BLASTX nr result

ID: Panax21_contig00032468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032468
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   155   8e-36
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   151   2e-34
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...   149   6e-34
ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cuc...   129   6e-28
ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cuc...   129   1e-27

>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score =  155 bits (393), Expect = 8e-36
 Identities = 106/274 (38%), Positives = 147/274 (53%), Gaps = 4/274 (1%)
 Frame = +2

Query: 2   KSWHDLISNTDWSVL--WKPKPISGLYMCKYAREYNRNIKFHFIPLDGDRQSKPLERSLA 175
           K W  LI++  +S     KP P+S L              F F+PLD  + S P   SL 
Sbjct: 44  KHWLSLITDPHFSRRKNLKPNPVSAL--------------FSFVPLDPLQTSAPFT-SLT 88

Query: 176 FIKAP--VQILQSCNGLFLCCSPEATALDQGKSIYYICNPVTKQFTTLPRPHGHPVEGTI 349
           F+  P  ++ILQSCNGLF C S +    +  +  YYI NP TKQFTTLP   G  V   +
Sbjct: 89  FVDHPRGIEILQSCNGLFCCSSVD---YNDSERKYYIYNPTTKQFTTLPPLCGRSVRRVL 145

Query: 350 RCINLAVDFSKSLEYKVVAVSFHSGRVPVSRNQVEVYSSKSRIWKFSRGTFEAESHEIDY 529
             +NLA D SKS  YKVV V     +      Q+++ S ++  W+ S   F A    +D+
Sbjct: 146 G-VNLAFDPSKSHTYKVVCVQ--RCKSSYDHCQIQISSLETGPWRVSGVPFAAPI-SVDF 201

Query: 530 ESGAYWKSALHWPSFSSETAPYFNVDKECLGVMPMPPFQGSNGLRSFSYFGESNGHLLLI 709
            SG YW  A+HW S   E + YF++++E +  MPMPP    +  R    FGES GHL L+
Sbjct: 202 PSGVYWNGAIHWIS-PREASLYFDLNEELVREMPMPPVPDDSNERGIRCFGESCGHLHLV 260

Query: 710 DFDCGRRVSEFSVFEMKDDYSEWFVKYRVNLYAV 811
           +       ++F+V+EM+ D+S WFVK+RV+L  V
Sbjct: 261 EI-YESSTTQFNVYEMERDHSGWFVKFRVDLNGV 293


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  151 bits (381), Expect = 2e-34
 Identities = 102/241 (42%), Positives = 134/241 (55%), Gaps = 4/241 (1%)
 Frame = +2

Query: 107 NIKFHFIPLDGDRQSKPLERSLAFIKAP--VQILQSCNGLFLCCSPEATALDQGKSI-YY 277
           N  F FI  D  + S+P  RSL FI  P  V++LQ CNGL LCCS   T    G S  YY
Sbjct: 91  NSNFDFISFDEKKASEPPLRSLDFIGDPLGVKVLQVCNGL-LCCS---TVRSLGTSRNYY 146

Query: 278 ICNPVTKQFTTLPRPHGHPVEGTIRCINLAVDFSKSLEYKVVAVSFHSGRVPVSRNQVEV 457
           ICN  T++F+ LP P       T+  INLA D SKS  Y V+ V   S  V +S  Q+E+
Sbjct: 147 ICNLATRRFSVLPPPCSSGGRDTVFGINLAFDPSKSPYYSVICV--RSCEVSISHYQIEI 204

Query: 458 YSSKSRIWKFSRGTFEAESHEIDYESGAYWKSALHWPSFSSETAPYFNVDKECLGVM-PM 634
           YSS +  W+ S   F A    + Y+ G +W  A+HW S  S  + YF +D+  +  M P 
Sbjct: 205 YSSGTGDWRLSGKPFRAPFDMVFYD-GVFWNGAVHWIS-PSGASLYFGIDEGRIDTMPPP 262

Query: 635 PPFQGSNGLRSFSYFGESNGHLLLIDFDCGRRVSEFSVFEMKDDYSEWFVKYRVNLYAVE 814
           PP  G  G R   +FGES GHL +I+   G R ++F V+EM+ DYS W V++ V+L  V 
Sbjct: 263 PPGPGGWGKRRIRHFGESGGHLHIIEI-YGPRTTQFVVYEMERDYSNWGVRFSVDLDKVI 321

Query: 815 A 817
           A
Sbjct: 322 A 322


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score =  149 bits (377), Expect = 6e-34
 Identities = 104/277 (37%), Positives = 146/277 (52%), Gaps = 5/277 (1%)
 Frame = +2

Query: 2   KSWHDLISNTDWSVLWKPKPISGLYMCKYAREYNRNIKFHFIPLDGDRQSKPLERS-LAF 178
           K W  LIS   +S L   +  +      + R  N  ++F F+ L     S     S L+F
Sbjct: 37  KQWLSLISTPHFSSLHTLRNPNHTISALFLR--NSPLEFKFLSLSSSSSSSSSSASPLSF 94

Query: 179 -IKAPVQILQSCNGLFLCCSPEATALDQGKSIYYICNPVTKQFTTLPRPHGHPVEG---T 346
            +   ++ILQSCNGL LC +         K  YYI NP TKQ  TLP   G        T
Sbjct: 95  DLFHGIKILQSCNGLLLCSTLPKIGQ---KRNYYISNPTTKQMFTLPSLVGDANAASPTT 151

