BLASTX nr result

ID: Panax21_contig00032513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032513
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat...   290   2e-76
emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]   290   2e-76
ref|XP_002302938.1| predicted protein [Populus trichocarpa] gi|2...   285   1e-74
ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat...   284   2e-74
ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat...   284   2e-74

>ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera] gi|296087085|emb|CBI33459.3|
           unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  290 bits (742), Expect = 2e-76
 Identities = 141/253 (55%), Positives = 185/253 (73%)
 Frame = +3

Query: 18  THHHFLSPPQLHHLYYTAASTAWYTPPPSNHQHDSDPIITTLSEAINNAQTKPLHTSLKK 197
           T  +FLS P+   L ++     W TPP S   H  DPI+TT+SEAI  + TKPLH+SLK+
Sbjct: 8   TTRNFLSSPRGGFLCFST----WMTPPTS---HCHDPILTTISEAIKVSPTKPLHSSLKR 60

Query: 198 LLPSLKAHHLINLINFNPCSLPPQSLFSLFTWLSSQPSFRHTLNSYCTMANYLSSHQMLP 377
           +LPSL  +HLI+LIN NP SL P SL S F WLS+Q  FR +++SYCTM ++L +H+ML 
Sbjct: 61  ILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLS 120

Query: 378 QAKSLIQLVISRKGKNSASSVFAAMLETKGIHQSNFVINALMDGYLDYGFISDAIQCFKL 557
           +A+SL+Q V+SRKGKNSASSVF ++LE +G HQSN V + LM+ Y D G+ SDAIQCF+L
Sbjct: 121 EAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRL 180

Query: 558 IRKHKICFPFQSCGRLLDHMMKSNSPASTWAFYSEILECGFPANVYNFNILMHKMCKEGK 737
           +RKH +  PF SCG L D +MK N  +  WAFY EIL+CG+P +V  FN+LMH++CKE K
Sbjct: 181 VRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHK 240

Query: 738 LEEAQLIFEEMRK 776
           + EAQL+F E+ K
Sbjct: 241 INEAQLLFGEIGK 253


>emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  290 bits (742), Expect = 2e-76
 Identities = 141/253 (55%), Positives = 185/253 (73%)
 Frame = +3

Query: 18  THHHFLSPPQLHHLYYTAASTAWYTPPPSNHQHDSDPIITTLSEAINNAQTKPLHTSLKK 197
           T  +FLS P+   L ++     W TPP S   H  DPI+TT+SEAI  + TKPLH+SLK+
Sbjct: 8   TTRNFLSSPRGGFLCFST----WMTPPTS---HCHDPILTTISEAIKVSPTKPLHSSLKR 60

Query: 198 LLPSLKAHHLINLINFNPCSLPPQSLFSLFTWLSSQPSFRHTLNSYCTMANYLSSHQMLP 377
           +LPSL  +HLI+LIN NP SL P SL S F WLS+Q  FR +++SYCTM ++L +H+ML 
Sbjct: 61  ILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLS 120

Query: 378 QAKSLIQLVISRKGKNSASSVFAAMLETKGIHQSNFVINALMDGYLDYGFISDAIQCFKL 557
           +A+SL+Q V+SRKGKNSASSVF ++LE +G HQSN V + LM+ Y D G+ SDAIQCF+L
Sbjct: 121 EAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRL 180

Query: 558 IRKHKICFPFQSCGRLLDHMMKSNSPASTWAFYSEILECGFPANVYNFNILMHKMCKEGK 737
           +RKH +  PF SCG L D +MK N  +  WAFY EIL+CG+P +V  FN+LMH++CKE K
Sbjct: 181 VRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHK 240

Query: 738 LEEAQLIFEEMRK 776
           + EAQL+F E+ K
Sbjct: 241 INEAQLLFGEIGK 253


>ref|XP_002302938.1| predicted protein [Populus trichocarpa] gi|222844664|gb|EEE82211.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score =  285 bits (728), Expect = 1e-74
 Identities = 141/264 (53%), Positives = 188/264 (71%), Gaps = 7/264 (2%)
 Frame = +3

Query: 6   KISKTHHHFLSPPQLHHLYYTAASTAWYTPPPSNHQHDS-------DPIITTLSEAINNA 164
           K+ KTH   LSPP+        A + WY+PPP      S        PI+TT+SEAI N 
Sbjct: 5   KLPKTH---LSPPKT-----LCAFSTWYSPPPQPPPRQSPPPSRHESPILTTISEAIKNI 56

