BLASTX nr result

ID: Panax21_contig00032231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032231
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533347.1| glucose-1-phosphate adenylyltransferase, put...   125   1e-26
ref|XP_002331645.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002310375.1| predicted protein [Populus trichocarpa] gi|2...   119   6e-25
emb|CBI24766.3| unnamed protein product [Vitis vinifera]              109   2e-24
ref|XP_002892303.1| ADP-glucose pyrophoshorylase small subunit 2...   116   4e-24

>ref|XP_002533347.1| glucose-1-phosphate adenylyltransferase, putative [Ricinus
           communis] gi|223526812|gb|EEF29032.1|
           glucose-1-phosphate adenylyltransferase, putative
           [Ricinus communis]
          Length = 481

 Score =  125 bits (313), Expect = 1e-26
 Identities = 61/73 (83%), Positives = 65/73 (89%)
 Frame = +3

Query: 486 PLTKRRSEGAIPIAGNYRLIDGVVSNCINSNITKIYVLTQYNSTSLNSHLSRAYSGARLA 665
           PLTKRRSEGAIPIA NYRLID V+SNCINSNI KIY +TQ+NSTSLNSHLSRAY+G  L 
Sbjct: 77  PLTKRRSEGAIPIAANYRLIDAVISNCINSNINKIYAITQFNSTSLNSHLSRAYNGIGLG 136

Query: 666 NEGFVEVIAAYQS 704
            EGFVEVIAAYQS
Sbjct: 137 KEGFVEVIAAYQS 149


>ref|XP_002331645.1| predicted protein [Populus trichocarpa] gi|222874041|gb|EEF11172.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  124 bits (312), Expect = 1e-26
 Identities = 60/73 (82%), Positives = 64/73 (87%)
 Frame = +3

Query: 486 PLTKRRSEGAIPIAGNYRLIDGVVSNCINSNITKIYVLTQYNSTSLNSHLSRAYSGARLA 665
           PLTKRRSEGAIPI  NYR++D V+SNCINSNI KIY LTQYNSTSLNSHLSRAY+G  L 
Sbjct: 24  PLTKRRSEGAIPIGANYRIVDAVISNCINSNINKIYALTQYNSTSLNSHLSRAYAGLGLG 83

Query: 666 NEGFVEVIAAYQS 704
            EGFVEVIAAYQS
Sbjct: 84  KEGFVEVIAAYQS 96


>ref|XP_002310375.1| predicted protein [Populus trichocarpa] gi|222853278|gb|EEE90825.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  119 bits (298), Expect = 6e-25
 Identities = 57/73 (78%), Positives = 62/73 (84%)
 Frame = +3

Query: 486 PLTKRRSEGAIPIAGNYRLIDGVVSNCINSNITKIYVLTQYNSTSLNSHLSRAYSGARLA 665
           PLTKRRSEGAIP+   YR++D V+SNCINSNI KIY LTQYNST LNSHLSRAYSG  L 
Sbjct: 25  PLTKRRSEGAIPLGAKYRIVDAVISNCINSNINKIYALTQYNSTYLNSHLSRAYSGLGLG 84

Query: 666 NEGFVEVIAAYQS 704
            +GFVEVIAAYQS
Sbjct: 85  KDGFVEVIAAYQS 97


>emb|CBI24766.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  109 bits (272), Expect(2) = 2e-24
 Identities = 57/73 (78%), Positives = 61/73 (83%)
 Frame = +3

Query: 486 PLTKRRSEGAIPIAGNYRLIDGVVSNCINSNITKIYVLTQYNSTSLNSHLSRAYSGARLA 665
           PLTKRRSEGA+ IAG+YRLID VVSNCINSNITKIY LTQ+NSTSLNSHL RAYSG  L 
Sbjct: 72  PLTKRRSEGAVHIAGSYRLIDAVVSNCINSNITKIYALTQFNSTSLNSHLCRAYSGVGL- 130

Query: 666 NEGFVEVIAAYQS 704
                EV+AAYQS
Sbjct: 131 -----EVVAAYQS 138



 Score = 29.3 bits (64), Expect(2) = 2e-24
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 353 MVVLQLSLPTCLS--IRSKLPRYREKPPLKLTSICPSSS 463
           MV+LQL+LPT  S  +R KLP    K      S+C S+S
Sbjct: 1   MVILQLALPTTSSANLRPKLPSLGGKQATVPPSLCVSNS 39


>ref|XP_002892303.1| ADP-glucose pyrophoshorylase small subunit 2 [Arabidopsis lyrata
           subsp. lyrata] gi|297338145|gb|EFH68562.1| ADP-glucose
           pyrophoshorylase small subunit 2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 479

 Score =  116 bits (291), Expect = 4e-24
 Identities = 57/73 (78%), Positives = 64/73 (87%)
 Frame = +3

Query: 486 PLTKRRSEGAIPIAGNYRLIDGVVSNCINSNITKIYVLTQYNSTSLNSHLSRAYSGARLA 665
           PLTK RS+GAIPIA NYRLID V+SNCINS+ITKIY +TQ+NSTSLNSHLS+AYSG  L 
Sbjct: 73  PLTKTRSKGAIPIAANYRLIDAVISNCINSDITKIYAITQFNSTSLNSHLSKAYSGFGLG 132

Query: 666 NEGFVEVIAAYQS 704
            + FVEVIAAYQS
Sbjct: 133 KDRFVEVIAAYQS 145


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