BLASTX nr result

ID: Panax21_contig00032276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032276
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67079.1| hypothetical protein VITISV_004500 [Vitis vinifera]   343   2e-92
ref|XP_002516406.1| hypothetical protein RCOM_1424400 [Ricinus c...   337   2e-90
ref|XP_002332131.1| predicted protein [Populus trichocarpa] gi|2...   330   2e-88
ref|XP_002321798.1| predicted protein [Populus trichocarpa] gi|2...   322   6e-86
ref|XP_004145484.1| PREDICTED: putative E3 ubiquitin-protein lig...   282   5e-74

>emb|CAN67079.1| hypothetical protein VITISV_004500 [Vitis vinifera]
          Length = 1049

 Score =  343 bits (881), Expect = 2e-92
 Identities = 175/262 (66%), Positives = 209/262 (79%), Gaps = 3/262 (1%)
 Frame = -2

Query: 778 ESIALPIYICHDLKSIDFSKSKAEKAFSRKGSSIFXXXXXXXXXXXSVTTSM--AEGARR 605
           +SIALPIYICHD ++    K KA+KA +R    +            + + S+  +EGARR
Sbjct: 42  DSIALPIYICHDRRNFHSVKHKADKAITRNAPGLLSSKRVSSDSERANSQSLGGSEGARR 101

Query: 604 RTEEPALDEVAVRAVISILSGYVGQYLRDEEFRGIIRERCYSCFVRKKKDSDNGIFANIE 425
             + PA+DEVA+RAVISILSGY+G+YL+DE FR  +RE+CY+C   +KKDSDNG+FAN+E
Sbjct: 102 --DGPAIDEVAIRAVISILSGYIGRYLKDETFRESVREKCYACLESRKKDSDNGVFANME 159

Query: 424 LGIESIEKLV-ESPGTKQELRMKLLRNSISLLTVVASLNSKSSRNGSTSGTPNSHLSACA 248
           LGIESIE+LV  SPGT  ELRMK LRNSI LL++VASLNS++SRNGST G PNSHLSACA
Sbjct: 160 LGIESIEQLVLGSPGTHMELRMKSLRNSIRLLSIVASLNSETSRNGSTCGIPNSHLSACA 219

Query: 247 QLYLSIVYKLEKNDRISARHLLQVFCDSPFLARTHLLPDLWEHFFLPHLLHLKVWYGKEL 68
           QLYLSIVYKLEKNDRISARHLLQVFCD+PFLART LLPDLWEHFFLPHLLHLKVWY  EL
Sbjct: 220 QLYLSIVYKLEKNDRISARHLLQVFCDAPFLARTDLLPDLWEHFFLPHLLHLKVWYANEL 279

Query: 67  DLISNSDYRDKEKKMKDLSKVY 2
           + +SN ++ DKEK+   LSK+Y
Sbjct: 280 EFLSNPNFGDKEKRAIALSKIY 301


>ref|XP_002516406.1| hypothetical protein RCOM_1424400 [Ricinus communis]
           gi|223544441|gb|EEF45961.1| hypothetical protein
           RCOM_1424400 [Ricinus communis]
          Length = 925

 Score =  337 bits (863), Expect = 2e-90
 Identities = 167/259 (64%), Positives = 201/259 (77%)
 Frame = -2

Query: 778 ESIALPIYICHDLKSIDFSKSKAEKAFSRKGSSIFXXXXXXXXXXXSVTTSMAEGARRRT 599
           ESI LPIYICHD K++D  K K ++A  RKGSS+F                 ++      
Sbjct: 31  ESIKLPIYICHDQKNLDSFKHKTDRASYRKGSSVFSSKQASPDL-----VRKSKPLSSTE 85

Query: 598 EEPALDEVAVRAVISILSGYVGQYLRDEEFRGIIRERCYSCFVRKKKDSDNGIFANIELG 419
           +EPA+DEVAVR VISILSGY+G+Y++D  F+ +IR +C SC VRK+KD D+ IFA +ELG
Sbjct: 86  DEPAIDEVAVRTVISILSGYIGRYIKDSSFQKMIRNKCNSCLVRKRKDLDDAIFAKMELG 145