Query: 165 QTKPLHTSLKKLLPSLKAHHLINLINFNPCSLPPQSLFSLFTWLSSQPSFRHTLNSYCTM 344
           +TKPLH SLK +LPS KAHH I+L+N NP  LPP+SL S F +LSS P+F HT+ SYC+M
Sbjct: 57  ETKPLHISLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSYPTFSHTVQSYCSM 116

Query: 345 ANYLSSHQMLPQAKSLIQLVISRKGKNSASSVFAAMLETKGIHQSNFVINALMDGYLDYG 524
            ++L +H+M  QA+SL+  V+SRKGK SASSVFA++LETKG   S+FV +ALM  Y ++G
Sbjct: 117 VHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFG 176

Query: 525 FISDAIQCFKLIRKHKICFPFQSCGRLLDHMMKSNSPASTWAFYSEILECGFPANVYNFN 704
           ++SDAIQCF+L +KH +  PF  C  LL+ M+K +SP     FY EIL+ G+P NVY FN
Sbjct: 177 YVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFN 236

Query: 705 ILMHKMCKEGKLEEAQLIFEEMRK 776
           +LM+++CKEGK+++AQLIF+E+RK
Sbjct: 237 VLMNRLCKEGKVKDAQLIFDEIRK 260


>ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  284 bits (726), Expect = 2e-74
 Identities = 141/250 (56%), Positives = 179/250 (71%)
 Frame = +3

Query: 27  HFLSPPQLHHLYYTAASTAWYTPPPSNHQHDSDPIITTLSEAINNAQTKPLHTSLKKLLP 206
           H +S  +   LY T     W++PPP      +DP++  +S AINNAQTKPL +SL++LLP
Sbjct: 9   HSISLSKPSFLYST-----WHSPPPPAVL--ADPVLAAVSTAINNAQTKPLASSLRRLLP 61

Query: 207 SLKAHHLINLINFNPCSLPPQSLFSLFTWLSSQPSFRHTLNSYCTMANYLSSHQMLPQAK 386
           S K HH I+LIN NP SL P SLFS F WLSS P+FRHT  SYC MAN+LS+HQM  + +
Sbjct: 62  SFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQ 121

Query: 387 SLIQLVISRKGKNSASSVFAAMLETKGIHQSNFVINALMDGYLDYGFISDAIQCFKLIRK 566
           S+I+ ++SRKGK+SA+SVFAA+L+T G   SNFV +ALM  Y D GF+SDAIQCF+L+R 
Sbjct: 122 SIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181

Query: 567 HKICFPFQSCGRLLDHMMKSNSPASTWAFYSEILECGFPANVYNFNILMHKMCKEGKLEE 746
                PF  CG LLD M+ SNSP + W FYSEILE GFP  V  +NIL++K CKEG + +
Sbjct: 182 SNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRD 241

Query: 747 AQLIFEEMRK 776
           A+LIF E+RK
Sbjct: 242 AKLIFNEIRK 251


>ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  284 bits (726), Expect = 2e-74
 Identities = 141/250 (56%), Positives = 179/250 (71%)
 Frame = +3

Query: 27  HFLSPPQLHHLYYTAASTAWYTPPPSNHQHDSDPIITTLSEAINNAQTKPLHTSLKKLLP 206
           H +S  +   LY T     W++PPP      +DP++  +S AINNAQTKPL +SL++LLP
Sbjct: 9   HSISLSKPSFLYST-----WHSPPPLAAL--ADPVLAAVSTAINNAQTKPLASSLRRLLP 61

Query: 207 SLKAHHLINLINFNPCSLPPQSLFSLFTWLSSQPSFRHTLNSYCTMANYLSSHQMLPQAK 386
           S K HH I+LIN NP SL P SLFS F WLSS P+FRHT  SYC MAN+LS+HQM  + +
Sbjct: 62  SFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQ 121

Query: 387 SLIQLVISRKGKNSASSVFAAMLETKGIHQSNFVINALMDGYLDYGFISDAIQCFKLIRK 566
           S+I+ ++SRKGK+SA+SVFAA+L+T G   SNFV +ALM  Y D GF+SDAIQCF+L+R 
Sbjct: 122 SIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181

Query: 567 HKICFPFQSCGRLLDHMMKSNSPASTWAFYSEILECGFPANVYNFNILMHKMCKEGKLEE 746
                PF  CG LLD M+ SNSP + W FYSEILE GFP  V  +NIL++K CKEG + +
Sbjct: 182 SNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRD 241

Query: 747 AQLIFEEMRK 776
           A+LIF E+RK
Sbjct: 242 AKLIFNEIRK 251


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