BLASTX nr result
ID: Panax21_contig00032153
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00032153 (468 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis... 265 4e-69 ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus ... 259 2e-67 ref|XP_002305854.1| histone deacetylase [Populus trichocarpa] gi... 251 6e-65 ref|XP_004138195.1| PREDICTED: histone deacetylase 5-like [Cucum... 250 7e-65 ref|NP_200914.2| histone deacetylase 5 [Arabidopsis thaliana] gi... 248 4e-64 >ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis vinifera] gi|297733877|emb|CBI15124.3| unnamed protein product [Vitis vinifera] Length = 646 Score = 265 bits (676), Expect = 4e-69 Identities = 125/151 (82%), Positives = 139/151 (92%) Frame = -3 Query: 466 GAGYNINVPWENGRCGDVDYLAVWEHILIPVAKEYNPDLIIISAGFDAAINDPLGGCCLT 287 GAGYNINVPWENGRCGD DYLAVW+HILIPVAK++NPD++IISAGFDAAI DPLGGC +T Sbjct: 230 GAGYNINVPWENGRCGDADYLAVWDHILIPVAKDFNPDIVIISAGFDAAIGDPLGGCHVT 289 Query: 286 PYGYSVMLKKLMEFAGGRIVMALEGGYNLDSIANSVLACVEVLLEDKNIAESSEVYPFES 107 PYGYSVMLKKLMEF+ G+I+MALEGGYNL S+ANSVLACVEVLLEDK IA SSE YPFES Sbjct: 290 PYGYSVMLKKLMEFSEGKIIMALEGGYNLVSLANSVLACVEVLLEDKPIAGSSEAYPFES 349 Query: 106 TWRVIQVVREELSAYWPILATKLPEKLTSRK 14 TWRVIQ VR+ELSA+WP LA +LP+KLTS K Sbjct: 350 TWRVIQAVRQELSAFWPTLADELPKKLTSCK 380 >ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus communis] gi|223546264|gb|EEF47766.1| histone deacetylase hda1, putative [Ricinus communis] Length = 654 Score = 259 bits (661), Expect = 2e-67 Identities = 122/153 (79%), Positives = 136/153 (88%) Frame = -3 Query: 466 GAGYNINVPWENGRCGDVDYLAVWEHILIPVAKEYNPDLIIISAGFDAAINDPLGGCCLT 287 GAGYNINVPWENGRCGD DYLAVW+HILIPVAKE+NPD+IIISAGFDAA+ DPLGGC +T Sbjct: 233 GAGYNINVPWENGRCGDADYLAVWDHILIPVAKEFNPDMIIISAGFDAAVGDPLGGCRIT 292 Query: 286 PYGYSVMLKKLMEFAGGRIVMALEGGYNLDSIANSVLACVEVLLEDKNIAESSEVYPFES 107 PYGYSVMLKKLM+FA G+IV+ALEGGYNL+SIANS AC+EVLLE K IA SSE YPFES Sbjct: 293 PYGYSVMLKKLMDFANGKIVLALEGGYNLESIANSFFACMEVLLESKPIAGSSEAYPFES 352 Query: 106 TWRVIQVVREELSAYWPILATKLPEKLTSRKTP 8 TWRVIQ VR++LS YW LA +LP KLTS+K P Sbjct: 353 TWRVIQAVRKKLSGYWATLADELPLKLTSQKGP 385 >ref|XP_002305854.1| histone deacetylase [Populus trichocarpa] gi|222848818|gb|EEE86365.1| histone deacetylase [Populus trichocarpa] Length = 646 Score = 251 bits (640), Expect = 6e-65 Identities = 114/153 (74%), Positives = 135/153 (88%) Frame = -3 Query: 466 GAGYNINVPWENGRCGDVDYLAVWEHILIPVAKEYNPDLIIISAGFDAAINDPLGGCCLT 