BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032190
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15850.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   136   2e-30
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   136   2e-30
ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus ...   128   4e-28
ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidops...   125   5e-27

>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  136 bits (343), Expect = 2e-30
 Identities = 78/130 (60%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
 Frame = -2

Query: 385 VVSSLRMAXXXXXXXXXXSYLRFSNPRL--PLVLRFSSASPSPVINNLKTLDCSDQPHKW 212
           VVSSLR            S LRFSNPR+     L  SS+S S V  +    +      KW
Sbjct: 2   VVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTES----NPDQSVQKW 57

Query: 211 EPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLPTIEGELESAIYKAGGIRDSNFGNLQKIG 32
           E FRKKKVVMRVGYVGT+YRGLQ Q DE  L TIEGELE+A++KAGGIRDSN+GNL KIG
Sbjct: 58  ESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKIG 117

Query: 31  WAKSSRTDKG 2
           W +SSRTDKG
Sbjct: 118 WDRSSRTDKG 127


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
           vinifera]
          Length = 564

 Score =  136 bits (343), Expect = 2e-30
 Identities = 78/130 (60%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
 Frame = -2

Query: 385 VVSSLRMAXXXXXXXXXXSYLRFSNPRL--PLVLRFSSASPSPVINNLKTLDCSDQPHKW 212
           VVSSLR            S LRFSNPR+     L  SS+S S V  +    +      KW
Sbjct: 2   VVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTES----NPDQSVQKW 57

Query: 211 EPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLPTIEGELESAIYKAGGIRDSNFGNLQKIG 32
           E FRKKKVVMRVGYVGT+YRGLQ Q DE  L TIEGELE+A++KAGGIRDSN+GNL KIG
Sbjct: 58  ESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKIG 117

Query: 31  WAKSSRTDKG 2
           W +SSRTDKG
Sbjct: 118 WDRSSRTDKG 127


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  136 bits (343), Expect = 2e-30
 Identities = 78/130 (60%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
 Frame = -2

Query: 385 VVSSLRMAXXXXXXXXXXSYLRFSNPRL--PLVLRFSSASPSPVINNLKTLDCSDQPHKW 212
           VVSSLR            S LRFSNPR+     L  SS+S S V  +    +      KW
Sbjct: 2   VVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTES----NPDQSVQKW 57

Query: 211 EPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLPTIEGELESAIYKAGGIRDSNFGNLQKIG 32
           E FRKKKVVMRVGYVGT+YRGLQ Q DE  L TIEGELE+A++KAGGIRDSN+GNL KIG
Sbjct: 58  ESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKIG 117

Query: 31  WAKSSRTDKG 2
           W +SSRTDKG
Sbjct: 118 WDRSSRTDKG 127


>ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223543132|gb|EEF44666.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 377

 Score =  128 bits (322), Expect = 4e-28
 Identities = 74/119 (62%), Positives = 80/119 (67%), Gaps = 11/119 (9%)
 Frame = -2

Query: 325 LRFSNPRLPLVLRFSSASPSPVINNLKTLDC-----SDQPH------KWEPFRKKKVVMR 179
           LRF  P  PL+LR    SP  V      +       S Q H      KWEPFRKKKVV+R
Sbjct: 6   LRF--PLYPLLLR----SPRRVFFKFPVIPILPSRLSSQSHAHILSQKWEPFRKKKVVLR 59

Query: 178 VGYVGTDYRGLQKQMDEHLLPTIEGELESAIYKAGGIRDSNFGNLQKIGWAKSSRTDKG 2
           VGYVGTDYRGLQKQ DEH L TIE ELE AI+KAGGI DSN+GNL KI WA+SSRTDKG
Sbjct: 60  VGYVGTDYRGLQKQEDEHSLSTIEAELECAIFKAGGILDSNYGNLHKIAWARSSRTDKG 118


>ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidopsis thaliana]
           gi|3914486|sp|O22928.1|PUSH_ARATH RecName: Full=Putative
           tRNA pseudouridine synthase; AltName: Full=tRNA
           pseudouridylate synthase; AltName: Full=tRNA-uridine
           isomerase gi|2347206|gb|AAC16945.1| putative
           pseudouridine synthase [Arabidopsis thaliana]
           gi|330253276|gb|AEC08370.1| putative tRNA pseudouridine
           synthase [Arabidopsis thaliana]
          Length = 510

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
 Frame = -2

Query: 301 PLVLRFSSASPSPVINNLKTLDCSDQ--PHKWEPFRKKKVVMRVGYVGTDYRGLQKQMDE 128
           P +LRFSS++     +   +   SD     KWE +RKKKVV+R+GYVGTDYRGLQ Q D+
Sbjct: 26  PALLRFSSSAAFQPSSTSLSPPSSDNFLADKWESYRKKKVVIRIGYVGTDYRGLQIQRDD 85

Query: 127 HLLPTIEGELESAIYKAGGIRDSNFGNLQKIGWAKSSRTDKG 2
             + TIEGELE AIYKAGGIRDSN+G+L KIGWA+SSRTDKG
Sbjct: 86  PSIKTIEGELEVAIYKAGGIRDSNYGDLHKIGWARSSRTDKG 127