITAIEDAL   GC +G+ASL S
Sbjct: 310  RFCDEVHPLAQSIGAVNTIIRRPRDGKLVGYNTDCEAAITAIEDALIEHGCNDGEASLGS 369

Query: 609  PITGKQXXXXXXXXXXXXXXXXAKSRGARVVIFDISFDRAKSLAHAVSGEAWPYKDLASF 430
            P+ G+                 AKSRGAR+VIFDI FDRAKSLA AV GEA P+K+L +F
Sbjct: 370  PLAGRLFVLVGAGGAGKALAFGAKSRGARLVIFDIDFDRAKSLACAVFGEAQPFKELVNF 429

Query: 429  LPEKGAILANATPIGMHPNTDRIPVAKVTLEDYKLVFDAVYTPRKTTLLREAESAGTIIV 250
             PEKGAILANATP+GMHPNTDRIPVA+ TLEDY+LVFDAVYTPR+T LL EA++AG I V
Sbjct: 430  QPEKGAILANATPVGMHPNTDRIPVAEATLEDYRLVFDAVYTPRRTRLLNEADAAGAITV 489

Query: 249  SGVEMFLRQAIGQFNLFTGGKAPEEFMRGIVLAKF 145
            +GVEMFLRQAIGQFNLFTG +APEEFMR IVL+KF
Sbjct: 490  AGVEMFLRQAIGQFNLFTGLEAPEEFMREIVLSKF 524


>emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]
          Length = 1071

 Score =  547 bits (1410), Expect = e-153
 Identities = 276/411 (67%), Positives = 327/411 (79%), Gaps = 21/411 (5%)
 Frame = -1

Query: 1356 QKFSRRGSSKIIVSCFLDTVTSAVEDFSKLVARMQSTGADIIKLVFNSTSITELSRIFHL 1177
            QK  +  SS+ IVSC++D VT  +ED    VA +QSTGAD+IKLV N+T+ITE+++IFHL
Sbjct: 116  QKMDQHSSSRTIVSCYVDGVTPPIEDLICRVALLQSTGADMIKLVINATNITEITKIFHL 175

Query: 1176 LSHCQVPLIAYSTGERGLISQLLGPKFGCVFVYGSVQGNSVLGLPTLDSLRQAYGIEYVD 997
            LSHCQ+PLIAYS G+RG +SQ+L  KFG   VYGS++G+ V GLPTL+SLR+AY ++Y++
Sbjct: 176  LSHCQMPLIAYSIGDRGFMSQILCRKFGGFLVYGSMEGSPVAGLPTLESLREAYKVQYIN 235

Query: 996  ADTKVFGLISKPVSHSKGPMLHNPTFRHIGFNGIYVPMLVDDLKEFFSVYSSPDFSGYSV 817
             DTKVFGLISKPV HSKGP+LHNP FRH+ +NGIYVPMLVDDLKEFFS+YSSPDF+G+SV
Sbjct: 236  KDTKVFGLISKPVGHSKGPILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSV 295

Query: 816  GIPYKEAVIEFCDEVHPLAQSIGAVNTIIRRSSDGKLVGYNTDCEASITAIEDALKVWGC 637
            GIPYKEAV  FCDE+HPLAQSIGAVNTI+RR SDGKL+GYNTDCEASITAIEDAL+  G 
Sbjct: 296  GIPYKEAVTGFCDELHPLAQSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGL 355

Query: 636  TNGKASLPSPITGKQXXXXXXXXXXXXXXXXAKSRGARVVIFDISF-------------- 499
             NG+A L SP+TGKQ                A+SRGA++VIFD+ F              
Sbjct: 356  PNGEAPLNSPLTGKQFVLVGAGGAGRALAFGARSRGAQLVIFDLDFEKSIPGRITALLSN 415

Query: 498  -------DRAKSLAHAVSGEAWPYKDLASFLPEKGAILANATPIGMHPNTDRIPVAKVTL 340
                   DRA SLAHAVSGE   Y+D+A+F PEKGAILANATP+GMHPNTDRIPVA+ TL
Sbjct: 416  LHCSSPKDRANSLAHAVSGEVKLYEDVANFQPEKGAILANATPVGMHPNTDRIPVAEETL 475

Query: 339  EDYKLVFDAVYTPRKTTLLREAESAGTIIVSGVEMFLRQAIGQFNLFTGGK 187
             DY+LVFD+VYTPRKT LL+EAE+AG IIVSGVEMFLRQAIGQFNLFTGG+
Sbjct: 476  SDYQLVFDSVYTPRKTRLLKEAEAAGAIIVSGVEMFLRQAIGQFNLFTGGE 526



 Score =  324 bits (830), Expect = 4e-86
 Identities = 176/395 (44%), Positives = 246/395 (62%), Gaps = 4/395 (1%)
 Frame = -1

Query: 1329 KIIVSCFLDTVTSAVEDFSKLVARMQSTGADIIKLVFNSTSITELSRIFHLLSHCQVPLI 1150
            K+IVS      T + E    LVAR+Q++GADI+K+   +  IT+++R+  +  H QVP I
Sbjct: 677  KVIVSSHNFHNTPSTEAIGNLVARIQASGADIVKIATTALDITDVARVLQVTVHSQVPTI 736

Query: 1149 AYSTGERGLISQLLGPKFGCVFVYGSVQGNSVL--GLPTLDSLRQAYGIEYVDADTKVFG 976
            A   GERGLIS+LL PKFG    YG+++  ++   G PT   L   Y    +  DTKV+G
Sbjct: 737  AIVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKVYG 796

Query: 975  LISKPVSHSKGPMLHNPTFRHIGFNGIYVPMLVDDLKEFFSVYSSPDF-SGYSVGIPYKE 799
            +I KPV HSK P+L N  F+ +G N +YV +LVDD+++FF+ YS+PDF SG S  IP+KE
Sbjct: 797  IIGKPVGHSKSPLLFNAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPHKE 856

Query: 798  AVIEFCDEVHPLAQSIGAVNTIIRRSSDGKLVGYNTDCEASITAIEDALKVWGCTNGKA- 622
              I+  D + P+A+ IGA+N I+R+  DGKL  +NTD   +I AIED L+    +NG + 
Sbjct: 857  VAIKCMDTIDPIARKIGAINNIVRKP-DGKLTAFNTDYIGAIEAIEDGLRE---SNGSSP 912

Query: 621  SLPSPITGKQXXXXXXXXXXXXXXXXAKSRGARVVIFDISFDRAKSLAHAVSGEAWPYKD 442
            ++ SP+ GK                 AK +GARVV+ + +F+RAK LA  V G+A    +
Sbjct: 913  AVGSPLAGKLFVVLGAGGAGKSLAYGAKEKGARVVVANRTFERAKDLADKVGGQALTLAE 972

Query: 441  LASFLPEKGAILANATPIGMHPNTDRIPVAKVTLEDYKLVFDAVYTPRKTTLLREAESAG 262
            + +F PE+G ILAN T +GM P  +  P+ K  L+ Y LVFDA+YTP+ T LLREA+ +G
Sbjct: 973  IENFHPEEGMILANTTSVGMKPKINDTPIPKHALKHYSLVFDAIYTPKDTRLLREAKESG 1032

Query: 261  TIIVSGVEMFLRQAIGQFNLFTGGKAPEEFMRGIV 157
             IIV G EM +RQ   Q+  FTG  APEE  R ++
Sbjct: 1033 KIIVYGTEMLIRQGFEQYKNFTGLPAPEELFRELM 1067


Top