BLASTX nr result

ID: Panax21_contig00032153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032153
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis...   265   4e-69
ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus ...   259   2e-67
ref|XP_002305854.1| histone deacetylase [Populus trichocarpa] gi...   251   6e-65
ref|XP_004138195.1| PREDICTED: histone deacetylase 5-like [Cucum...   250   7e-65
ref|NP_200914.2| histone deacetylase 5 [Arabidopsis thaliana] gi...   248   4e-64

>ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis vinifera]
           gi|297733877|emb|CBI15124.3| unnamed protein product
           [Vitis vinifera]
          Length = 646

 Score =  265 bits (676), Expect = 4e-69
 Identities = 125/151 (82%), Positives = 139/151 (92%)
 Frame = -3

Query: 466 GAGYNINVPWENGRCGDVDYLAVWEHILIPVAKEYNPDLIIISAGFDAAINDPLGGCCLT 287
           GAGYNINVPWENGRCGD DYLAVW+HILIPVAK++NPD++IISAGFDAAI DPLGGC +T
Sbjct: 230 GAGYNINVPWENGRCGDADYLAVWDHILIPVAKDFNPDIVIISAGFDAAIGDPLGGCHVT 289

Query: 286 PYGYSVMLKKLMEFAGGRIVMALEGGYNLDSIANSVLACVEVLLEDKNIAESSEVYPFES 107
           PYGYSVMLKKLMEF+ G+I+MALEGGYNL S+ANSVLACVEVLLEDK IA SSE YPFES
Sbjct: 290 PYGYSVMLKKLMEFSEGKIIMALEGGYNLVSLANSVLACVEVLLEDKPIAGSSEAYPFES 349

Query: 106 TWRVIQVVREELSAYWPILATKLPEKLTSRK 14
           TWRVIQ VR+ELSA+WP LA +LP+KLTS K
Sbjct: 350 TWRVIQAVRQELSAFWPTLADELPKKLTSCK 380


>ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus communis]
           gi|223546264|gb|EEF47766.1| histone deacetylase hda1,
           putative [Ricinus communis]
          Length = 654

 Score =  259 bits (661), Expect = 2e-67
 Identities = 122/153 (79%), Positives = 136/153 (88%)
 Frame = -3

Query: 466 GAGYNINVPWENGRCGDVDYLAVWEHILIPVAKEYNPDLIIISAGFDAAINDPLGGCCLT 287
           GAGYNINVPWENGRCGD DYLAVW+HILIPVAKE+NPD+IIISAGFDAA+ DPLGGC +T
Sbjct: 233 GAGYNINVPWENGRCGDADYLAVWDHILIPVAKEFNPDMIIISAGFDAAVGDPLGGCRIT 292

Query: 286 PYGYSVMLKKLMEFAGGRIVMALEGGYNLDSIANSVLACVEVLLEDKNIAESSEVYPFES 107
           PYGYSVMLKKLM+FA G+IV+ALEGGYNL+SIANS  AC+EVLLE K IA SSE YPFES
Sbjct: 293 PYGYSVMLKKLMDFANGKIVLALEGGYNLESIANSFFACMEVLLESKPIAGSSEAYPFES 352

Query: 106 TWRVIQVVREELSAYWPILATKLPEKLTSRKTP 8
           TWRVIQ VR++LS YW  LA +LP KLTS+K P
Sbjct: 353 TWRVIQAVRKKLSGYWATLADELPLKLTSQKGP 385


>ref|XP_002305854.1| histone deacetylase [Populus trichocarpa]
           gi|222848818|gb|EEE86365.1| histone deacetylase [Populus
           trichocarpa]
          Length = 646

 Score =  251 bits (640), Expect = 6e-65
 Identities = 114/153 (74%), Positives = 135/153 (88%)
 Frame = -3

Query: 466 GAGYNINVPWENGRCGDVDYLAVWEHILIPVAKEYNPDLIIISAGFDAAINDPLGGCCLT 287
           G GYNINVPWE+ RCGD DYLAVW+HILIPVAK+++PD+II+SAGFDAA+ DPLGGCC+T
Sbjct: 226 GTGYNINVPWEHARCGDADYLAVWDHILIPVAKKFDPDMIIVSAGFDAAVGDPLGGCCVT 285

