BLASTX nr result

ID: Panax21_contig00032255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032255
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272711.1| PREDICTED: protein kinase PVPK-1-like [Vitis...    51   2e-09
ref|XP_002521471.1| serine/threonine protein kinase, putative [R...    45   1e-08

>ref|XP_002272711.1| PREDICTED: protein kinase PVPK-1-like [Vitis vinifera]
          Length = 678

 Score = 51.2 bits (121), Expect(2) = 2e-09
 Identities = 32/64 (50%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
 Frame = +3

Query: 3   GYNPSSATGTNRPPHPLSAKHSRYEGASSAS---VSDHGMKTSQTPTGLV---NHSYKIS 164
           GYN SS +GT+RP      K SR +GASSAS   V DHGMKT       V    HS+K +
Sbjct: 22  GYNLSSISGTSRPTRLPPPKQSRNDGASSASYATVPDHGMKTVLHAVDSVINEKHSHKTA 81

Query: 165 HDHM 176
            DHM
Sbjct: 82  QDHM 85



 Score = 35.4 bits (80), Expect(2) = 2e-09
 Identities = 24/50 (48%), Positives = 28/50 (56%)
 Frame = +2

Query: 182 EMLPDSSKDHFKSNQGNLEFVHSNKELDHTGEAYSQKHVLILETKSSIKH 331
           E L  SSK  +KSN+  L  V  N  LD   +  SQK V  +ETKS IKH
Sbjct: 88  EELHTSSKQLYKSNKDQL-VVGPNDVLDKMVKNSSQKQVSAVETKSCIKH 136


>ref|XP_002521471.1| serine/threonine protein kinase, putative [Ricinus communis]
           gi|223539370|gb|EEF40961.1| serine/threonine protein
           kinase, putative [Ricinus communis]
          Length = 676

 Score = 45.1 bits (105), Expect(2) = 1e-08
 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = +3

Query: 3   GYNPSSATGTNRPPHPLSAKHSRYEGASS---ASVSDHGMKTSQTPTGLVNHSYKISHDH 173
           G + S  +G   P  P SAK SRY+GASS   A V + GM           HSY+ +HD 
Sbjct: 22  GDDSSCTSGVPHPSRPPSAKQSRYKGASSMHYAGVRNPGMNHVNGSVANQKHSYRTAHDP 81

Query: 174 MRRK 185
           M+R+
Sbjct: 82  MQRE 85



 Score = 38.9 bits (89), Expect(2) = 1e-08
 Identities = 18/51 (35%), Positives = 31/51 (60%)
 Frame = +2

Query: 179 KEMLPDSSKDHFKSNQGNLEFVHSNKELDHTGEAYSQKHVLILETKSSIKH 331
           +E LP+ +K  +  N+   +FV   ++ D + E+  +K VL+LE KS +KH
Sbjct: 84  REELPNMAKHFYSLNKDKSQFVGPIEDFDQSAESSPEKKVLMLEGKSLVKH 134


Top