BLASTX nr result

ID: Panax21_contig00032338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032338
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA91272.1| transposon protein, putative, CACTA, En/Spm sub-c...   129   2e-28
emb|CAD40757.2| OSJNBa0081G05.10 [Oryza sativa Japonica Group]        124   6e-27
ref|XP_002268753.2| PREDICTED: uncharacterized protein LOC100261...   124   6e-27
ref|XP_003632697.1| PREDICTED: uncharacterized protein LOC100854...   124   6e-27
emb|CAN78763.1| hypothetical protein VITISV_003315 [Vitis vinifera]   124   6e-27

>gb|ABA91272.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 823

 Score =  129 bits (324), Expect = 2e-28
 Identities = 68/144 (47%), Positives = 85/144 (59%), Gaps = 7/144 (4%)
 Frame = -3

Query: 419 LHYKNEHDCSERGFNDLLAIFR-EFLPKDNTLPASYYEVKKMVKGLNLGYEKIDACEQDY 243
           LH KN    S + F  LL + R +FLP D+TLP SYYE KK ++ L L Y KIDAC+ DY
Sbjct: 94  LHVKNLGKWSNKSFTALLELLRKDFLPHDSTLPNSYYEAKKTIRELGLSYIKIDACKNDY 153

Query: 242 MLYYGEDKDKVQCDICNLPWYKITKRGGKEKH------VPKKILWYFPLAPRLQRLFMSS 81
           MLY+ ED D   C +C    +K  K  G+ KH      +P K + YFP+ PRLQRLFM  
Sbjct: 154 MLYWKEDIDAESCKVCGSSRWKEEKHTGEIKHSSAGKKIPHKTMRYFPIKPRLQRLFMCR 213

Query: 80  HTAPSMRWHRTRDVVPGQLTHPAD 9
            TA   +WH+   V  G + HPAD
Sbjct: 214 KTAAYAKWHKECRVDDGVMRHPAD 237


>emb|CAD40757.2| OSJNBa0081G05.10 [Oryza sativa Japonica Group]
          Length = 1490

 Score =  124 bits (312), Expect = 6e-27
 Identities = 67/144 (46%), Positives = 83/144 (57%), Gaps = 7/144 (4%)
 Frame = -3

Query: 419 LHYKNEHDCSERGFNDLLAIFR-EFLPKDNTLPASYYEVKKMVKGLNLGYEKIDACEQDY 243
           LH KN    S + F  LL + R +FLP D+TLP SYYE KK ++ L L Y KIDAC+ D 
Sbjct: 172 LHVKNLGKWSNKSFTALLELLRKDFLPHDSTLPNSYYEAKKTIRELGLSYIKIDACKNDC 231

Query: 242 MLYYGEDKDKVQCDICNLPWYKITKRGGKEKH------VPKKILWYFPLAPRLQRLFMSS 81
           MLY+ ED D   C +C    +K  K  G+ KH      +P K + YFP  PRLQRLFM  
Sbjct: 232 MLYWKEDIDAESCKVCGSSRWKEEKHTGEIKHSSAGKKIPHKTMRYFPTKPRLQRLFMCR 291

Query: 80  HTAPSMRWHRTRDVVPGQLTHPAD 9
            TA   +WH+   V  G + HPAD
Sbjct: 292 KTAAYAKWHKECRVDDGVMRHPAD 315


>ref|XP_002268753.2| PREDICTED: uncharacterized protein LOC100261419 [Vitis vinifera]
          Length = 1410

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/139 (46%), Positives = 86/139 (61%)
 Frame = -3

Query: 419 LHYKNEHDCSERGFNDLLAIFREFLPKDNTLPASYYEVKKMVKGLNLGYEKIDACEQDYM 240
           +H K  +  S + F+ LL +  E  P+   LP+  Y+ KKM++ L LGYEKI AC+ D  
Sbjct: 153 MHLKVLNHWSNKSFDMLLELLSEIFPEGTNLPSCTYDAKKMLRDLGLGYEKIHACKFDCA 212

Query: 239 LYYGEDKDKVQCDICNLPWYKITKRGGKEKHVPKKILWYFPLAPRLQRLFMSSHTAPSMR 60
           L++ E++   +C IC+   YKI    GK K +P K L +FPL PRLQRLFMS HTA  MR
Sbjct: 213 LFWKENEFLDKCPICDEDRYKIND--GKGKKIPHKSLRFFPLKPRLQRLFMSRHTASDMR 270

Query: 59  WHRTRDVVPGQLTHPADGD 3
           WH+ + V  G L HPAD +
Sbjct: 271 WHKEKRVDDGVLRHPADAE 289


>ref|XP_003632697.1| PREDICTED: uncharacterized protein LOC100854636 [Vitis vinifera]
          Length = 1040

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/139 (46%), Positives = 86/139 (61%)
 Frame = -3

Query: 419 LHYKNEHDCSERGFNDLLAIFREFLPKDNTLPASYYEVKKMVKGLNLGYEKIDACEQDYM 240
           +H K  +  S + F+ LL +  E  P+   LP+  Y+ KKM++ L LGYEKI AC+ D  
Sbjct: 80  MHLKVLNHWSNKSFDMLLELLSEIFPEGTNLPSCTYDAKKMLRDLGLGYEKIHACKFDCA 139

Query: 239 LYYGEDKDKVQCDICNLPWYKITKRGGKEKHVPKKILWYFPLAPRLQRLFMSSHTAPSMR 60
           L++ E++   +C IC+   YKI    GK K +P K L +FPL PRLQRLFMS HTA  MR
Sbjct: 140 LFWKENEFLDKCPICDEDRYKIND--GKGKKIPHKSLRFFPLKPRLQRLFMSRHTASDMR 197

Query: 59  WHRTRDVVPGQLTHPADGD 3
           WH+ + V  G L HPAD +
Sbjct: 198 WHKEKRVDDGVLRHPADAE 216


>emb|CAN78763.1| hypothetical protein VITISV_003315 [Vitis vinifera]
          Length = 1226

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/139 (46%), Positives = 86/139 (61%)
 Frame = -3

Query: 419 LHYKNEHDCSERGFNDLLAIFREFLPKDNTLPASYYEVKKMVKGLNLGYEKIDACEQDYM 240
           +H K  +  S + F+ LL +  E  P+   LP+  Y+ KKM++ L LGYEKI AC+ D  
Sbjct: 180 MHLKVLNHWSNKSFDMLLELLSEIFPEGTNLPSCTYDAKKMLRDLGLGYEKIHACKFDCA 239

Query: 239 LYYGEDKDKVQCDICNLPWYKITKRGGKEKHVPKKILWYFPLAPRLQRLFMSSHTAPSMR 60
           L++ E++   +C IC+   YKI    GK K +P K L +FPL PRLQRLFMS HTA  MR
Sbjct: 240 LFWKENEFLDKCPICDEDRYKIND--GKGKKIPHKSLRFFPLKPRLQRLFMSRHTASDMR 297

Query: 59  WHRTRDVVPGQLTHPADGD 3
           WH+ + V  G L HPAD +
Sbjct: 298 WHKEKRVDDGVLRHPADAE 316


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