BLASTX nr result

ID: Panax21_contig00032310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032310
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine l...   366   5e-99
emb|CBI22661.3| unnamed protein product [Vitis vinifera]              366   5e-99
dbj|BAE45866.1| UDP-N-acetylmuramate-alanine ligase [Physcomitre...   250   4e-64
ref|XP_002967103.1| hypothetical protein SELMODRAFT_408505 [Sela...   241   2e-61
ref|XP_001776739.1| predicted protein [Physcomitrella patens sub...   212   9e-53

>ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine ligase-like [Vitis
           vinifera]
          Length = 541

 Score =  366 bits (939), Expect = 5e-99
 Identities = 184/262 (70%), Positives = 212/262 (80%)
 Frame = -2

Query: 922 IGHSAGNVQKHNGVSFPDAVVMSSAIPPDNVEILHAKSVGVPVYKRDYWVRKLTENYNLI 743
           +GHS  N+Q++NG S PDA+V+SSAIP DN+EILHAKSVG+PVYKR  W+ KLTE+YNLI
Sbjct: 74  LGHSESNIQRNNGSSLPDAIVVSSAIPQDNLEILHAKSVGIPVYKRGNWLGKLTEHYNLI 133

Query: 742 AVSGSHGKSTTASMLAYVLSSMGEDLTAVVGAHVPQFVGGNIIFGRGQNFVLEADEYDGC 563
           AVSG+HGKSTTASMLAYVL SMG+DLTAVVGA VPQF GGNI+ G G+NFVLEADEYD C
Sbjct: 134 AVSGTHGKSTTASMLAYVLKSMGDDLTAVVGAQVPQFGGGNIMSGSGRNFVLEADEYDCC 193

Query: 562 FLRLSPNIVVVTNVDWEHVDIYQDEEAVKTIFRTFLKQIRAGGHLILCGDSMGAYSLLEL 383
           FL L P I VVTNVDWEHVDI+ DEEAVK IFR FLKQIR GGHLILCGDS GA SLL+ 
Sbjct: 194 FLGLLPYIAVVTNVDWEHVDIFPDEEAVKAIFRRFLKQIRVGGHLILCGDSAGACSLLDD 253

Query: 382 NNQDYVSNISYSFNARPSSELGSTSYKITTYGFSRFNEWQASSVCTNSHGGSDYKLCHRG 203
             +  V++ S    +  +S+  S  Y+ITT+G SR NEW A S+  NS GGSD+ LCHRG
Sbjct: 254 TEESTVADHSSGKLSTLNSDKCSDGYRITTFGISRTNEWHALSIRPNSQGGSDFVLCHRG 313

Query: 202 RKVANISLQIPGMHNVLNSLAV 137
             VANI+LQIPG+HNVLNSLAV
Sbjct: 314 YPVANITLQIPGVHNVLNSLAV 335


>emb|CBI22661.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  366 bits (939), Expect = 5e-99
 Identities = 184/262 (70%), Positives = 212/262 (80%)
 Frame = -2

Query: 922 IGHSAGNVQKHNGVSFPDAVVMSSAIPPDNVEILHAKSVGVPVYKRDYWVRKLTENYNLI 743
           +GHS  N+Q++NG S PDA+V+SSAIP DN+EILHAKSVG+PVYKR  W+ KLTE+YNLI
Sbjct: 101 LGHSESNIQRNNGSSLPDAIVVSSAIPQDNLEILHAKSVGIPVYKRGNWLGKLTEHYNLI 160

Query: 742 AVSGSHGKSTTASMLAYVLSSMGEDLTAVVGAHVPQFVGGNIIFGRGQNFVLEADEYDGC 563
           AVSG+HGKSTTASMLAYVL SMG+DLTAVVGA VPQF GGNI+ G G+NFVLEADEYD C
Sbjct: 161 AVSGTHGKSTTASMLAYVLKSMGDDLTAVVGAQVPQFGGGNIMSGSGRNFVLEADEYDCC 220

