BLASTX nr result
ID: Panax21_contig00032475
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00032475 (399 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|2... 107 1e-21 ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|2... 99 4e-19 ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma... 97 2e-18 ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma... 96 2e-18 emb|CBI35689.3| unnamed protein product [Vitis vinifera] 96 2e-18 >ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|222847981|gb|EEE85528.1| predicted protein [Populus trichocarpa] Length = 967 Score = 107 bits (266), Expect = 1e-21 Identities = 52/70 (74%), Positives = 58/70 (82%) Frame = +3 Query: 3 GLTWDEAKIQAADKALGSLRSMLGHFSHKRQGSPRLLQGMSNNRLKPEFTGVQQRFPSSA 182 GLTWDEAK+QAA+KALGSLR+M G ++ KRQGSPRL+QGM N RLK EF V QR PSSA Sbjct: 898 GLTWDEAKMQAAEKALGSLRTMFGQYTPKRQGSPRLMQGMPNKRLKQEFPRVLQRMPSSA 957 Query: 183 RYPNNASPVP 212 RY NASPVP Sbjct: 958 RYHKNASPVP 967 >ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|222870825|gb|EEF07956.1| predicted protein [Populus trichocarpa] Length = 224 Score = 99.0 bits (245), Expect = 4e-19 Identities = 48/70 (68%), Positives = 54/70 (77%) Frame = +3 Query: 3 GLTWDEAKIQAADKALGSLRSMLGHFSHKRQGSPRLLQGMSNNRLKPEFTGVQQRFPSSA 182 G TWDEAK+QAA+KALGSLR+M G ++ KRQGSPR +QGM N RLK EF V QR P SA Sbjct: 155 GSTWDEAKMQAAEKALGSLRTMFGQYTQKRQGSPRPMQGMPNKRLKQEFPRVLQRMPPSA 214 Query: 183 RYPNNASPVP 212 RY NA PVP Sbjct: 215 RYHKNAPPVP 224 >ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1-like [Glycine max] Length = 954 Score = 96.7 bits (239), Expect = 2e-18 Identities = 48/70 (68%), Positives = 52/70 (74%) Frame = +3 Query: 3 GLTWDEAKIQAADKALGSLRSMLGHFSHKRQGSPRLLQGMSNNRLKPEFTGVQQRFPSSA 182 GLTWDEAK+QAA+KALGSLRS LG KRQ SPR QG SN RLK E+ QR PSSA Sbjct: 885 GLTWDEAKMQAAEKALGSLRSKLGQSIQKRQSSPRPHQGFSNKRLKQEYPRPMQRMPSSA 944 Query: 183 RYPNNASPVP 212 RYP NA P+P Sbjct: 945 RYPRNAPPIP 954 >ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1 [Vitis vinifera] Length = 860 Score = 96.3 bits (238), Expect = 2e-18 Identities = 50/70 (71%), Positives = 54/70 (77%) Frame = +3 Query: 3 GLTWDEAKIQAADKALGSLRSMLGHFSHKRQGSPRLLQGMSNNRLKPEFTGVQQRFPSSA 182 G TWD+AK+QAA+KALGSL+SMLG FS KRQGSPR LQGM RLK EFT QR PSS Sbjct: 792 GSTWDDAKMQAAEKALGSLKSMLGQFSQKRQGSPRSLQGM-GKRLKSEFTRGLQRTPSSG 850 Query: 183 RYPNNASPVP 212 RY N SPVP Sbjct: 851 RYSKNTSPVP 860 >emb|CBI35689.3| unnamed protein product [Vitis vinifera] Length = 160 Score = 96.3 bits (238), Expect = 2e-18 Identities = 50/70 (71%), Positives = 54/70 (77%) Frame = +3 Query: 3 GLTWDEAKIQAADKALGSLRSMLGHFSHKRQGSPRLLQGMSNNRLKPEFTGVQQRFPSSA 182 G TWD+AK+QAA+KALGSL+SMLG FS KRQGSPR LQGM RLK EFT QR PSS Sbjct: 92 GSTWDDAKMQAAEKALGSLKSMLGQFSQKRQGSPRSLQGM-GKRLKSEFTRGLQRTPSSG 150 Query: 183 RYPNNASPVP 212 RY N SPVP Sbjct: 151 RYSKNTSPVP 160