BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032588
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   120   2e-25
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002325455.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...    92   4e-17
ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  120 bits (300), Expect = 2e-25
 Identities = 63/118 (53%), Positives = 75/118 (63%)
 Frame = -3

Query: 354 MSCLLPQFKCLPDSFSIHFKTHTSSQPSKYREPIFFRTQCSATVTTTVLDIPSLESHSNS 175
           MSCLLPQFKC PD+FS H K H   +  K RE I+FR QC+ + T+              
Sbjct: 1   MSCLLPQFKCPPDTFSTHPKLHILCKSPKNREAIYFRVQCALSTTSP------------- 47

Query: 174 VAANRPWSTSASTSTAVLDLEKFHLPSLEAHSSSAATNRPWTYIGAIGPPAEANFEAT 1
                P STS   +TAVLD+EK  LPSLE+HS+S A +RPWTYIG +GPP EANFEAT
Sbjct: 48  -----PLSTS---TTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEAT 97


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  117 bits (292), Expect = 1e-24
 Identities = 64/118 (54%), Positives = 75/118 (63%)
 Frame = -3

Query: 354 MSCLLPQFKCLPDSFSIHFKTHTSSQPSKYREPIFFRTQCSATVTTTVLDIPSLESHSNS 175
           MSCLLPQFKC PD+FS H K H  S   K RE I+FR QC+ + T+              
Sbjct: 1   MSCLLPQFKCPPDTFSTHPKLHILS---KNREAIYFRVQCALSTTSP------------- 44

Query: 174 VAANRPWSTSASTSTAVLDLEKFHLPSLEAHSSSAATNRPWTYIGAIGPPAEANFEAT 1
                P STS   +TAVLD+EK  LPSLE+HS+S A +RPWTYIG +GPP EANFEAT
Sbjct: 45  -----PLSTS---TTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEAT 94


>ref|XP_002325455.1| predicted protein [Populus trichocarpa] gi|222862330|gb|EEE99836.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/115 (50%), Positives = 62/115 (53%)
 Frame = -3

Query: 354 MSCLLPQFKCLPDSFSIHFKTHTSSQPSKYREPIFFRTQCSATVTTTVLDIPSLESHSNS 175
           MSCLLPQFKC PDSFSIH             EP  FR QC+ +                 
Sbjct: 1   MSCLLPQFKCQPDSFSIHSNG----------EPFCFRAQCALS----------------- 33

Query: 174 VAANRPWSTSASTSTAVLDLEKFHLPSLEAHSSSAATNRPWTYIGAIGPPAEANF 10
                  S S STSTAVL+LEK  LPSLE+HS S A NRPWTYIG IGPP E  F
Sbjct: 34  -------SASPSTSTAVLNLEKLRLPSLESHSDSIAANRPWTYIGGIGPPKEPLF 81


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
           gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
           rpoD1, putative [Ricinus communis]
          Length = 569

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 52/108 (48%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
 Frame = -3

Query: 354 MSCLLPQFKCLPDSFSIHFKTH-----TSSQPSKYREPIFFRTQCSATVTTTVLDIPSLE 190
           MSCLLPQFKC PD+FSIHF+ +       +Q +K REPI++R QC  +            
Sbjct: 2   MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILS------------ 49

Query: 189 SHSNSVAANRPWSTSASTSTAVLDLEKFHLPSLEAHSSSAATNRPWTY 46
                       +TS STSTAVLDLEK  LPS EA S S A N PWTY
Sbjct: 50  ------------TTSPSTSTAVLDLEKLRLPSFEAPSDSIAPNSPWTY 85


>ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|222858122|gb|EEE95669.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 51/116 (43%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = -3

Query: 354 MSCLLPQFKCLPDSFSIHFKTHTSSQPSKYREPIFFRTQCSATVTTTVLDIPSLESH-SN 178
           MSCLLPQFKC PD+FS+HF+                                +L+ H +N
Sbjct: 1   MSCLLPQFKCQPDTFSVHFR--------------------------------NLQHHGTN 28

Query: 177 SVAANRPWSTSASTSTAVLDLEKFHLPSLEAHSSSAATNRPWTYIGAIGPPAEANF 10
                +   +SAS STAVLDLEK  LPSLE HS S + NRPWTYIG IGP  +  F
Sbjct: 29  HTQLPQCVLSSASPSTAVLDLEKLRLPSLEPHSDSISANRPWTYIGGIGPQKKPPF 84