Query: 418 IESIEKLVESPGTKQELRMKLLRNSISLLTVVASLNSKSSRNGSTSGTPNSHLSACAQLY 239
           +ESIEKLV+  GT++ELR+K LR SI L+++VASLNSK SRNGST G PNSH+SACAQLY
Sbjct: 146 MESIEKLVQEQGTRKELRIKSLRISIQLMSIVASLNSKKSRNGSTCGIPNSHISACAQLY 205

Query: 238 LSIVYKLEKNDRISARHLLQVFCDSPFLARTHLLPDLWEHFFLPHLLHLKVWYGKELDLI 59
           LSI YKLE+N+RISARHLLQVF DSPFLARTHLLPDLWEH FLPHLLHLK+WY KEL+ +
Sbjct: 206 LSIAYKLERNERISARHLLQVFSDSPFLARTHLLPDLWEHLFLPHLLHLKIWYNKELETL 265

Query: 58  SNSDYRDKEKKMKDLSKVY 2
           SNS Y DKEK+MK LSK Y
Sbjct: 266 SNSQYLDKEKRMKALSKAY 284


>ref|XP_002332131.1| predicted protein [Populus trichocarpa] gi|222875181|gb|EEF12312.1|
           predicted protein [Populus trichocarpa]
          Length = 980

 Score =  330 bits (847), Expect = 2e-88
 Identities = 163/259 (62%), Positives = 200/259 (77%)
 Frame = -2

Query: 778 ESIALPIYICHDLKSIDFSKSKAEKAFSRKGSSIFXXXXXXXXXXXSVTTSMAEGARRRT 599
           ES+ LPI+ICHD K     K K +   +RKGSSI              T  +   +  + 
Sbjct: 30  ESVILPIHICHDQKRFQSPKQKTDMGSTRKGSSISSRRVSSD------TERLQSKSLLKG 83

Query: 598 EEPALDEVAVRAVISILSGYVGQYLRDEEFRGIIRERCYSCFVRKKKDSDNGIFANIELG 419
           EEPA+D +A+RAV+SILSGY+G+Y++D  FR +IRE+C SC VR+ K SD+GIF N+E+G
Sbjct: 84  EEPAIDVIAIRAVVSILSGYIGRYIKDVSFREVIREKCNSCLVRRSKGSDDGIFVNMEVG 143

Query: 418 IESIEKLVESPGTKQELRMKLLRNSISLLTVVASLNSKSSRNGSTSGTPNSHLSACAQLY 239
           +ESIEKLVE  GT++E++M+ L+NSI LL +VASLNSK SR GST G PNSHLSACAQLY
Sbjct: 144 MESIEKLVEEKGTRKEVKMESLKNSIQLLNIVASLNSKKSRKGSTCGVPNSHLSACAQLY 203

Query: 238 LSIVYKLEKNDRISARHLLQVFCDSPFLARTHLLPDLWEHFFLPHLLHLKVWYGKELDLI 59
           LSIVYKLEKNDRISARHLL VFCDSPFLARTHLLPDLWEHF LPHLLHLKVWY +EL+ +
Sbjct: 204 LSIVYKLEKNDRISARHLLYVFCDSPFLARTHLLPDLWEHFLLPHLLHLKVWYHEELEAL 263

Query: 58  SNSDYRDKEKKMKDLSKVY 2
           S+S + +KE++MK LSKVY
Sbjct: 264 SDSQHVEKERRMKALSKVY 282


>ref|XP_002321798.1| predicted protein [Populus trichocarpa] gi|222868794|gb|EEF05925.1|
           predicted protein [Populus trichocarpa]
          Length = 961

 Score =  322 bits (825), Expect = 6e-86
 Identities = 159/259 (61%), Positives = 196/259 (75%)
 Frame = -2

Query: 778 ESIALPIYICHDLKSIDFSKSKAEKAFSRKGSSIFXXXXXXXXXXXSVTTSMAEGARRRT 599
           ES+ LPI++CHD K    SK K +KA +RKGSSIF             + S+  G     
Sbjct: 36  ESVILPIHVCHDQKRPHSSKKKTDKASTRKGSSIFSSRRVSSDTERLQSKSLLRG----- 90