Query: 562 FLRLSPNIVVVTNVDWEHVDIYQDEEAVKTIFRTFLKQIRAGGHLILCGDSMGAYSLLEL 383
           FL L P I VVTNVDWEHVDI+ DEEAVK IFR FLKQIR GGHLILCGDS GA SLL+ 
Sbjct: 221 FLGLLPYIAVVTNVDWEHVDIFPDEEAVKAIFRRFLKQIRVGGHLILCGDSAGACSLLDD 280

Query: 382 NNQDYVSNISYSFNARPSSELGSTSYKITTYGFSRFNEWQASSVCTNSHGGSDYKLCHRG 203
             +  V++ S    +  +S+  S  Y+ITT+G SR NEW A S+  NS GGSD+ LCHRG
Sbjct: 281 TEESTVADHSSGKLSTLNSDKCSDGYRITTFGISRTNEWHALSIRPNSQGGSDFVLCHRG 340

Query: 202 RKVANISLQIPGMHNVLNSLAV 137
             VANI+LQIPG+HNVLNSLAV
Sbjct: 341 YPVANITLQIPGVHNVLNSLAV 362


>dbj|BAE45866.1| UDP-N-acetylmuramate-alanine ligase [Physcomitrella patens]
          Length = 615

 Score =  250 bits (638), Expect = 4e-64
 Identities = 125/264 (47%), Positives = 182/264 (68%), Gaps = 1/264 (0%)
 Frame = -2

Query: 925 FIGHSAGNVQKHNGVSFPDAVVMSSAIPPDNVEILHAKSVGVPVYKRDYWVRKLTENYNL 746
           ++GHS   +    G   PDAVV+SSA+ P N E+  A+++ VP+YKR  W+ K+TE Y L
Sbjct: 165 YVGHSVAQLVPQ-GSQPPDAVVVSSAVGPGNEEVEAARALNVPIYKRGDWLGKITEGYQL 223

Query: 745 IAVSGSHGKSTTASMLAYVLSSMGEDLTAVVGAHVPQFV-GGNIIFGRGQNFVLEADEYD 569
           IAV+G+HGK+TT +ML+ VL ++GED+TA+VGA VPQF  GG+ + G  + FVLEADEYD
Sbjct: 224 IAVAGTHGKTTTTAMLSVVLRNLGEDITAIVGAQVPQFPDGGSALCGTTRKFVLEADEYD 283

Query: 568 GCFLRLSPNIVVVTNVDWEHVDIYQDEEAVKTIFRTFLKQIRAGGHLILCGDSMGAYSLL 389
           GCFL +SP++ V+TNV+WEHVD++ DEEAVK +F+ F+ QI+ GG L+ CGDS GA S+L
Sbjct: 284 GCFLGVSPHLAVLTNVEWEHVDMFPDEEAVKNMFKKFVLQIKPGGCLVACGDSAGAKSVL 343

Query: 388 ELNNQDYVSNISYSFNARPSSELGSTSYKITTYGFSRFNEWQASSVCTNSHGGSDYKLCH 209
            L  ++   ++   F             ++ T+G    ++W+A  +  N  GG+DY + +
Sbjct: 344 GLIEEEQEKDLGSPF---------PRERRVVTFGLGA-SDWRAIMLVPNPQGGTDYTVVY 393

Query: 208 RGRKVANISLQIPGMHNVLNSLAV 137
           + R +  +SL++PGM+NVLNSLAV
Sbjct: 394 KNRPMTRVSLRLPGMYNVLNSLAV 417


>ref|XP_002967103.1| hypothetical protein SELMODRAFT_408505 [Selaginella moellendorffii]
           gi|300165094|gb|EFJ31702.1| hypothetical protein
           SELMODRAFT_408505 [Selaginella moellendorffii]
          Length = 521

 Score =  241 bits (614), Expect = 2e-61
 Identities = 120/247 (48%), Positives = 170/247 (68%)
 Frame = -2

Query: 877 FPDAVVMSSAIPPDNVEILHAKSVGVPVYKRDYWVRKLTENYNLIAVSGSHGKSTTASML 698
           FPDAVV+SSAIP +N E++ A+  G+ V KR  W+ ++TE+Y LIAV+G+HGKSTT +ML
Sbjct: 96  FPDAVVVSSAIPAENEEVVAARRQGLRVIKRKEWLGEITEDYELIAVAGTHGKSTTTAML 155

