BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032345
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19224.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-21
emb|CBI40661.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|NP_568214.1| pentatricopeptide repeat-containing protein [Ar...    97   2e-18
ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18

>emb|CBI19224.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  111 bits (278), Expect = 5e-23
 Identities = 60/117 (51%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
 Frame = +1

Query: 67  FTISRSNYTSRASYISRTWRYFSSQALPNNELK-NHRNDDLRSRIIGLVLPRRSATLVLQ 243
           FT+ R  Y+SR S         SS+  P +E     + DDL SR++ LV PRRSAT VLQ
Sbjct: 8   FTLRRYAYSSRRS--------ISSKTTPMDEAACTCKRDDLTSRMLKLVFPRRSATAVLQ 59

Query: 244 NWVDEGNNVSVSELRWISKQLRKYRRYKHALEVLTWMEVQDRFLIKEADHAIILDLI 414
           NW+D+G+ V+ S+LR +S+QL K +R+KHALE+L WME Q+RF +  ADHAI L+LI
Sbjct: 60  NWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWMEAQNRFQMSAADHAIRLELI 116


>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Vitis vinifera]
          Length = 475

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/81 (60%), Positives = 65/81 (80%)
 Frame = +1

Query: 172 RNDDLRSRIIGLVLPRRSATLVLQNWVDEGNNVSVSELRWISKQLRKYRRYKHALEVLTW 351
           + DDL SR++ LV PRRSAT VLQNW+D+G+ V+ S+LR +S+QL K +R+KHALE+L W
Sbjct: 9   KRDDLTSRMLKLVFPRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAW 68

Query: 352 MEVQDRFLIKEADHAIILDLI 414
           ME Q+RF +  ADHAI L+LI
Sbjct: 69  MEAQNRFQMSAADHAIRLELI 89


>emb|CBI40661.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
 Frame = +1

Query: 64  CFTISRSNYTSRASYISR--TWRYFSSQALPNNELKNH----RNDDLRSRIIGLVLPRRS 225
           C + S + + +    IS    +R  SS+ L +  L+       NDDL+SRI  L LP+RS
Sbjct: 7   CLSNSTTLFVNYRQCISEKFAFRLLSSRTLRSEVLEESPNSPENDDLKSRIFKLRLPKRS 66

Query: 226 ATLVLQNWVDEGNNVSVSELRWISKQLRKYRRYKHALEVLTWMEVQDRFLIKEADHAIIL 405
            T VLQ W+ EGN V +SELR ISK+LR+ +RYKHALE+  WM   D F + ++D+A+ +
Sbjct: 67  VTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSHDEFELSDSDNAVRI 126

Query: 406 DLI 414
           DL+
Sbjct: 127 DLM 129


>ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75165070|sp|Q94B59.1|PP372_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g09450, mitochondrial; Flags: Precursor
           gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis
           thaliana] gi|27311913|gb|AAO00922.1| putative protein
           [Arabidopsis thaliana] gi|332004012|gb|AED91395.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 409

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 57/134 (42%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
 Frame = +1

Query: 19  MYTNPCTYQCRLALYCFTISRSNYTSRASYISRTWRYFSSQALPNNEL--KNHRNDDLRS 192
           M T    +  R  L    +  SN+   A   SR  + +++ A   N L  ++   DDL+S
Sbjct: 1   MATRSLFHSLRCRLTNNGVLGSNFIRNAES-SRFSKSYNADAAIGNSLVEESEEKDDLKS 59

Query: 193 RIIGLVLPRRSATLVLQNWVDEGNNVSVSELRWISKQLRKYRRYKHALEVLTWMEVQDRF 372
           RI  L LP+RSAT VL+ W+ EGN ++++ELR ISK+LR+ RRYKHALEV  WM   +  
Sbjct: 60  RIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQHEES 119

Query: 373 LIKEADHAIILDLI 414
            I +AD+A  +DLI
Sbjct: 120 KISDADYASRIDLI 133


>ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial [Vitis vinifera]
          Length = 396

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/101 (50%), Positives = 68/101 (67%)
 Frame = +1

Query: 112 SRTWRYFSSQALPNNELKNHRNDDLRSRIIGLVLPRRSATLVLQNWVDEGNNVSVSELRW 291
           SRT R    +  PN+      NDDL+SRI  L LP+RS T VLQ W+ EGN V +SELR 
Sbjct: 26  SRTLRSEVLEESPNSP----ENDDLKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISELRN 81

Query: 292 ISKQLRKYRRYKHALEVLTWMEVQDRFLIKEADHAIILDLI 414
           ISK+LR+ +RYKHALE+  WM   D F + ++D+A+ +DL+
Sbjct: 82  ISKELRRAQRYKHALEISEWMVSHDEFELSDSDNAVRIDLM 122