BLASTX nr result
ID: Panax21_contig00032218
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00032218 (585 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002528998.1| DNA binding protein, putative [Ricinus commu... 177 2e-42 ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi... 174 8e-42 ref|XP_002300622.1| chromatin remodeling complex subunit [Populu... 170 2e-40 ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik... 169 3e-40 ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik... 169 3e-40 >ref|XP_002528998.1| DNA binding protein, putative [Ricinus communis] gi|223531538|gb|EEF33368.1| DNA binding protein, putative [Ricinus communis] Length = 482 Score = 177 bits (448), Expect = 2e-42 Identities = 81/107 (75%), Positives = 94/107 (87%), Gaps = 1/107 (0%) Frame = -1 Query: 333 DVILIPSHSRWFSWSSIHECEVRFLPEFFEGRSASKNPRVYKYYRNSIIQRFRE-NPNRK 157 DV+ IPS+SRWFSW+SIHECEVRFLP+FF+ RS SKNPRVYKYYRNSII+ FR+ NP+ K Sbjct: 61 DVVHIPSYSRWFSWNSIHECEVRFLPDFFDSRSPSKNPRVYKYYRNSIIKCFRQNNPSVK 120 Query: 156 ITFTEARKTIIGDVGSVRRIFDFLETWGLINYLGSPSSKPQKWEDKE 16 ITFTE RKT++GDVGS+RR+FDFLE WGLINY S SKP KWEDK+ Sbjct: 121 ITFTEVRKTLVGDVGSIRRVFDFLEAWGLINYFPSALSKPLKWEDKD 167 >ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera] gi|297745602|emb|CBI40767.3| unnamed protein product [Vitis vinifera] Length = 492 Score = 174 bits (442), Expect = 8e-42 Identities = 75/106 (70%), Positives = 92/106 (86%) Frame = -1 Query: 333 DVILIPSHSRWFSWSSIHECEVRFLPEFFEGRSASKNPRVYKYYRNSIIQRFRENPNRKI 154 + I IPS+SRWFSW+++HECEVRFLPEFF+ RS SKNPRVYKYYRNSII FR+NP+RK+ Sbjct: 56 ETINIPSYSRWFSWNNVHECEVRFLPEFFDARSPSKNPRVYKYYRNSIILSFRQNPSRKL 115 Query: 153 TFTEARKTIIGDVGSVRRIFDFLETWGLINYLGSPSSKPQKWEDKE 16 TFT+ RK ++GDVGS+RR+FDFLE WGLINY GS +P KWE+K+ Sbjct: 116 TFTDVRKILVGDVGSIRRVFDFLEAWGLINYSGSALKQPLKWEEKD 161 >ref|XP_002300622.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222842348|gb|EEE79895.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 500 Score = 170 bits (430), Expect = 2e-40 Identities = 76/104 (73%), Positives = 90/104 (86%) Frame = -1 Query: 333 DVILIPSHSRWFSWSSIHECEVRFLPEFFEGRSASKNPRVYKYYRNSIIQRFRENPNRKI 154 DV+ IPS+SRWFSW +IHECEVRFLPEFF+ RS SKNP VYKYYRNSII +FR+NP+ K+ Sbjct: 48 DVVHIPSYSRWFSWDNIHECEVRFLPEFFDSRSPSKNPSVYKYYRNSIISQFRKNPSAKL 107 Query: 153 TFTEARKTIIGDVGSVRRIFDFLETWGLINYLGSPSSKPQKWED 22 TFTE RKT++GDVGS+RR+FDFL+ WGLINY SP +K KWED Sbjct: 108 TFTEIRKTLVGDVGSIRRVFDFLDAWGLINY--SPLNKQLKWED 149 >ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus] Length = 555 Score = 169 bits (428), Expect = 3e-40 Identities = 74/107 (69%), Positives = 91/107 (85%) Frame = -1 Query: 333 DVILIPSHSRWFSWSSIHECEVRFLPEFFEGRSASKNPRVYKYYRNSIIQRFRENPNRKI 154 D I +PS+SRWFSW+ IHECEVRFLPEFF+ RS SKNPRVYKY RNSI++ FRE P++KI Sbjct: 127 DPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKI 186 Query: 153 TFTEARKTIIGDVGSVRRIFDFLETWGLINYLGSPSSKPQKWEDKET 13 TFT+ RKT++ DVGS+RR+FDFLE WGLINY S SKP KW+D+++ Sbjct: 187 TFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDS 233 >ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus] Length = 493 Score = 169 bits (428), Expect = 3e-40 Identities = 74/107 (69%), Positives = 91/107 (85%) Frame = -1 Query: 333 DVILIPSHSRWFSWSSIHECEVRFLPEFFEGRSASKNPRVYKYYRNSIIQRFRENPNRKI 154 D I +PS+SRWFSW+ IHECEVRFLPEFF+ RS SKNPRVYKY RNSI++ FRE P++KI Sbjct: 65 DPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKI 124 Query: 153 TFTEARKTIIGDVGSVRRIFDFLETWGLINYLGSPSSKPQKWEDKET 13 TFT+ RKT++ DVGS+RR+FDFLE WGLINY S SKP KW+D+++ Sbjct: 125 TFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDS 171