BLASTX nr result

ID: Panax21_contig00032179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032179
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519715.1| mads box protein, putative [Ricinus communis...   114   2e-23
ref|NP_180991.1| protein agamous-like 29 [Arabidopsis thaliana] ...   114   2e-23
ref|XP_002305331.1| predicted protein [Populus trichocarpa] gi|2...   113   4e-23
ref|XP_002298313.1| predicted protein [Populus trichocarpa] gi|2...   113   5e-23
gb|ABK28522.1| unknown [Arabidopsis thaliana]                         112   6e-23

>ref|XP_002519715.1| mads box protein, putative [Ricinus communis]
           gi|223541132|gb|EEF42688.1| mads box protein, putative
           [Ricinus communis]
          Length = 220

 Score =  114 bits (286), Expect = 2e-23
 Identities = 58/128 (45%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
 Frame = +2

Query: 26  MPGRK-SQGRRKIEMKPIQSESDRMVAFSKRRNGLFKKASELATLCGVEIAIIIFSLSGK 202
           M G+K ++GR+KI MK I++E DR++ FSKRR+G++KKASEL TLCG E+ I++FS +GK
Sbjct: 1   MAGKKQTKGRQKITMKRIENEEDRLITFSKRRSGIYKKASELITLCGAEVGILVFSPAGK 60

Query: 203 PFSFGSPSVESVLDRFSKENNMDEQSDDHXXXXXXXXXXXXKDLDQELDEINQKVAAEKK 382
           PFSFG PS+ES+ +RF  +N     SD+              +L+++ +E+  ++ +EK+
Sbjct: 61  PFSFGHPSLESIANRFLGKN--VPPSDNTHPLVEAHRKMRINELNKQYNELLNRLESEKE 118

Query: 383 RGQMLQQT 406
           RG ML++T
Sbjct: 119 RGSMLKKT 126


>ref|NP_180991.1| protein agamous-like 29 [Arabidopsis thaliana]
           gi|3128222|gb|AAC26702.1| MADS-box protein (AGL29)
           [Arabidopsis thaliana] gi|20197155|gb|AAM14943.1|
           MADS-box protein (AGL29) [Arabidopsis thaliana]
           gi|91806315|gb|ABE65885.1| MADS-box family protein
           [Arabidopsis thaliana] gi|330253880|gb|AEC08974.1|
           protein agamous-like 29 [Arabidopsis thaliana]
          Length = 172

 Score =  114 bits (285), Expect = 2e-23
 Identities = 58/123 (47%), Positives = 81/123 (65%)
 Frame = +2

Query: 47  GRRKIEMKPIQSESDRMVAFSKRRNGLFKKASELATLCGVEIAIIIFSLSGKPFSFGSPS 226
           GRRKI+M+ +Q  + R V FSKRR GLFKKASELATLC  E+ I++FS  GKPFS+G P+
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 227 VESVLDRFSKENNMDEQSDDHXXXXXXXXXXXXKDLDQELDEINQKVAAEKKRGQMLQQT 406
           ++SV +RF +E +  +  D+             K L + LD +NQ+V AEK+RG+  Q+ 
Sbjct: 62  LDSVAERFMREYDDSDSGDEE---KSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEK 118

Query: 407 TDS 415
            +S
Sbjct: 119 LES 121


>ref|XP_002305331.1| predicted protein [Populus trichocarpa] gi|222848295|gb|EEE85842.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  113 bits (283), Expect = 4e-23
 Identities = 56/133 (42%), Positives = 91/133 (68%)
 Frame = +2

Query: 26  MPGRKSQGRRKIEMKPIQSESDRMVAFSKRRNGLFKKASELATLCGVEIAIIIFSLSGKP 205
           M G++++GR+KI +K I++E DR++ FSKRR+G++KKASEL TLCG E+A+++FS +GK 
Sbjct: 1   MEGKQTRGRQKIAIKRIENEDDRLITFSKRRSGIYKKASELVTLCGAEVAVLVFSPAGKA 60

Query: 206 FSFGSPSVESVLDRFSKENNMDEQSDDHXXXXXXXXXXXXKDLDQELDEINQKVAAEKKR 385
           FSFG PS+ESV +RF  +N     +D+              +L+Q+ +E+  ++ AE+ R
Sbjct: 61  FSFGHPSIESVANRFLGQN--IAPNDNTHPLVEAHRKVRINELNQQHNELLSEMEAERDR 118

Query: 386 GQMLQQTTDSFDS 424
           G++L++ T    S
Sbjct: 119 GKVLKEGTSEKSS 131


>ref|XP_002298313.1| predicted protein [Populus trichocarpa] gi|222845571|gb|EEE83118.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  113 bits (282), Expect = 5e-23
 Identities = 60/133 (45%), Positives = 90/133 (67%)
 Frame = +2

Query: 26  MPGRKSQGRRKIEMKPIQSESDRMVAFSKRRNGLFKKASELATLCGVEIAIIIFSLSGKP 205
           M  +K++GR+K+EMK I+++ DR++ FSKRR+G++KKASELATL G EIAI +FS +GKP
Sbjct: 1   MASKKTKGRQKVEMKRIENQDDRLITFSKRRSGIYKKASELATLTGAEIAIAVFSPAGKP 60

Query: 206 FSFGSPSVESVLDRFSKENNMDEQSDDHXXXXXXXXXXXXKDLDQELDEINQKVAAEKKR 385
           FSFG PSVESV++RF  E+ +D  S  H            ++L Q+ +++  ++  EK++
Sbjct: 61  FSFGHPSVESVINRF-LEDPLDMDSTYH--LVEAHRRMRIEELTQKHNDMQHQLDEEKEK 117

Query: 386 GQMLQQTTDSFDS 424
           G  L+      DS
Sbjct: 118 GLKLKSKIKEMDS 130


>gb|ABK28522.1| unknown [Arabidopsis thaliana]
          Length = 173

 Score =  112 bits (281), Expect = 6e-23
 Identities = 57/123 (46%), Positives = 81/123 (65%)
 Frame = +2

Query: 47  GRRKIEMKPIQSESDRMVAFSKRRNGLFKKASELATLCGVEIAIIIFSLSGKPFSFGSPS 226
           GRRKI+M+ +Q  + R V FSKRR GLFKKASELATLC  ++ I++FS  GKPFS+G P+
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAKLGIVVFSPGGKPFSYGKPN 61

Query: 227 VESVLDRFSKENNMDEQSDDHXXXXXXXXXXXXKDLDQELDEINQKVAAEKKRGQMLQQT 406
           ++SV +RF +E +  +  D+             K L + LD +NQ+V AEK+RG+  Q+ 
Sbjct: 62  LDSVAERFMREYDDSDSGDEE---KSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEK 118

Query: 407 TDS 415
            +S
Sbjct: 119 LES 121


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