BLASTX nr result

ID: Panax21_contig00032249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032249
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]   229   2e-58
ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat...   228   3e-58
ref|XP_002511392.1| pentatricopeptide repeat-containing protein,...   228   5e-58
ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat...   225   3e-57
gb|ADN33897.1| pentatricopeptide (PPR) repeat-containing protein...   223   1e-56

>emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]
          Length = 513

 Score =  229 bits (584), Expect = 2e-58
 Identities = 113/140 (80%), Positives = 125/140 (89%)
 Frame = +2

Query: 2   PDEITFLGVLKACSHAGLADEARIYFARMHKYYGVEPSSDHYSCLVDVLSRAGRLHEAYK 181
           PD ITFLGVLKACSHAGLADEA  YF RM K YGVE SSDHYSC+VD LSRAGRL+EAY+
Sbjct: 282 PDGITFLGVLKACSHAGLADEALGYFGRMCKDYGVEASSDHYSCVVDALSRAGRLYEAYE 341

Query: 182 VIREMPVKVTAKAWGALLGACRTYGEMELAEIAGRALFELEPNNAANYVLMSRIYATAGR 361
           +I+ MPVK TAK WGALLGACRTYGE+ELAEIAGRALFELEP+NAANYVL++RIYA+ GR
Sbjct: 342 IIQGMPVKATAKTWGALLGACRTYGEVELAEIAGRALFELEPDNAANYVLLARIYASVGR 401

Query: 362 YDEAQGMRREMEERGVKAAP 421
           ++EAQ MRREM E GVKAAP
Sbjct: 402 HEEAQRMRREMNEMGVKAAP 421


>ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510 [Vitis vinifera] gi|298205226|emb|CBI17285.3|
           unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  228 bits (582), Expect = 3e-58
 Identities = 113/140 (80%), Positives = 125/140 (89%)
 Frame = +2

Query: 2   PDEITFLGVLKACSHAGLADEARIYFARMHKYYGVEPSSDHYSCLVDVLSRAGRLHEAYK 181
           PD ITFLGVLKACSHAGLADEA  YF RM K YGVE SSDHYSC+VD LSRAGRL+EAY+
Sbjct: 282 PDGITFLGVLKACSHAGLADEALGYFGRMCKDYGVEASSDHYSCVVDALSRAGRLYEAYE 341

Query: 182 VIREMPVKVTAKAWGALLGACRTYGEMELAEIAGRALFELEPNNAANYVLMSRIYATAGR 361
           +I+ MPVK TAK WGALLGACRTYGE+ELAEIAGRALFELEP+NAANYVL++RIYA+ GR
Sbjct: 342 IIQGMPVKSTAKTWGALLGACRTYGEVELAEIAGRALFELEPDNAANYVLLARIYASVGR 401

Query: 362 YDEAQGMRREMEERGVKAAP 421
           ++EAQ MRREM E GVKAAP
Sbjct: 402 HEEAQRMRREMNEMGVKAAP 421


>ref|XP_002511392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550507|gb|EEF51994.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  228 bits (580), Expect = 5e-58
 Identities = 110/140 (78%), Positives = 126/140 (90%)
 Frame = +2

Query: 2   PDEITFLGVLKACSHAGLADEARIYFARMHKYYGVEPSSDHYSCLVDVLSRAGRLHEAYK 181
           PD+ITFL VLKACSHAGLADEA  YF +M + Y ++  SDHYSCLVDVLSRAGRL+EAYK
Sbjct: 296 PDDITFLAVLKACSHAGLADEALDYFTKMQEGYRLQAVSDHYSCLVDVLSRAGRLYEAYK 355

Query: 182 VIREMPVKVTAKAWGALLGACRTYGEMELAEIAGRALFELEPNNAANYVLMSRIYATAGR 361
           VI+EMPVKVTAKAWGALLGACRTYGE+ELAEI GRALFE+EP+N ANYVL++RIYA+ GR
Sbjct: 356 VIQEMPVKVTAKAWGALLGACRTYGEIELAEIVGRALFEIEPDNPANYVLLARIYASVGR 415

Query: 362 YDEAQGMRREMEERGVKAAP 421
           YDEAQ +RREM+ERGVK +P
Sbjct: 416 YDEAQRIRREMKERGVKVSP 435


>ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510-like [Cucumis sativus]
          Length = 391

 Score =  225 bits (574), Expect = 3e-57
 Identities = 107/140 (76%), Positives = 125/140 (89%)
 Frame = +2

Query: 2   PDEITFLGVLKACSHAGLADEARIYFARMHKYYGVEPSSDHYSCLVDVLSRAGRLHEAYK 181
           PDEITF+GVLKACSH GLA+EA  YF RM + YG++ SSDHYSCLVDVLSRAGRLHEAY 
Sbjct: 243 PDEITFIGVLKACSHVGLANEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYD 302

Query: 182 VIREMPVKVTAKAWGALLGACRTYGEMELAEIAGRALFELEPNNAANYVLMSRIYATAGR 361
           +IREMPV+VTAKAWGALLGACR YGE+ELAEIAG+ALFE+EP NAANYVL++++YA+ GR
Sbjct: 303 IIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASVGR 362

Query: 362 YDEAQGMRREMEERGVKAAP 421
           ++EAQ MRREM+ER VK  P
Sbjct: 363 HEEAQRMRREMKERRVKVVP 382


>gb|ADN33897.1| pentatricopeptide (PPR) repeat-containing protein [Cucumis melo
           subsp. melo]
          Length = 391

 Score =  223 bits (568), Expect = 1e-56
 Identities = 106/140 (75%), Positives = 124/140 (88%)
 Frame = +2

Query: 2   PDEITFLGVLKACSHAGLADEARIYFARMHKYYGVEPSSDHYSCLVDVLSRAGRLHEAYK 181
           PD ITF+GVLKACSH GLADEA  YF RM + YG++ SSDHYSCLVDVLSRAGRLHEA+ 
Sbjct: 243 PDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHD 302

Query: 182 VIREMPVKVTAKAWGALLGACRTYGEMELAEIAGRALFELEPNNAANYVLMSRIYATAGR 361
           +IREMPV+VTAKAWGALLGACR YGE+ELAEIAG+ALFE+EP NAANYVL++++YA+ GR
Sbjct: 303 IIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASVGR 362

Query: 362 YDEAQGMRREMEERGVKAAP 421
           ++EAQ MRREM+ER VK  P
Sbjct: 363 HEEAQRMRREMKERRVKVVP 382


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