BLASTX nr result

ID: Panax21_contig00032151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032151
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320889.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002302659.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
emb|CBI38687.3| unnamed protein product [Vitis vinifera]              117   1e-24
gb|ADH04264.1| HB1 [Nicotiana benthamiana]                            110   1e-22
gb|ADI50265.2| homeodomain 20 transcription factor [Nicotiana at...   107   8e-22

>ref|XP_002320889.1| predicted protein [Populus trichocarpa] gi|222861662|gb|EEE99204.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  124 bits (311), Expect = 8e-27
 Identities = 64/123 (52%), Positives = 89/123 (72%), Gaps = 11/123 (8%)
 Frame = -2

Query: 515 QLQRLHDMMENSAEQ-------VARNSTDGKSDK----KSEFEMKAGLSLDRSAEPGFGV 369
           QLQ+L+D+M+   E+        A NS++G+S+     K E E K  LS+++  E G GV
Sbjct: 119 QLQKLNDLMKKPVEEGECCGQGAAVNSSEGESENGDATKGESETKPRLSIEQP-EHGLGV 177

Query: 368 LSDDDSSIKAEYFGLDDEPDLLNMVEVEPGDGSLTSTEDWGTLESDGLLDQSTSSYQWWD 189
           LSD+DSSIK +YF L++EP+L++MVE  P +GSLTS EDWG+++SDGL DQS+S YQWWD
Sbjct: 178 LSDEDSSIKVDYFELEEEPNLMSMVE--PAEGSLTSQEDWGSIDSDGLFDQSSSGYQWWD 235

Query: 188 FWS 180
           FW+
Sbjct: 236 FWA 238


>ref|XP_002302659.1| predicted protein [Populus trichocarpa] gi|222844385|gb|EEE81932.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  122 bits (307), Expect = 2e-26
 Identities = 66/123 (53%), Positives = 86/123 (69%), Gaps = 11/123 (8%)
 Frame = -2

Query: 515 QLQRLHDMMENSAEQ-------VARNSTDGKSDKKS----EFEMKAGLSLDRSAEPGFGV 369
           QLQ+++D+M+   E+        A NS +GKS+       E E    LS++R  E G GV
Sbjct: 119 QLQKINDLMKKPGEEGECCGQGPAVNSIEGKSENADTTMGESETNPRLSIERP-EHGLGV 177

Query: 368 LSDDDSSIKAEYFGLDDEPDLLNMVEVEPGDGSLTSTEDWGTLESDGLLDQSTSSYQWWD 189
           LSD+DSSIKAEYF L++EP+L++MVE  P DGSLTS EDWG+L+SD L DQS+S YQWWD
Sbjct: 178 LSDEDSSIKAEYFELEEEPNLISMVE--PADGSLTSQEDWGSLDSDRLFDQSSSDYQWWD 235

Query: 188 FWS 180
           FW+
Sbjct: 236 FWA 238


>emb|CBI38687.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score =  117 bits (292), Expect = 1e-24
 Identities = 61/122 (50%), Positives = 86/122 (70%), Gaps = 11/122 (9%)
 Frame = -2

Query: 515 QLQRLHDMMENSA-------EQVARNSTDGKSDKKS----EFEMKAGLSLDRSAEPGFGV 369
           QLQ+L++M++ S        +++ +NS + ++D +     E E+K  LSL+RS E G GV
Sbjct: 74  QLQKLNEMVQQSGGAKQDSEQRLVQNSAESEADNRDNGNCESEVKPNLSLERS-EHGGGV 132

Query: 368 LSDDDSSIKAEYFGLDDEPDLLNMVEVEPGDGSLTSTEDWGTLESDGLLDQSTSSYQWWD 189
           LSDDDSSI+A+YF +++EP LL MVE  P DG LTS EDWG+ +S+ + DQS+ SYQWWD
Sbjct: 133 LSDDDSSIRADYFVMEEEPSLLTMVE--PVDGCLTSPEDWGSWDSENVFDQSSGSYQWWD 190

Query: 188 FW 183
           FW
Sbjct: 191 FW 192


>gb|ADH04264.1| HB1 [Nicotiana benthamiana]
          Length = 253

 Score =  110 bits (275), Expect = 1e-22
 Identities = 65/126 (51%), Positives = 79/126 (62%), Gaps = 14/126 (11%)
 Frame = -2

Query: 515 QLQRLHDMMENSAEQVARNSTDG----------KSDKKSEFEMKAGLSLDRSAEPGFGVL 366
           QLQ+L+D+M+ S ++  +  + G           + K  E E K  LS D S     GV+
Sbjct: 130 QLQKLNDLMQKSEKEEGQYCSIGFDQESYNREDNTIKNKEMEGKPSLSFDLSEHGVNGVI 189

Query: 365 SDDDSSIKAEYFGLDDEPD-LLNMVEVEPGDGSLTSTEDWGTLESDGLLDQSTSSY---Q 198
           SDDDSSIKA+YFGLD+E D LL MVE   GD SLTS E+WGTLE DGLLDQ  +S    Q
Sbjct: 190 SDDDSSIKADYFGLDEESDHLLKMVEA--GDSSLTSPENWGTLEDDGLLDQQPNSCNYDQ 247

Query: 197 WWDFWS 180
           WWDFWS
Sbjct: 248 WWDFWS 253


>gb|ADI50265.2| homeodomain 20 transcription factor [Nicotiana attenuata]
          Length = 253

 Score =  107 bits (268), Expect = 8e-22
 Identities = 63/126 (50%), Positives = 78/126 (61%), Gaps = 14/126 (11%)
 Frame = -2

Query: 515 QLQRLHDMMENSAEQVARNST----------DGKSDKKSEFEMKAGLSLDRSAEPGFGVL 366
           QLQ+L+D+M+ S ++  +  +          D  + K  E E K  LS D S     GV+
Sbjct: 130 QLQKLNDLMQKSEKEGGQYCSIGFDQESYNRDNNTIKNKEMEGKPSLSFDLSEHGVNGVI 189

Query: 365 SDDDSSIKAEYFGLDDEPD-LLNMVEVEPGDGSLTSTEDWGTLESDGLLDQSTSSY---Q 198
           SDDDSSIKA+YFGLD+E D LL MVE   GD SLTS E+WGTLE DGLL+Q  +     Q
Sbjct: 190 SDDDSSIKADYFGLDEESDHLLKMVEA--GDSSLTSPENWGTLEDDGLLNQQPNGCNYDQ 247

Query: 197 WWDFWS 180
           WWDFWS
Sbjct: 248 WWDFWS 253


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