BLASTX nr result

ID: Panax21_contig00032297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032297
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888738.1| CBS domain-containing protein [Arabidopsis l...   104   3e-42
ref|NP_001077801.1| Cystathionine beta-synthase (CBS) protein [A...   107   5e-42
ref|NP_564975.2| Cystathionine beta-synthase (CBS) protein [Arab...   107   5e-42
gb|AAK96756.1| Unknown protein [Arabidopsis thaliana]                 107   5e-42
gb|EAZ12494.1| hypothetical protein OsJ_02391 [Oryza sativa Japo...   101   6e-42

>ref|XP_002888738.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334579|gb|EFH64997.1| CBS domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 447

 Score =  104 bits (260), Expect(2) = 3e-42
 Identities = 49/65 (75%), Positives = 57/65 (87%)
 Frame = -1

Query: 455 LLLLSKYRLRNVPVIERGNPSLKNFITQSAVIHGLEKCQGRDWFDSISAHPISELGLPFM 276
           +LLLSKYRLRNVPVI+ G P +KN+ITQSAV+HGLE C+GRDWFD ISA  IS+LGLPFM
Sbjct: 233 MLLLSKYRLRNVPVIKSGEPDIKNYITQSAVVHGLEGCKGRDWFDHISALSISDLGLPFM 292

Query: 275 SSDEV 261
           S +EV
Sbjct: 293 SPNEV 297



 Score = 92.4 bits (228), Expect(2) = 3e-42
 Identities = 41/60 (68%), Positives = 56/60 (93%)
 Frame = -3

Query: 180 DQVMSIQNNDLVLEAFKRMKDNRIGGLPVVEGPHKKIVGSLSMRDIRFLLLNHDLFSNFR 1
           ++V+SI++ +L+LEAFKRM+DN IGGLPV+EGP+KKIVG++SMRDIR+LLL  ++FSNFR
Sbjct: 295 NEVISIESEELILEAFKRMRDNNIGGLPVIEGPNKKIVGNISMRDIRYLLLQPEVFSNFR 354


>ref|NP_001077801.1| Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana]
           gi|332196856|gb|AEE34977.1| Cystathionine beta-synthase
           (CBS) protein [Arabidopsis thaliana]
          Length = 476

 Score =  107 bits (267), Expect(2) = 5e-42
 Identities = 49/65 (75%), Positives = 58/65 (89%)
 Frame = -1

Query: 455 LLLLSKYRLRNVPVIERGNPSLKNFITQSAVIHGLEKCQGRDWFDSISAHPISELGLPFM 276
           +LLLSKYRLRNVPVI+ G P +KN++TQSAV+HGLE C+GRDWFD ISA PIS+LGLPFM
Sbjct: 262 MLLLSKYRLRNVPVIKTGEPDIKNYVTQSAVVHGLEGCKGRDWFDHISALPISDLGLPFM 321

Query: 275 SSDEV 261
           S +EV
Sbjct: 322 SPNEV 326



 Score = 89.0 bits (219), Expect(2) = 5e-42
 Identities = 41/60 (68%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 DQVMSIQNNDLVLEAFKRMKDNRIGGLPVVEGPHKKIVGSLSMRDIRFLLLNHDLFSNFR 1
           ++V+SI++ +L+LEAFKRM+DN IGGLPVVEG +KKIVG++SMRDIR+LLL  ++FSNFR
Sbjct: 324 NEVISIESEELILEAFKRMRDNNIGGLPVVEGLNKKIVGNISMRDIRYLLLQPEVFSNFR 383


>ref|NP_564975.2| Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana]
           gi|75262290|sp|Q9CAR3.1|KINGL_ARATH RecName:
           Full=SNF1-related protein kinase regulatory subunit
           gamma-1-like; AltName: Full=AKIN subunit gamma-1-like;
           AltName: Full=CBS domain-containing protein CBSCBS2
           gi|12325233|gb|AAG52563.1|AC010675_11 hypothetical
           protein; 77242-78931 [Arabidopsis thaliana]
           gi|190684768|gb|ACE82595.1| At1g69800 [Arabidopsis
           thaliana] gi|222424344|dbj|BAH20128.1| AT1G69800
           [Arabidopsis thaliana] gi|332196855|gb|AEE34976.1|
           Cystathionine beta-synthase (CBS) protein [Arabidopsis
           thaliana]
          Length = 447

