BLASTX nr result

ID: Panax21_contig00032407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032407
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280613.1| PREDICTED: cyclin-dependent kinase D-1 [Viti...   213   2e-53
dbj|BAF75824.1| CDK activating kinase [Nicotiana tabacum]             202   3e-50
ref|XP_004137331.1| PREDICTED: cyclin-dependent kinase D-1-like ...   194   1e-47
emb|CAN60748.1| hypothetical protein VITISV_009013 [Vitis vinifera]   185   4e-45
ref|XP_002317890.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45

>ref|XP_002280613.1| PREDICTED: cyclin-dependent kinase D-1 [Vitis vinifera]
           gi|297734275|emb|CBI15522.3| unnamed protein product
           [Vitis vinifera]
          Length = 422

 Score =  213 bits (542), Expect = 2e-53
 Identities = 103/145 (71%), Positives = 122/145 (84%), Gaps = 4/145 (2%)
 Frame = -3

Query: 595 FMYDPKSRISAQQALEHRYFSSGPLPTEPASLPRP-PKKESLNSKVLDFNPHDGPIVLSP 419
           F YDPK+RIS QQALEHRYF+SGPLPTEPA LPRP PK+ESLN++V DFN  +GP VLSP
Sbjct: 277 FTYDPKTRISVQQALEHRYFTSGPLPTEPAKLPRPHPKRESLNTRVSDFNQQEGPTVLSP 336

Query: 418 PRKSRRVMLHREGFEGNAHQIDKVDDHGNEIRQGGGER---SGHAPMSLDFSIFGAKPPT 248
           PRKSRRVM  R+GFE NAHQ++K D+H N+IRQ  GER   + HAPMS+DFS+FG++PP 
Sbjct: 337 PRKSRRVMPQRDGFEENAHQVEKSDEHVNDIRQATGERMSWNEHAPMSIDFSVFGSRPPP 396

Query: 247 RPTINSADKTHLKRKLDLEFLAPEE 173
           RPTINSADK+ LKRKLDLEF  P++
Sbjct: 397 RPTINSADKSRLKRKLDLEFQQPDQ 421


>dbj|BAF75824.1| CDK activating kinase [Nicotiana tabacum]
          Length = 411

 Score =  202 bits (515), Expect = 3e-50
 Identities = 103/142 (72%), Positives = 113/142 (79%), Gaps = 1/142 (0%)
 Frame = -3

Query: 595 FMYDPKSRISAQQALEHRYFSSGPLPTEPASLPRPP-KKESLNSKVLDFNPHDGPIVLSP 419
           F YDPK+RISAQQALEHRYFSSGPLPTEP  LPRPP K+ES N +V DFN  DGP+VLSP
Sbjct: 276 FSYDPKARISAQQALEHRYFSSGPLPTEPVLLPRPPPKRESANPRVSDFNSRDGPVVLSP 335

Query: 418 PRKSRRVMLHREGFEGNAHQIDKVDDHGNEIRQGGGERSGHAPMSLDFSIFGAKPPTRPT 239
           PRKSRRVM  REGFE N    +K+DDHGN      GERS   PMSLDFS+FG +PPTRPT
Sbjct: 336 PRKSRRVMPQREGFEANMRP-EKMDDHGN-----AGERSEQVPMSLDFSVFGMRPPTRPT 389

Query: 238 INSADKTHLKRKLDLEFLAPEE 173
           INSAD++HLKRKLDLEF   EE
Sbjct: 390 INSADRSHLKRKLDLEFQPEEE 411


>ref|XP_004137331.1| PREDICTED: cyclin-dependent kinase D-1-like [Cucumis sativus]
           gi|449497514|ref|XP_004160424.1| PREDICTED:
           cyclin-dependent kinase D-1-like [Cucumis sativus]
          Length = 418

 Score =  194 bits (492), Expect = 1e-47
 Identities = 95/142 (66%), Positives = 113/142 (79%), Gaps = 6/142 (4%)
 Frame = -3