Query: 697 AYVLSSMGEDLTAVVGAHVPQFVGGNIIFGRGQNFVLEADEYDGCFLRLSPNIVVVTNVD 518
             VL S  +D+TA+VGA VPQ  GGN+ +G+G  FVLEADEYDGCFL +SP++ +VT+V+
Sbjct: 156 TVVLQSFSDDITAIVGADVPQLAGGNMAYGKGGRFVLEADEYDGCFLGVSPSLAIVTSVE 215

Query: 517 WEHVDIYQDEEAVKTIFRTFLKQIRAGGHLILCGDSMGAYSLLELNNQDYVSNISYSFNA 338
           WEHVD++ DE +V+ +F+ F+ +I+  G LI+CGDS G  SL+    Q         ++ 
Sbjct: 216 WEHVDMFPDEASVREMFKHFISRIKPDGCLIICGDSAGTRSLITSLEQ---------YSK 266

Query: 337 RPSSELGSTSYKITTYGFSRFNEWQASSVCTNSHGGSDYKLCHRGRKVANISLQIPGMHN 158
           + S +L        TYG    N+W+A  +  N  GG+DY   +R R +A +SL++PG +N
Sbjct: 267 QASRKL--------TYGLHEQNDWRAIMLVPNILGGTDYVAVYRNRPMARVSLKLPGTYN 318

Query: 157 VLNSLAV 137
           VLNSLAV
Sbjct: 319 VLNSLAV 325


>ref|XP_001776739.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162671888|gb|EDQ58433.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 680

 Score =  212 bits (540), Expect = 9e-53
 Identities = 125/329 (37%), Positives = 182/329 (55%), Gaps = 66/329 (20%)
 Frame = -2

Query: 925  FIGHSAGNVQKHNGVSFPDAVVMSSAIPPDNVEILHAKSVGVPV---------------- 794
            ++GHS   +    G   PDAVV+SSA+ P N E+  A+++ VP+                
Sbjct: 165  YVGHSVAQLVPQ-GSQPPDAVVVSSAVGPGNEEVEAARALNVPIILERPHANDSESGWHF 223

Query: 793  --------YKRDYWVRKLTENYNLIAVSGSHGKSTTASMLAYVLSSMGEDLTAVVGAHVP 638
                    YKR  W+ K+TE Y LIAV+G+HGK+TT +ML+ VL ++GED+TA+VGA VP
Sbjct: 224  PYAGRSCSYKRGDWLGKITEGYQLIAVAGTHGKTTTTAMLSVVLRNLGEDITAIVGAQVP 283

Query: 637  QFV-GGNIIFGRGQNFVL--------------EADEYDGCFLRLSPNIVVVTNVDWEHVD 503
            QF  GG+ + G  + FVL              EADEYDGCFL +SP++ V+TNV+WEHVD
Sbjct: 284  QFPDGGSALCGTTRKFVLESQVRPVLWFHKFSEADEYDGCFLGVSPHLAVLTNVEWEHVD 343

Query: 502  IYQDE---------------------------EAVKTIFRTFLKQIRAGGHLILCGDSMG 404
            ++ DE                           EAVK +F+ F+ QI+ GG L+ CGDS G
Sbjct: 344  MFPDERGCLLNVTPSIDLFDQPLIVSMENILQEAVKNMFKKFVLQIKPGGCLVACGDSAG 403

Query: 403  AYSLLELNNQDYVSNISYSFNARPSSELGSTSYKITTYGFSRFNEWQASSVCTNSHGGSD 224
            A S+L L  ++   ++   F             ++ T+G    ++W+A  +  N  GG+D
Sbjct: 404  AKSVLGLIEEEQEKDLGSPF---------PRERRVVTFGLGA-SDWRAIMLVPNPQGGTD 453

Query: 223  YKLCHRGRKVANISLQIPGMHNVLNSLAV 137
            Y + ++ R +  +SL++PGM+NVLNSLAV
Sbjct: 454  YTVVYKNRPMTRVSLRLPGMYNVLNSLAV 482


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