BLASTX nr result

ID: Panax21_contig00032550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032550
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]         137   1e-30
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   137   1e-30
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   135   4e-30
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             135   4e-30
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   135   4e-30

>emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 544

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/164 (40%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
 Frame = +2

Query: 62  QENNNHVWYLDSGASKHMTGNKDLFSTLVESNFGQIKIGDARAYTIKGVEEVTFKTKSGK 241
           ++  NH WYLDSGAS HM G K +F+ L ES  G + +GD     +KG   +  + K+G 
Sbjct: 344 EQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGD 403

Query: 242 FEKMSDVYFVPGIKSNLLSTGQLLRKGFDIFFHD-KLCTLSKNNQVVAKISLAENNLFPL 418
            + +S+VY++P +K+N+LS GQLL KG+DI   D  L    K + ++ K+ +++N +F L
Sbjct: 404 HQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKNRMFVL 463

Query: 419 PLQVENFHCFAGFNEEVSKLWHDRYGHLNFDSLKLLAVKGMVNG 550
            ++ +   C     +E S LWH R+GHLNF  L+LL+ K MV G
Sbjct: 464 NIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRG 507


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
           thaliana]
          Length = 1272

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/164 (40%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
 Frame = +2

Query: 62  QENNNHVWYLDSGASKHMTGNKDLFSTLVESNFGQIKIGDARAYTIKGVEEVTFKTKSGK 241
           ++  NH WYLDSGAS HM G K +F+ L ES  G + +GD     +KG   +  + K+G 
Sbjct: 328 EQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGD 387

Query: 242 FEKMSDVYFVPGIKSNLLSTGQLLRKGFDIFFHD-KLCTLSKNNQVVAKISLAENNLFPL 418
            + +S+VY++P +K+N+LS GQLL KG+DI   D  L    K + ++ K+ +++N +F L
Sbjct: 388 HQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKNRMFVL 447

Query: 419 PLQVENFHCFAGFNEEVSKLWHDRYGHLNFDSLKLLAVKGMVNG 550
            ++ +   C     +E S LWH R+GHLNF  L+LL+ K MV G
Sbjct: 448 NIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRG 491


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  135 bits (340), Expect = 4e-30
 Identities = 66/164 (40%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
 Frame = +2

Query: 62  QENNNHVWYLDSGASKHMTGNKDLFSTLVESNFGQIKIGDARAYTIKGVEEVTFKTKSGK 241
           ++  NH WYLDSGAS HM G K +F+ L ES  G + +GD     +KG   +  + K+G 
Sbjct: 328 EQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGD 387

Query: 242 FEKMSDVYFVPGIKSNLLSTGQLLRKGFDIFFHD-KLCTLSKNNQVVAKISLAENNLFPL 418
            + +S+VY++P +K+N+LS GQLL KG+DI   D  L    + + ++ K+ +++N +F L
Sbjct: 388 HQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVL 447

Query: 419 PLQVENFHCFAGFNEEVSKLWHDRYGHLNFDSLKLLAVKGMVNG 550
            ++ +   C     +E S LWH R+GHLNF  L+LL+ K MV G
Sbjct: 448 NIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRG 491


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  135 bits (340), Expect = 4e-30
 Identities = 66/164 (40%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
 Frame = +2

Query: 62  QENNNHVWYLDSGASKHMTGNKDLFSTLVESNFGQIKIGDARAYTIKGVEEVTFKTKSGK 241
           ++  NH WYLDSGAS HM G K +F+ L ES  G + +GD     +KG   +  + K+G 
Sbjct: 290 EQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGD 349

Query: 242 FEKMSDVYFVPGIKSNLLSTGQLLRKGFDIFFHD-KLCTLSKNNQVVAKISLAENNLFPL 418
            + +S+VY++P +K+N+LS GQLL KG+DI   D  L    + + ++ K+ +++N +F L
Sbjct: 350 HQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVL 409

Query: 419 PLQVENFHCFAGFNEEVSKLWHDRYGHLNFDSLKLLAVKGMVNG 550
            ++ +   C     +E S LWH R+GHLNF  L+LL+ K MV G
Sbjct: 410 NIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRG 453


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  135 bits (340), Expect = 4e-30
 Identities = 66/164 (40%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
 Frame = +2

Query: 62  QENNNHVWYLDSGASKHMTGNKDLFSTLVESNFGQIKIGDARAYTIKGVEEVTFKTKSGK 241
           ++  NH WYLDSGAS HM G K +F+ L ES  G + +GD     +KG   +  + K+G 
Sbjct: 328 EQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGD 387

Query: 242 FEKMSDVYFVPGIKSNLLSTGQLLRKGFDIFFHD-KLCTLSKNNQVVAKISLAENNLFPL 418
            + +S+VY++P +K+N+LS GQLL KG+DI   D  L    + + ++ K+ +++N +F L
Sbjct: 388 HQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVL 447

Query: 419 PLQVENFHCFAGFNEEVSKLWHDRYGHLNFDSLKLLAVKGMVNG 550
            ++ +   C     +E S LWH R+GHLNF  L+LL+ K MV G
Sbjct: 448 NIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRG 491


Top