Query: 595 FMYDPKSRISAQQALEHRYFSSGPLPTEPASLPRPPKKE---SLNSKVLDFNPHDGPIVL 425
           F YDPKSRI+ QQALEHRYF+S PLPT+P+ LPRP  K    + NS+VLD N +DGP VL
Sbjct: 275 FAYDPKSRITIQQALEHRYFTSAPLPTDPSKLPRPTSKREPTNSNSRVLDLNSNDGPTVL 334

Query: 424 SPPRKSRRVMLHREGFEGNAHQIDKVDDHGNEIRQ---GGGERSGHAPMSLDFSIFGAKP 254
           SPPRKSRRVM  RE FEGNA++ D++DDH NE+R+   G   ++  APMSLDFS+FG KP
Sbjct: 335 SPPRKSRRVMPDREAFEGNAYRADRLDDHVNEVRELAAGNTSKNEAAPMSLDFSVFGGKP 394

Query: 253 PTRPTINSADKTHLKRKLDLEF 188
           P RPTINSAD++HLKRKLDLEF
Sbjct: 395 PNRPTINSADRSHLKRKLDLEF 416


>emb|CAN60748.1| hypothetical protein VITISV_009013 [Vitis vinifera]
          Length = 376

 Score =  185 bits (470), Expect = 4e-45
 Identities = 89/125 (71%), Positives = 105/125 (84%), Gaps = 4/125 (3%)
 Frame = -3

Query: 595 FMYDPKSRISAQQALEHRYFSSGPLPTEPASLPRP-PKKESLNSKVLDFNPHDGPIVLSP 419
           F YDPK+RIS QQALEHRYF+SGPLPTEPA LPRP PK+ESLN++V DFN  +GP VLSP
Sbjct: 251 FTYDPKTRISVQQALEHRYFTSGPLPTEPAKLPRPHPKRESLNTRVSDFNQQEGPTVLSP 310

Query: 418 PRKSRRVMLHREGFEGNAHQIDKVDDHGNEIRQGGGER---SGHAPMSLDFSIFGAKPPT 248
           PRKSRRVM  R+GFE NAHQ++K D+H N+IRQ  GER   + HAPMS+DFS+FG++PP 
Sbjct: 311 PRKSRRVMPQRDGFEENAHQVEKSDEHVNDIRQATGERMSWNEHAPMSIDFSVFGSRPPP 370

Query: 247 RPTIN 233
           RPTIN
Sbjct: 371 RPTIN 375


>ref|XP_002317890.1| predicted protein [Populus trichocarpa] gi|222858563|gb|EEE96110.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  184 bits (468), Expect = 8e-45
 Identities = 93/144 (64%), Positives = 112/144 (77%), Gaps = 4/144 (2%)
 Frame = -3

Query: 595 FMYDPKSRISAQQALEHRYFSSGPLPTEPASLPRP-PKKESLNSKVLDFNPHDGPIVLSP 419
           F YDPK+RI+ QQALEHRYF+S PLPT+PA LPRP PK+ES N +  D   H+GP VLSP
Sbjct: 275 FTYDPKTRITVQQALEHRYFTSVPLPTDPAKLPRPAPKRESHNPRTSDL--HEGPTVLSP 332

Query: 418 PRKSRRVMLHREGFEGNAHQIDKVDDHGNEIRQGGGE---RSGHAPMSLDFSIFGAKPPT 248
            +K+RRVM  RE F+GNA+ +DK+D HG EIR   G+   R+   PMS+DFSIFGAKP +
Sbjct: 333 KKKARRVMPDREVFDGNAYHVDKIDQHGGEIRWAAGDNTSRNEQVPMSVDFSIFGAKPMS 392

Query: 247 RPTINSADKTHLKRKLDLEFLAPE 176
           RPTINSAD++HLKRKLDLEF  PE
Sbjct: 393 RPTINSADRSHLKRKLDLEFQHPE 416


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