BLASTX nr result

ID: Panax21_contig00032477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032477
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509846.1| conserved hypothetical protein [Ricinus comm...    67   4e-09
ref|XP_002303603.1| predicted protein [Populus trichocarpa] gi|2...    67   6e-09
ref|XP_002299514.1| predicted protein [Populus trichocarpa] gi|2...    64   4e-08
ref|XP_002273128.2| PREDICTED: uncharacterized protein LOC100251...    62   2e-07
ref|XP_003611067.1| hypothetical protein MTR_5g010050 [Medicago ...    58   3e-06

>ref|XP_002509846.1| conserved hypothetical protein [Ricinus communis]
           gi|223549745|gb|EEF51233.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 326

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
 Frame = -1

Query: 428 RTICSKAPKGLALTTSPFRKTGQLEHVLMKRAQKYECMKIYTKNRPYEDHNRLHAVIXXX 249
           RTIC KA  GL   + PF+++  L    MK  +   C +  T N+ + ++ RL+ V+   
Sbjct: 14  RTICFKARSGLMPGSIPFKRSSDLVQKFMKAERWGICFRKQTWNKQF-NYQRLNLVMSSA 72

Query: 248 XXXXXXXSD------TVEQFYECINKKNLKKLGKFISNDCYLEDFSFPKPFQGRKVV 96
                   +       +++FY CIN+K L+++ K+IS++C  ED SF  P QG+K V
Sbjct: 73  ADDGNIPLNHISAASMIKKFYTCINEKRLEEIDKYISDNCCFEDCSFYSPIQGKKEV 129


>ref|XP_002303603.1| predicted protein [Populus trichocarpa] gi|222841035|gb|EEE78582.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
 Frame = -1

Query: 428 RTICSKAPKGLALTTSPFRKTGQLEHVLMKRAQKYECMKIYTKNRPYED---HNRLHAVI 258
           +TI  K   GL L +SPF+ + QL    +K  Q+  C++    N+ +     +  + A  
Sbjct: 14  QTISLKGVAGLTLASSPFKGSCQLMLSNVKMEQQVACLRKQVNNKLFNKRWVNLVVSAAA 73

Query: 257 XXXXXXXXXXSDTVEQFYECINKKNLKKLGKFISNDCYLEDFSFPKPFQGRKVVSSILKL 78
                     S+ ++QFY CIN K LK+L  +IS DC+ ED SF +P QG++ V    + 
Sbjct: 74  DFDLKLGSSPSNMIKQFYTCINDKKLKELDGYISEDCHFEDCSFLQPMQGKREVMHFFRQ 133

Query: 77  L 75
           L
Sbjct: 134 L 134


>ref|XP_002299514.1| predicted protein [Populus trichocarpa] gi|222846772|gb|EEE84319.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
 Frame = -1

Query: 428 RTICSKAPKGLALTTSPFRKTGQLEHVLMKRAQKYECMKIYTKNRPYED---HNRLHAVI 258
           +TIC +   GL    SPF+ + Q     M+   K  C++    N+ +     +  + A  
Sbjct: 14  QTICPEGVAGLTFGFSPFKGSSQS----MQNKMKITCLRKRASNKSFNKRWANMVVSAAD 69

Query: 257 XXXXXXXXXXSDTVEQFYECINKKNLKKLGKFISNDCYLEDFSFPKPFQGRKVV 96
                     S  ++QFY CIN+K LK+L  +IS+DC+ ED SF +P QG+K V
Sbjct: 70  DFDFKLGPSPSHMIKQFYTCINEKKLKELDGYISDDCFFEDCSFLQPMQGKKEV 123


>ref|XP_002273128.2| PREDICTED: uncharacterized protein LOC100251848 [Vitis vinifera]
          Length = 228

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
 Frame = -1

Query: 401 GLALTTSPFRKTGQLEHVLMKRAQKYECMKIYTKNRPYEDHNRLHAVIXXXXXXXXXXS- 225
           GLAL++ P +   QL+       Q+   +K   KN+       L+  +          S 
Sbjct: 17  GLALSSLPMKTACQLKQNRAMTMQQGISIKSMKKNKT--KFRGLYLAVQRRSNSYFGSSG 74

Query: 224 ----DTVEQFYECINKKNLKKLGKFISNDCYLEDFSFPKPFQGRKVV 96
               +T+E FY CIN KNLK+L K +S+DC   D SFP+PF+G+K V
Sbjct: 75  PFPSETIELFYTCINDKNLKQLAKLVSDDCCFNDLSFPQPFKGKKEV 121


>ref|XP_003611067.1| hypothetical protein MTR_5g010050 [Medicago truncatula]
           gi|355512402|gb|AES94025.1| hypothetical protein
           MTR_5g010050 [Medicago truncatula]
          Length = 249

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
 Frame = -1

Query: 404 KGLALTTSPFRKTGQLEHVLMKRAQKYECMKIYTKNRPYEDHNRLHAVIXXXXXXXXXXS 225
           K L L+ SP + T  L H  ++  Q+  C+K   KN  + D NR+ A++          S
Sbjct: 24  KRLTLSFSPRKTTCNL-HKKIEIQQRSICVK-NVKNGTW-DSNRISAILSKRGPKSGKNS 80

Query: 224 ----DTVEQFYECINKKNLKKLGKFISNDCYLEDFSFPKPFQGRKVVSSILKLL 75
               + V+ FY CIN+K LK+L ++IS D    D++F  PFQG+K V   L+ L
Sbjct: 81  MSPAEIVDHFYTCINEKELKQLDEYISQDACFYDYTFINPFQGKKEVMHFLQQL 134


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