BLASTX nr result

ID: Panax21_contig00032472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032472
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285144.1| PREDICTED: uncharacterized protein LOC100263...    87   2e-15
ref|XP_003539713.1| PREDICTED: uncharacterized protein LOC100787...    82   5e-14
ref|XP_003538205.1| PREDICTED: uncharacterized protein LOC100306...    82   5e-14
ref|XP_002879096.1| hypothetical protein ARALYDRAFT_901664 [Arab...    79   3e-13
ref|XP_003538206.1| PREDICTED: uncharacterized protein LOC100306...    78   7e-13

>ref|XP_002285144.1| PREDICTED: uncharacterized protein LOC100263969 [Vitis vinifera]
           gi|297746256|emb|CBI16312.3| unnamed protein product
           [Vitis vinifera]
          Length = 85

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/61 (68%), Positives = 49/61 (80%)
 Frame = -2

Query: 396 VFEQRRSVYKTISDNQSQLVSQSQIRESILGKKSRLKFAHLWNKAVDQTFGPVITSLSSR 217
           VFEQR+ +YK+I+D QSQL  QS   E I GKKSRL+FAHLWNK VD+T GPVI +LSSR
Sbjct: 24  VFEQRKCIYKSIADTQSQLDPQSLKTEPIFGKKSRLEFAHLWNKTVDKTLGPVIAALSSR 83

Query: 216 G 214
           G
Sbjct: 84  G 84


>ref|XP_003539713.1| PREDICTED: uncharacterized protein LOC100787578 [Glycine max]
          Length = 87

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/61 (67%), Positives = 48/61 (78%)
 Frame = -2

Query: 396 VFEQRRSVYKTISDNQSQLVSQSQIRESILGKKSRLKFAHLWNKAVDQTFGPVITSLSSR 217
           VFEQRR +Y +ISD      SQSQ++E I GKKSR +F+HLWNK VDQTFGP+I SLSSR
Sbjct: 24  VFEQRRYIYASISD------SQSQVKEPIFGKKSRSEFSHLWNKTVDQTFGPLIKSLSSR 77

Query: 216 G 214
           G
Sbjct: 78  G 78


>ref|XP_003538205.1| PREDICTED: uncharacterized protein LOC100306159 isoform 1 [Glycine
           max] gi|255627729|gb|ACU14209.1| unknown [Glycine max]
          Length = 79

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/61 (67%), Positives = 48/61 (78%)
 Frame = -2

Query: 396 VFEQRRSVYKTISDNQSQLVSQSQIRESILGKKSRLKFAHLWNKAVDQTFGPVITSLSSR 217
           VFEQRR +Y +ISD      SQSQ++E I GKKSR +FAH+WNK VDQTFGP+I SLSSR
Sbjct: 24  VFEQRRYIYASISD------SQSQVKEPIFGKKSRSEFAHVWNKTVDQTFGPLIKSLSSR 77

Query: 216 G 214
           G
Sbjct: 78  G 78


>ref|XP_002879096.1| hypothetical protein ARALYDRAFT_901664 [Arabidopsis lyrata subsp.
           lyrata] gi|297324935|gb|EFH55355.1| hypothetical protein
           ARALYDRAFT_901664 [Arabidopsis lyrata subsp. lyrata]
          Length = 85

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/60 (61%), Positives = 48/60 (80%)
 Frame = -2

Query: 396 VFEQRRSVYKTISDNQSQLVSQSQIRESILGKKSRLKFAHLWNKAVDQTFGPVITSLSSR 217
           VFEQR+ +++++SD +SQ V QSQ+R+ I GKK R++FA LWNKAVDQTF P I  LSSR
Sbjct: 24  VFEQRKLIHESVSDPKSQFVDQSQVRDRIFGKKYRMEFASLWNKAVDQTFEPAIEYLSSR 83


>ref|XP_003538206.1| PREDICTED: uncharacterized protein LOC100306159 isoform 2 [Glycine
           max]
          Length = 103

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/79 (53%), Positives = 50/79 (63%), Gaps = 18/79 (22%)
 Frame = -2

Query: 396 VFEQRRSVYKTISDNQSQLV------------------SQSQIRESILGKKSRLKFAHLW 271
           VFEQRR +Y +ISD+QSQLV                      ++E I GKKSR +FAH+W
Sbjct: 24  VFEQRRYIYASISDSQSQLVILPHFTAWEGFKMRDGIVHHVHVKEPIFGKKSRSEFAHVW 83

Query: 270 NKAVDQTFGPVITSLSSRG 214
           NK VDQTFGP+I SLSSRG
Sbjct: 84  NKTVDQTFGPLIKSLSSRG 102


Top