BLASTX nr result

ID: Panax21_contig00032348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032348
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510963.1| Structural maintenance of chromosome, putati...   152   2e-35
ref|XP_003540523.1| PREDICTED: structural maintenance of chromos...   150   1e-34
ref|XP_002304405.1| condensin complex components subunit [Populu...   149   2e-34
ref|XP_002864790.1| hypothetical protein ARALYDRAFT_496418 [Arab...   149   3e-34
ref|XP_002326795.1| condensin complex components subunit [Populu...   149   3e-34

>ref|XP_002510963.1| Structural maintenance of chromosome, putative [Ricinus communis]
            gi|223550078|gb|EEF51565.1| Structural maintenance of
            chromosome, putative [Ricinus communis]
          Length = 1176

 Score =  152 bits (385), Expect = 2e-35
 Identities = 77/86 (89%), Positives = 80/86 (93%)
 Frame = -2

Query: 259  KLVNKKVMAMFEKAEDEFNDLISKKNIIENDKSKITMVIEELDEKKRETLKVTWVKVNND 80
            K VNKKVMAMFEKAEDE+NDL+SKKNIIENDKSKI  VIEELDEKK+ETLKVTWVKVNND
Sbjct: 979  KRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLKVTWVKVNND 1038

Query: 79   FGSIFSILLPDTMAKLEPLEGGSFLD 2
            FGSIFS LLP TMAKLEP EGGSFLD
Sbjct: 1039 FGSIFSTLLPGTMAKLEPPEGGSFLD 1064


>ref|XP_003540523.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
            [Glycine max]
          Length = 1176

 Score =  150 bits (378), Expect = 1e-34
 Identities = 75/86 (87%), Positives = 80/86 (93%)
 Frame = -2

Query: 259  KLVNKKVMAMFEKAEDEFNDLISKKNIIENDKSKITMVIEELDEKKRETLKVTWVKVNND 80
            K VNKKVMAMFEKAEDE+NDL+SKKNIIENDKSKI MVIEELDEKK+ETL VTW+KVNND
Sbjct: 979  KRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKMVIEELDEKKKETLNVTWIKVNND 1038

Query: 79   FGSIFSILLPDTMAKLEPLEGGSFLD 2
            FGSIFS+LLP TMAKLEP EG SFLD
Sbjct: 1039 FGSIFSMLLPGTMAKLEPPEGCSFLD 1064


>ref|XP_002304405.1| condensin complex components subunit [Populus trichocarpa]
            gi|222841837|gb|EEE79384.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1176

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/86 (88%), Positives = 79/86 (91%)
 Frame = -2

Query: 259  KLVNKKVMAMFEKAEDEFNDLISKKNIIENDKSKITMVIEELDEKKRETLKVTWVKVNND 80
            K VNKKVMAMFEKAEDE+NDL+SKKNIIENDKSKI  VIEELDEKK+ETLKVTWVKVNND
Sbjct: 979  KRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKINKVIEELDEKKKETLKVTWVKVNND 1038

Query: 79   FGSIFSILLPDTMAKLEPLEGGSFLD 2
            FGSIFS LLP TMAKLEP EG SFLD
Sbjct: 1039 FGSIFSTLLPGTMAKLEPPEGCSFLD 1064


>ref|XP_002864790.1| hypothetical protein ARALYDRAFT_496418 [Arabidopsis lyrata subsp.
            lyrata] gi|297310625|gb|EFH41049.1| hypothetical protein
            ARALYDRAFT_496418 [Arabidopsis lyrata subsp. lyrata]
          Length = 1175

 Score =  149 bits (375), Expect = 3e-34
 Identities = 76/86 (88%), Positives = 78/86 (90%)
 Frame = -2

Query: 259  KLVNKKVMAMFEKAEDEFNDLISKKNIIENDKSKITMVIEELDEKKRETLKVTWVKVNND 80
            K VNKKVMAMFEKAEDE+N LISKKN IENDKSKIT VIEELDEKK+ETLKVTWVKVN D
Sbjct: 979  KRVNKKVMAMFEKAEDEYNALISKKNTIENDKSKITKVIEELDEKKKETLKVTWVKVNQD 1038

Query: 79   FGSIFSILLPDTMAKLEPLEGGSFLD 2
            FGSIFS LLP TMAKLEP EGGSFLD
Sbjct: 1039 FGSIFSTLLPGTMAKLEPPEGGSFLD 1064


>ref|XP_002326795.1| condensin complex components subunit [Populus trichocarpa]
            gi|222834117|gb|EEE72594.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1176

 Score =  149 bits (375), Expect = 3e-34
 Identities = 75/86 (87%), Positives = 79/86 (91%)
 Frame = -2

Query: 259  KLVNKKVMAMFEKAEDEFNDLISKKNIIENDKSKITMVIEELDEKKRETLKVTWVKVNND 80
            K VNKKVMAMFEKAEDE+NDL+SKKNIIENDKSKI  VIEELDEKK+ETLKVTWVKVNND
Sbjct: 979  KRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLKVTWVKVNND 1038

Query: 79   FGSIFSILLPDTMAKLEPLEGGSFLD 2
            FGS+FS LLP TMAKLEP EG SFLD
Sbjct: 1039 FGSVFSTLLPGTMAKLEPPEGCSFLD 1064


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