BLASTX nr result

ID: Panax21_contig00032591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032591
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138739.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate sy...    99   3e-19
ref|XP_002282428.2| PREDICTED: probable 1-deoxy-D-xylulose-5-pho...    96   3e-18
ref|XP_002514364.1| 1-deoxyxylulose-5-phosphate synthase, putati...    89   3e-16
ref|XP_002333970.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
gb|AEZ55687.1| putative 1-deoxy-D-xylulose 5-phosphate synthase ...    79   5e-13

>ref|XP_004138739.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
           gi|449499272|ref|XP_004160772.1| PREDICTED:
           1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
          Length = 717

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 52/104 (50%), Positives = 68/104 (65%)
 Frame = +1

Query: 217 MSTASAHNSFGISAHFHGNPRLSPSKLESSCVNFAANGEVFRMNLYPSSAFTCTSKGSVG 396
           M TAS    FG + H +GN  L   KLE S  NF    E  R+N    S F  +SK SV 
Sbjct: 1   MGTASTGYPFGTAVHSYGNSALLSRKLEFSRSNFPFPAEFSRINPNSGSVFHFSSKSSVC 60

Query: 397 RIYSLPDGDDFFSEKVPTPMLDTVENPMHLKNLSLKQLKRLVDD 528
           +I+SLPD D+ F +KVPTP+LD ++NP+HLKNLSLK+LK+L ++
Sbjct: 61  KIHSLPDIDNIFWDKVPTPLLDVIDNPIHLKNLSLKELKQLAEE 104


>ref|XP_002282428.2| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Vitis vinifera]
           gi|296081990|emb|CBI20995.3| unnamed protein product
           [Vitis vinifera]
          Length = 719

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 51/104 (49%), Positives = 68/104 (65%)
 Frame = +1

Query: 217 MSTASAHNSFGISAHFHGNPRLSPSKLESSCVNFAANGEVFRMNLYPSSAFTCTSKGSVG 396
           M TA A   F ++AHF    R+   K + S  NF    +  RMNLYP S+ T +SK  VG
Sbjct: 1   MGTACAQYPFEVTAHFQEKCRVLHPKTKFSSFNFPPKLDSSRMNLYPCSSSTTSSKRYVG 60

Query: 397 RIYSLPDGDDFFSEKVPTPMLDTVENPMHLKNLSLKQLKRLVDD 528
           +I SLP+  DFF +++PTPMLD VE+PM LKNL+ K+LK+L D+
Sbjct: 61  QICSLPEFGDFFWDRIPTPMLDMVESPMCLKNLTPKELKQLADE 104


>ref|XP_002514364.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
           gi|223546820|gb|EEF48318.1| 1-deoxyxylulose-5-phosphate
           synthase, putative [Ricinus communis]
          Length = 717

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 52/104 (50%), Positives = 61/104 (58%)
 Frame = +1

Query: 217 MSTASAHNSFGISAHFHGNPRLSPSKLESSCVNFAANGEVFRMNLYPSSAFTCTSKGSVG 396
           M TAS    +GI+AH           L SS  N      V   NLY  SA    SKG VG
Sbjct: 1   MGTASTQYPYGITAHSFAKFGHKLDTLSSSFPNKVGFSSV---NLYQGSASITNSKGFVG 57

Query: 397 RIYSLPDGDDFFSEKVPTPMLDTVENPMHLKNLSLKQLKRLVDD 528
           RI S+PD DD F EKVPTP+LD VENP+HL NL+L++LK L D+
Sbjct: 58  RICSVPDLDDIFWEKVPTPILDVVENPIHLNNLTLQELKELADE 101


>ref|XP_002333970.1| predicted protein [Populus trichocarpa] gi|222839426|gb|EEE77763.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 50/104 (48%), Positives = 63/104 (60%)
 Frame = +1

Query: 217 MSTASAHNSFGISAHFHGNPRLSPSKLESSCVNFAANGEVFRMNLYPSSAFTCTSKGSVG 396
           M TA A   +GI++H          KLE    N     E+ R NLYPSS  T  SK  VG
Sbjct: 1   MGTAIAQYPYGITSHSFVK---FGHKLEILSSNSHFKVEISRYNLYPSSVSTTNSKVCVG 57

Query: 397 RIYSLPDGDDFFSEKVPTPMLDTVENPMHLKNLSLKQLKRLVDD 528
           RI +LPD DD FS+ + TP+LD VENP+HLKNL++K+LK L  +
Sbjct: 58  RIRALPDIDDIFSDIIATPLLDVVENPIHLKNLTIKELKLLASE 101


>gb|AEZ55687.1| putative 1-deoxy-D-xylulose 5-phosphate synthase precursor [Salvia
           miltiorrhiza]
          Length = 713

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/104 (44%), Positives = 62/104 (59%)
 Frame = +1

Query: 217 MSTASAHNSFGISAHFHGNPRLSPSKLESSCVNFAANGEVFRMNLYPSSAFTCTSKGSVG 396
           M+ +S  N F ISA+  G+ R    K+E S VNF  N E  R+  Y S   TC   G  G
Sbjct: 1   MAASSCQNPFRISANLVGSSRFLLPKVELSVVNFPPNVEFSRLGFYRS--LTCKEYG--G 56

Query: 397 RIYSLPDGDDFFSEKVPTPMLDTVENPMHLKNLSLKQLKRLVDD 528
            ++   + D   +E+  TP+LD V+NPM+LKNLSLK+LK+L DD
Sbjct: 57  HVHCSSNTDGAVNEEALTPILDMVDNPMNLKNLSLKELKQLADD 100


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