Query: 598 EEPALDEVAVRAVISILSGYVGQYLRDEEFRGIIRERCYSCFVRKKKDSDNGIFANIELG 419
           E+PA+DE+A+RAV+SILSGY+G+Y +D  FR +IRE+C SC V +   SD+GIF N+E G
Sbjct: 91  EDPAIDEIAIRAVVSILSGYIGRYTKDVSFREMIREKCNSCLVGRSMGSDDGIFGNMESG 150

Query: 418 IESIEKLVESPGTKQELRMKLLRNSISLLTVVASLNSKSSRNGSTSGTPNSHLSACAQLY 239
           +ESIEKLVE   T++E++++ L+N I LL +VASLNSK S NGST G PNSHLSACAQLY
Sbjct: 151 MESIEKLVEEQATRKEVKVESLKNPIQLLNIVASLNSKKSGNGSTCGVPNSHLSACAQLY 210

Query: 238 LSIVYKLEKNDRISARHLLQVFCDSPFLARTHLLPDLWEHFFLPHLLHLKVWYGKELDLI 59
           LSIVYKLEKNDR SARHLL VFCD+PFLARTHLLPDLWEHF LPHLLHLKVWY +EL+ +
Sbjct: 211 LSIVYKLEKNDRTSARHLLHVFCDAPFLARTHLLPDLWEHFLLPHLLHLKVWYHEELEFL 270

Query: 58  SNSDYRDKEKKMKDLSKVY 2
           S S + + E+K+K LSKVY
Sbjct: 271 SGSQHVEMERKVKTLSKVY 289


>ref|XP_004145484.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Cucumis
           sativus] gi|449527759|ref|XP_004170877.1| PREDICTED:
           putative E3 ubiquitin-protein ligase LIN-like [Cucumis
           sativus]
          Length = 863

 Score =  282 bits (722), Expect = 5e-74
 Identities = 142/260 (54%), Positives = 189/260 (72%), Gaps = 1/260 (0%)
 Frame = -2

Query: 778 ESIALPIYICHDLKSIDFSKSKAEKAFSRKGSSIFXXXXXXXXXXXSVTTSMAEGARRRT 599
           +S+ LPIYICHD K+ID SK K +K   R GSS++               SM        
Sbjct: 37  DSVTLPIYICHDKKTIDSSKKKHDKPLVRNGSSVYSSKRVGSVSETLPCKSM-------- 88

Query: 598 EEPALDEVAVRAVISILSGYVGQYLRDEEFRGIIRERCYSCFVRKKKDSDNGIFANIELG 419
           EEPA+DE+A+RAV+SILSGYVG+Y +DE FR I+R++C  C +RK  + ++GI +N+E+G
Sbjct: 89  EEPAIDEIAIRAVVSILSGYVGRYSKDENFREIVRKKCNPCLIRKG-EMESGICSNLEMG 147

Query: 418 IESIEKLVESP-GTKQELRMKLLRNSISLLTVVASLNSKSSRNGSTSGTPNSHLSACAQL 242
           ++S+++LVE   G ++ELR+K  RNSI LL +V  + S  S   ST    +SHLSACAQL
Sbjct: 148 MKSVDRLVEEGHGNERELRIKASRNSIGLLNMV--ITSLDSAKNSTKNGAHSHLSACAQL 205

Query: 241 YLSIVYKLEKNDRISARHLLQVFCDSPFLARTHLLPDLWEHFFLPHLLHLKVWYGKELDL 62
           YL+IV K+EKN+R+SA+HLLQVFCDSP+ ARTHLLPDLWEHFFLPHLLHLKVWY +EL+ 
Sbjct: 206 YLAIVNKIEKNERVSAKHLLQVFCDSPYFARTHLLPDLWEHFFLPHLLHLKVWYNQELEF 265

Query: 61  ISNSDYRDKEKKMKDLSKVY 2
           +SN +   K++K+K L+KVY
Sbjct: 266 VSNFECEHKDRKIKALNKVY 285


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