BLASTX nr result

ID: Panax21_contig00032533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032533
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267902.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...   150   1e-34
ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   149   3e-34
ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...   149   3e-34
emb|CBI29262.3| unnamed protein product [Vitis vinifera]              147   7e-34
gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron...   146   2e-33

>ref|XP_002267902.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Vitis
           vinifera]
          Length = 815

 Score =  150 bits (378), Expect = 1e-34
 Identities = 76/151 (50%), Positives = 98/151 (64%), Gaps = 21/151 (13%)
 Frame = +3

Query: 69  MAQVSQLPCDGDGICMLCKIKPSDEEKLTCNTCVTPWHVSCLAVRPETL--------AST 224
           MA  S LPCDGDG+CM+C+ KPSD+E +TC TC TPWHV+CL+VRPETL        A  
Sbjct: 1   MAHGSDLPCDGDGVCMICRRKPSDDESITCKTCATPWHVTCLSVRPETLADALQWQVADA 60

Query: 225 LQWDCPDCTTLTS-------AARALSSVSAGENGELIAAIRAIESDASLTEKQKAKRRQE 383
           LQW+CPDC+           +  A+++  +  +G+LIAAIRAIESD SLTE++KAKRRQE
Sbjct: 61  LQWECPDCSPAVGERDPPEVSETAVAAGGSEGSGDLIAAIRAIESDGSLTEQEKAKRRQE 120

Query: 384 ILSG------PDXXXXXXXXXXXXDILDIID 458
           +LSG      P+            D+LDI+D
Sbjct: 121 LLSGTVRSGSPEEGSPNKRKNGGRDVLDILD 151


>ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ORTHRUS
           2-like [Cucumis sativus]
          Length = 688

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/111 (62%), Positives = 84/111 (75%), Gaps = 4/111 (3%)
 Frame = +3

Query: 75  QVSQLPCDGDGICMLCKIKPSDEEKLTCNTCVTPWHVSCLAVRPETLASTLQWDCPDCTT 254
           QV+QLPCDGDGICMLCK KPSD E +TC TCVTPWHVSCL+  PETLASTLQWDCPDC+T
Sbjct: 21  QVTQLPCDGDGICMLCKAKPSDVETITCKTCVTPWHVSCLSSPPETLASTLQWDCPDCST 80

Query: 255 ----LTSAARALSSVSAGENGELIAAIRAIESDASLTEKQKAKRRQEILSG 395
               +        S     + +L+ +IRAIE+D SLT+++KA +RQE+LSG
Sbjct: 81  PPEDVILPPPGNHSFPTAPSSDLVTSIRAIEADVSLTDREKANKRQELLSG 131


>ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis
           sativus]
          Length = 667

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/111 (62%), Positives = 84/111 (75%), Gaps = 4/111 (3%)
 Frame = +3

Query: 75  QVSQLPCDGDGICMLCKIKPSDEEKLTCNTCVTPWHVSCLAVRPETLASTLQWDCPDCTT 254
           QV+QLPCDGDGICMLCK KPSD E +TC TCVTPWHVSCL+  PETLASTLQWDCPDC+T
Sbjct: 21  QVTQLPCDGDGICMLCKAKPSDVETITCKTCVTPWHVSCLSSPPETLASTLQWDCPDCST 80

Query: 255 ----LTSAARALSSVSAGENGELIAAIRAIESDASLTEKQKAKRRQEILSG 395
               +        S     + +L+ +IRAIE+D SLT+++KA +RQE+LSG
Sbjct: 81  PPEDVILPPPGNHSFPTAPSSDLVTSIRAIEADVSLTDREKANKRQELLSG 131


>emb|CBI29262.3| unnamed protein product [Vitis vinifera]
          Length = 803

 Score =  147 bits (372), Expect = 7e-34
 Identities = 75/144 (52%), Positives = 92/144 (63%), Gaps = 14/144 (9%)
 Frame = +3

Query: 69  MAQVSQLPCDGDGICMLCKIKPSDEEKLTCNTCVTPWHVSCLAVRPETL--------AST 224
           MA  S LPCDGDG+CM+C+ KPSD+E +TC TC TPWHV+CL+VRPETL        A  
Sbjct: 1   MAHGSDLPCDGDGVCMICRRKPSDDESITCKTCATPWHVTCLSVRPETLADALQWQVADA 60

Query: 225 LQWDCPDCTTLTSAARALSSVSAGENGELIAAIRAIESDASLTEKQKAKRRQEILSG--- 395
           LQW+CPDC+                +G+LIAAIRAIESD SLTE++KAKRRQE+LSG   
Sbjct: 61  LQWECPDCSPAVGERDPPEG-----SGDLIAAIRAIESDGSLTEQEKAKRRQELLSGTVR 115

Query: 396 ---PDXXXXXXXXXXXXDILDIID 458
              P+            D+LDI+D
Sbjct: 116 SGSPEEGSPNKRKNGGRDVLDILD 139


>gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron tulipifera]
          Length = 713

 Score =  146 bits (368), Expect = 2e-33
 Identities = 66/110 (60%), Positives = 86/110 (78%), Gaps = 1/110 (0%)
 Frame = +3

Query: 69  MAQVSQLPCDGDGICMLCKIKPSDEEKLTCNTCVTPWHVSCLAVRPETLASTLQWDCPDC 248
           MA  S LPCDGDGICMLCK  PSDEEKL CNTC TPWHV CL+  P++L+STLQW+CPDC
Sbjct: 1   MAHDSDLPCDGDGICMLCKKSPSDEEKLLCNTCATPWHVPCLSSPPQSLSSTLQWNCPDC 60

Query: 249 TTLTSA-ARALSSVSAGENGELIAAIRAIESDASLTEKQKAKRRQEILSG 395
           +   S  ++   SV+   + +LI+A+RAIE+D SL +++KA+RRQE++SG
Sbjct: 61  SPAPSVDSKPAPSVAGSLSNDLISAVRAIEADESLNDEEKARRRQELMSG 110


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