Query: 286 PYGYSVMLKKLMEFAGGRIVMALEGGYNLDSIANSVLACVEVLLEDKNIAESSEVYPFES 107
           PYGYSVMLKKLM+FA G+I++ALEGGYNLDSIANS LAC++VLLEDK ++ S E YPFES
Sbjct: 286 PYGYSVMLKKLMDFAQGKIMLALEGGYNLDSIANSFLACMKVLLEDKPVSGSVEAYPFES 345

Query: 106 TWRVIQVVREELSAYWPILATKLPEKLTSRKTP 8
           TWRVIQ VR++LS YWP LA +LP KLT +  P
Sbjct: 346 TWRVIQAVRKKLSPYWPALADELPLKLTIQNAP 378


>ref|XP_004138195.1| PREDICTED: histone deacetylase 5-like [Cucumis sativus]
          Length = 659

 Score =  250 bits (639), Expect = 7e-65
 Identities = 109/153 (71%), Positives = 135/153 (88%)
 Frame = -3

Query: 466 GAGYNINVPWENGRCGDVDYLAVWEHILIPVAKEYNPDLIIISAGFDAAINDPLGGCCLT 287
           GAGYNINVPWENGRCGD DYLAVW+HIL+PVA+EYNPD+I++SAGFDAA+ DPLGGCC+T
Sbjct: 239 GAGYNINVPWENGRCGDADYLAVWDHILLPVAEEYNPDMIMVSAGFDAAVGDPLGGCCVT 298

Query: 286 PYGYSVMLKKLMEFAGGRIVMALEGGYNLDSIANSVLACVEVLLEDKNIAESSEVYPFES 107
           PYGYS+MLKKLM  A G+IV+ALEGGYNLDSIA+S+LAC E+LL+ + + +  E YPFES
Sbjct: 299 PYGYSIMLKKLMNLAQGKIVLALEGGYNLDSIASSMLACAELLLDGRTVNKPQETYPFES 358

Query: 106 TWRVIQVVREELSAYWPILATKLPEKLTSRKTP 8
           TW+VIQ VR+ELS +WPIL+ ++P+ L S+K P
Sbjct: 359 TWQVIQAVRQELSPFWPILSDEIPDNLISKKVP 391


>ref|NP_200914.2| histone deacetylase 5 [Arabidopsis thaliana]
           gi|75247631|sp|Q8RX28.1|HDA5_ARATH RecName: Full=Histone
           deacetylase 5 gi|20259320|gb|AAM13986.1| putative
           histone deacetylase [Arabidopsis thaliana]
           gi|21539579|gb|AAM53342.1| histone deacetylase-like
           protein [Arabidopsis thaliana]
           gi|23197730|gb|AAN15392.1| histone deacetylase-like
           protein [Arabidopsis thaliana]
           gi|332010034|gb|AED97417.1| histone deacetylase 5
           [Arabidopsis thaliana]
          Length = 660

 Score =  248 bits (633), Expect = 4e-64
 Identities = 115/153 (75%), Positives = 130/153 (84%)
 Frame = -3

Query: 466 GAGYNINVPWENGRCGDVDYLAVWEHILIPVAKEYNPDLIIISAGFDAAINDPLGGCCLT 287
           G G+NINVPW+ GRCGD DYLA W+HILIPVA+E+NPD+I +SAGFDAAINDPLGGCC+T
Sbjct: 245 GEGFNINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVT 304

Query: 286 PYGYSVMLKKLMEFAGGRIVMALEGGYNLDSIANSVLACVEVLLEDKNIAESSEVYPFES 107
           PYGYSVMLKKLMEFA G+IV+ALEGGYNLDSIA S LACV+VLLEDK I    E YPFES
Sbjct: 305 PYGYSVMLKKLMEFAQGKIVLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEAYPFES 364

Query: 106 TWRVIQVVREELSAYWPILATKLPEKLTSRKTP 8
           TWRVIQ VR+ L  YWP LA +L  KL ++KTP
Sbjct: 365 TWRVIQAVRKRLCTYWPSLADELSWKLINQKTP 397


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