287 G GYNINVPWE+ RCGD DYLAVW+HILIPVAK+++PD+II+SAGFDAA+ DPLGGCC+T Sbjct: 226 GTGYNINVPWEHARCGDADYLAVWDHILIPVAKKFDPDMIIVSAGFDAAVGDPLGGCCVT 285 Query: 286 PYGYSVMLKKLMEFAGGRIVMALEGGYNLDSIANSVLACVEVLLEDKNIAESSEVYPFES 107 PYGYSVMLKKLM+FA G+I++ALEGGYNLDSIANS LAC++VLLEDK ++ S E YPFES Sbjct: 286 PYGYSVMLKKLMDFAQGKIMLALEGGYNLDSIANSFLACMKVLLEDKPVSGSVEAYPFES 345 Query: 106 TWRVIQVVREELSAYWPILATKLPEKLTSRKTP 8 TWRVIQ VR++LS YWP LA +LP KLT + P Sbjct: 346 TWRVIQAVRKKLSPYWPALADELPLKLTIQNAP 378 >ref|XP_004138195.1| PREDICTED: histone deacetylase 5-like [Cucumis sativus] Length = 659 Score = 250 bits (639), Expect = 7e-65 Identities = 109/153 (71%), Positives = 135/153 (88%) Frame = -3 Query: 466 GAGYNINVPWENGRCGDVDYLAVWEHILIPVAKEYNPDLIIISAGFDAAINDPLGGCCLT 287 GAGYNINVPWENGRCGD DYLAVW+HIL+PVA+EYNPD+I++SAGFDAA+ DPLGGCC+T Sbjct: 239 GAGYNINVPWENGRCGDADYLAVWDHILLPVAEEYNPDMIMVSAGFDAAVGDPLGGCCVT 298 Query: 286 PYGYSVMLKKLMEFAGGRIVMALEGGYNLDSIANSVLACVEVLLEDKNIAESSEVYPFES 107 PYGYS+MLKKLM A G+IV+ALEGGYNLDSIA+S+LAC E+LL+ + + + E YPFES Sbjct: 299 PYGYSIMLKKLMNLAQGKIVLALEGGYNLDSIASSMLACAELLLDGRTVNKPQETYPFES 358 Query: 106 TWRVIQVVREELSAYWPILATKLPEKLTSRKTP 8 TW+VIQ VR+ELS +WPIL+ ++P+ L S+K P Sbjct: 359 TWQVIQAVRQELSPFWPILSDEIPDNLISKKVP 391 >ref|NP_200914.2| histone deacetylase 5 [Arabidopsis thaliana] gi|75247631|sp|Q8RX28.1|HDA5_ARATH RecName: Full=Histone deacetylase 5 gi|20259320|gb|AAM13986.1| putative histone deacetylase [Arabidopsis thaliana] gi|21539579|gb|AAM53342.1| histone deacetylase-like protein [Arabidopsis thaliana] gi|23197730|gb|AAN15392.1| histone deacetylase-like protein [Arabidopsis thaliana] gi|332010034|gb|AED97417.1| histone deacetylase 5 [Arabidopsis thaliana] Length = 660 Score = 248 bits (633), Expect = 4e-64 Identities = 115/153 (75%), Positives = 130/153 (84%) Frame = -3 Query: 466 GAGYNINVPWENGRCGDVDYLAVWEHILIPVAKEYNPDLIIISAGFDAAINDPLGGCCLT 287 G G+NINVPW+ GRCGD DYLA W+HILIPVA+E+NPD+I +SAGFDAAINDPLGGCC+T Sbjct: 245 GEGFNINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVT 304 Query: 286 PYGYSVMLKKLMEFAGGRIVMALEGGYNLDSIANSVLACVEVLLEDKNIAESSEVYPFES 107 PYGYSVMLKKLMEFA G+IV+ALEGGYNLDSIA S LACV+VLLEDK I E YPFES Sbjct: 305 PYGYSVMLKKLMEFAQGKIVLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEAYPFES 364 Query: 106 TWRVIQVVREELSAYWPILATKLPEKLTSRKTP 8 TWRVIQ VR+ L YWP LA +L KL ++KTP Sbjct: 365 TWRVIQAVRKRLCTYWPSLADELSWKLINQKTP 397