 Score =  107 bits (267), Expect(2) = 5e-42
 Identities = 49/65 (75%), Positives = 58/65 (89%)
 Frame = -1

Query: 455 LLLLSKYRLRNVPVIERGNPSLKNFITQSAVIHGLEKCQGRDWFDSISAHPISELGLPFM 276
           +LLLSKYRLRNVPVI+ G P +KN++TQSAV+HGLE C+GRDWFD ISA PIS+LGLPFM
Sbjct: 233 MLLLSKYRLRNVPVIKTGEPDIKNYVTQSAVVHGLEGCKGRDWFDHISALPISDLGLPFM 292

Query: 275 SSDEV 261
           S +EV
Sbjct: 293 SPNEV 297



 Score = 89.0 bits (219), Expect(2) = 5e-42
 Identities = 41/60 (68%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 DQVMSIQNNDLVLEAFKRMKDNRIGGLPVVEGPHKKIVGSLSMRDIRFLLLNHDLFSNFR 1
           ++V+SI++ +L+LEAFKRM+DN IGGLPVVEG +KKIVG++SMRDIR+LLL  ++FSNFR
Sbjct: 295 NEVISIESEELILEAFKRMRDNNIGGLPVVEGLNKKIVGNISMRDIRYLLLQPEVFSNFR 354


>gb|AAK96756.1| Unknown protein [Arabidopsis thaliana]
          Length = 248

 Score =  107 bits (267), Expect(2) = 5e-42
 Identities = 49/65 (75%), Positives = 58/65 (89%)
 Frame = -1

Query: 455 LLLLSKYRLRNVPVIERGNPSLKNFITQSAVIHGLEKCQGRDWFDSISAHPISELGLPFM 276
           +LLLSKYRLRNVPVI+ G P +KN++TQSAV+HGLE C+GRDWFD ISA PIS+LGLPFM
Sbjct: 34  MLLLSKYRLRNVPVIKTGEPDIKNYVTQSAVVHGLEGCKGRDWFDHISALPISDLGLPFM 93

Query: 275 SSDEV 261
           S +EV
Sbjct: 94  SPNEV 98



 Score = 89.0 bits (219), Expect(2) = 5e-42
 Identities = 41/60 (68%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 DQVMSIQNNDLVLEAFKRMKDNRIGGLPVVEGPHKKIVGSLSMRDIRFLLLNHDLFSNFR 1
           ++V+SI++ +L+LEAFKRM+DN IGGLPVVEG +KKIVG++SMRDIR+LLL  ++FSNFR
Sbjct: 96  NEVISIESEELILEAFKRMRDNNIGGLPVVEGLNKKIVGNISMRDIRYLLLQPEVFSNFR 155


>gb|EAZ12494.1| hypothetical protein OsJ_02391 [Oryza sativa Japonica Group]
          Length = 459

 Score =  101 bits (252), Expect(2) = 6e-42
 Identities = 48/65 (73%), Positives = 56/65 (86%)
 Frame = -1

Query: 455 LLLLSKYRLRNVPVIERGNPSLKNFITQSAVIHGLEKCQGRDWFDSISAHPISELGLPFM 276
           LLLLSKYRLRNVPVIE   P +KNFITQ+ V+ GL++C+GRDWFD ISA P+S+LGLPFM
Sbjct: 236 LLLLSKYRLRNVPVIEPDKPIIKNFITQTGVVKGLQQCKGRDWFDYISALPLSDLGLPFM 295

Query: 275 SSDEV 261
           S DEV
Sbjct: 296 SLDEV 300



 Score = 94.4 bits (233), Expect(2) = 6e-42
 Identities = 43/61 (70%), Positives = 56/61 (91%)
 Frame = -3

Query: 183 VDQVMSIQNNDLVLEAFKRMKDNRIGGLPVVEGPHKKIVGSLSMRDIRFLLLNHDLFSNF 4
           +D+V+++ + DL+LEAFK MKDN+IGG+PVVEGP+KK+VGS+S+RDIRFLLL  DLFSNF
Sbjct: 297 LDEVITVNSGDLILEAFKCMKDNKIGGVPVVEGPNKKLVGSVSIRDIRFLLLRPDLFSNF 356

Query: 3   R 1
           R
Sbjct: 357 R 357


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