BLASTX nr result

ID: Panax21_contig00032175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032175
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_002525383.1| Polygalacturonase-1 non-catalytic subunit be...   100   1e-19
ref|XP_003517743.1| PREDICTED: probable polygalacturonase non-ca...    98   6e-19
ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_003519820.1| PREDICTED: probable polygalacturonase non-ca...    96   3e-18

>ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|222863660|gb|EEF00791.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score =  102 bits (255), Expect = 3e-20
 Identities = 47/69 (68%), Positives = 53/69 (76%)
 Frame = +3

Query: 300 LADQNALPTHLPQFCSSAKLLCFPDVSPSLEKHDQNVDFSSYLDRNFTNYGTLKGGDTDS 479
           LA QNAL T  P FCSSAKL CFPD+SPSLEKHDQ+  F+ Y ++NFTNYGT + G  DS
Sbjct: 62  LASQNALSTQFPAFCSSAKLFCFPDLSPSLEKHDQDSHFAFYFNKNFTNYGTGRAGGADS 121

Query: 480 FDNYSDGEN 506
           F NYSDG N
Sbjct: 122 FKNYSDGVN 130


>ref|XP_002525383.1| Polygalacturonase-1 non-catalytic subunit beta precursor, putative
           [Ricinus communis] gi|223535346|gb|EEF37021.1|
           Polygalacturonase-1 non-catalytic subunit beta
           precursor, putative [Ricinus communis]
          Length = 631

 Score =  100 bits (250), Expect = 1e-19
 Identities = 45/69 (65%), Positives = 56/69 (81%)
 Frame = +3

Query: 300 LADQNALPTHLPQFCSSAKLLCFPDVSPSLEKHDQNVDFSSYLDRNFTNYGTLKGGDTDS 479
           LA QNAL T LP FCSSAKLLCFPD+SPSLEKHD++ +F++YL++NFTNYG    G  ++
Sbjct: 80  LAAQNALSTKLPAFCSSAKLLCFPDLSPSLEKHDRDTNFANYLNKNFTNYGNEMAGGVNA 139

Query: 480 FDNYSDGEN 506
           F NYSD +N
Sbjct: 140 FKNYSDNDN 148


>ref|XP_003517743.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like [Glycine max]
          Length = 629

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/69 (63%), Positives = 55/69 (79%)
 Frame = +3

Query: 300 LADQNALPTHLPQFCSSAKLLCFPDVSPSLEKHDQNVDFSSYLDRNFTNYGTLKGGDTDS 479
           LA  NAL T LP+FC++AKLLCFP+V  SLEKHD++ +F+ Y D+NFTNYGT + G  DS
Sbjct: 75  LASGNALSTRLPEFCAAAKLLCFPEVGSSLEKHDKDANFAVYRDKNFTNYGTGRPGGLDS 134

Query: 480 FDNYSDGEN 506
           F NYS+GEN
Sbjct: 135 FKNYSEGEN 143


>ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|222851597|gb|EEE89144.1|
           predicted protein [Populus trichocarpa]
          Length = 598

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/69 (63%), Positives = 53/69 (76%)
 Frame = +3

Query: 300 LADQNALPTHLPQFCSSAKLLCFPDVSPSLEKHDQNVDFSSYLDRNFTNYGTLKGGDTDS 479
           LA QNAL   LP FCSSA+L CFPD+SPSLEKHD +  F+ Y ++NF+NYGT + G  DS
Sbjct: 46  LASQNALSAQLPAFCSSAELFCFPDLSPSLEKHDHDSHFAIYNNKNFSNYGTDRAGGADS 105

Query: 480 FDNYSDGEN 506
           F NYSDG+N
Sbjct: 106 FKNYSDGDN 114


>ref|XP_003519820.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like [Glycine max]
          Length = 611

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 42/69 (60%), Positives = 53/69 (76%)
 Frame = +3

Query: 300 LADQNALPTHLPQFCSSAKLLCFPDVSPSLEKHDQNVDFSSYLDRNFTNYGTLKGGDTDS 479
           L   N+L T LP+FC++AKLLCFP+V P LEKHD++ +F+ Y D NFTNYGT + G  DS
Sbjct: 59  LVSGNSLSTRLPEFCAAAKLLCFPEVGPRLEKHDKDANFAVYRDNNFTNYGTGRPGGLDS 118

Query: 480 FDNYSDGEN 506
           F NYS+GEN
Sbjct: 119 FKNYSEGEN 127


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