Query: 347 IRCINLAVDFSKSLEYKVVAVSFHSGRVPVSRNQVEVYSSKSRIWKFSRGTFEAESHEID 526
           +  +NLA D  KS  YKV+ V   S    + + Q+E Y S+   W+ S   F A   ++ 
Sbjct: 152 LFGLNLAFDPLKSCNYKVICV--RSTTNSIYQYQIETYQSEIAAWRLSGLPFVAP-FDMV 208

Query: 527 YESGAYWKSALHWPSFSSETAPYFNVDKECLGVMPMPPFQGSNGLRSFSYFGESNGHLLL 706
           +++G +W  A+HW S ++  A YF++D+EC+  MP  PF    G R F YFGES+GHL L
Sbjct: 209 FDNGVFWNGAIHWIS-ATGNAIYFDMDRECISSMPKLPFSYEWGKRRFRYFGESDGHLHL 267

Query: 707 IDFDCGRRVSEFSVFEMKDDYSEWFVKYRVNLYAVEA 817
           I+   G R ++F+V+EM+ DYS W ++YRV L  V A
Sbjct: 268 IEI-YGLRTTQFNVYEMEKDYSFWRIRYRVQLDHVVA 303


>ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score =  129 bits (325), Expect = 6e-28
 Identities = 94/276 (34%), Positives = 141/276 (51%), Gaps = 6/276 (2%)
 Frame = +2

Query: 2   KSWHDLISNTDWS----VLWKPKPI-SGLYMCKYAREYNRNIKFHFIPLDGDRQSKPLER 166
           K W  LISN ++S    +   P P  SG++   + R   ++  F FI    +    P E 
Sbjct: 43  KRWLSLISNPNFSHRRTISHHPNPTPSGIF---FPRPTPKSPPFDFINFTTNPSRPPFES 99

Query: 167 S-LAFIKAPVQILQSCNGLFLCCSPEATALDQGKSIYYICNPVTKQFTTLPRPHGHPVEG 343
              A  K    ILQSCNGLFLC +       +    +YI NP T   T LP    +   G
Sbjct: 100 PHFADDKHGFLILQSCNGLFLCSTYNGNYSTRD---FYIHNPTTNHHTKLP----YLQVG 152

Query: 344 TIRCINLAVDFSKSLEYKVVAVSFHSGRVPVSRNQVEVYSSKSRIWKFSRGTFEAESHEI 523
            +  +NLA D  +S +YKV+ V +          Q+E+YSS +  W+  +G F A    +
Sbjct: 153 AVFGLNLAFDPLRSSDYKVICVRYSDAYTDTF--QIEMYSSVTGPWRPVQGVFSAPL-SV 209

Query: 524 DYESGAYWKSALHWPSFSSETAPYFNVDKECLGVMPMPPFQGSNGLRSFSYFGESNGHLL 703
            ++SG YW +A+HW S +SE + YF++ +E +  +PMP        R   YFG   G+L 
Sbjct: 210 RFDSGVYWNNAVHWIS-TSENSLYFDLREEKVHDLPMPGVPDGQEQRRVKYFGTCGGNLH 268

Query: 704 LIDFDCGRRVSEFSVFEMKDDYSEWFVKYRVNLYAV 811
           LI+    + + E +V++M+DD+  WFV+YRV+L  V
Sbjct: 269 LIEIYEAQEM-ELNVYQMQDDHCGWFVRYRVDLRGV 303


>ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score =  129 bits (323), Expect = 1e-27
 Identities = 94/276 (34%), Positives = 141/276 (51%), Gaps = 6/276 (2%)
 Frame = +2

Query: 2   KSWHDLISNTDWS----VLWKPKPI-SGLYMCKYAREYNRNIKFHFIPLDGDRQSKPLER 166
           K W  LISN ++S    +   P P  SG++   + R   ++  F FI    +    P E 
Sbjct: 43  KRWLSLISNPNFSHRRTISHHPNPTPSGIF---FPRPTPKSPPFDFINFTTNPSRPPFES 99

Query: 167 S-LAFIKAPVQILQSCNGLFLCCSPEATALDQGKSIYYICNPVTKQFTTLPRPHGHPVEG 343
              A  K    ILQSCNGLFLC +       +    +YI NP T   T LP    +   G
Sbjct: 100 PHFADDKHGFLILQSCNGLFLCSTYNGNYSTRD---FYIHNPTTNHHTKLP----YLQVG 152

Query: 344 TIRCINLAVDFSKSLEYKVVAVSFHSGRVPVSRNQVEVYSSKSRIWKFSRGTFEAESHEI 523
            +  +NLA D  +S +YKV+ V +          Q+E+YSS +  W+  +G F A    +
Sbjct: 153 AVFGLNLAFDPLRSSDYKVICVRYSDAYTDTF--QIEMYSSVTGPWRPVQGVFSAPL-SM 209

Query: 524 DYESGAYWKSALHWPSFSSETAPYFNVDKECLGVMPMPPFQGSNGLRSFSYFGESNGHLL 703
            ++SG YW +A+HW S +SE + YF++ +E +  +PMP        R   YFG   G+L 
Sbjct: 210 RFDSGVYWNNAVHWIS-TSENSLYFDLREEKVHDLPMPGVPDGQEQRRVKYFGTCGGNLN 268

Query: 704 LIDFDCGRRVSEFSVFEMKDDYSEWFVKYRVNLYAV 811
           LI+    + + E +V++M+DD+  WFV+YRV+L  V
Sbjct: 269 LIEIYEAQEM-ELNVYQMQDDHCGWFVRYRVDLRGV 303


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