BLASTX nr result

ID: Panax21_contig00032144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032144
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   169   3e-40
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]   164   7e-39
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]   164   9e-39
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   161   5e-38
emb|CBI37296.3| unnamed protein product [Vitis vinifera]              160   8e-38

>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  169 bits (427), Expect = 3e-40
 Identities = 84/114 (73%), Positives = 98/114 (85%)
 Frame = -3

Query: 426 KFQGNARV*RAQLQALCKDFEILYMKEGEIVSDYFARTLTIANKMRFHGETVTDVTVIEK 247
           K+QG ARV  AQLQAL K+FE+L+MK GE V+DYF RTL IANKMR HGE + DV +IEK
Sbjct: 102 KYQGTARVKHAQLQALRKEFEVLHMKTGESVNDYFGRTLIIANKMRTHGERMVDVVIIEK 161

Query: 246 ILRSMISKFDYVVCSIEESKDLDTMSLDELQSSLLVHEQRMQGHVVEEQALKIT 85
           ILRSM SK+DYVVCSIEES DLDT+S+DELQSSLLVHEQR+  HVV+EQAL++T
Sbjct: 162 ILRSMTSKYDYVVCSIEESNDLDTLSIDELQSSLLVHEQRISRHVVDEQALQVT 215


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score =  164 bits (415), Expect = 7e-39
 Identities = 83/115 (72%), Positives = 96/115 (83%)
 Frame = -3

Query: 426 KFQGNARV*RAQLQALCKDFEILYMKEGEIVSDYFARTLTIANKMRFHGETVTDVTVIEK 247
           K+QG  RV RA LQAL K+FE+L+MK GE V++YFARTLTIANKM+ +GE   DV V+EK
Sbjct: 101 KYQGTTRVKRAHLQALRKEFELLHMKAGESVNEYFARTLTIANKMKANGENKGDVVVVEK 160

Query: 246 ILRSMISKFDYVVCSIEESKDLDTMSLDELQSSLLVHEQRMQGHVVEEQALKITH 82
           ILRSM  KFDYVVCSIEESKD +T+++DELQSSLLVHEQRM  HV EE ALKITH
Sbjct: 161 ILRSMTPKFDYVVCSIEESKDTNTLTIDELQSSLLVHEQRMSSHVEEEHALKITH 215


>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
          Length = 1338

 Score =  164 bits (414), Expect = 9e-39
 Identities = 84/117 (71%), Positives = 99/117 (84%)
 Frame = -3

Query: 426 KFQGNARV*RAQLQALCKDFEILYMKEGEIVSDYFARTLTIANKMRFHGETVTDVTVIEK 247
           K+QG ARV RAQ QAL K+FE+L MK GE V++YFARTLTIANKMR HG+ + DV VIEK
Sbjct: 165 KYQGTARVQRAQRQALRKEFEMLNMKVGESVNEYFARTLTIANKMRVHGQKMEDVVVIEK 224

Query: 246 ILRSMISKFDYVVCSIEESKDLDTMSLDELQSSLLVHEQRMQGHVVEEQALKITHDN 76
           ILRSM  KF+ VVCSIEES DLDT+S+D LQSSLLVHEQRM  H+VEEQALK+T+++
Sbjct: 225 ILRSMTPKFNCVVCSIEESNDLDTLSIDVLQSSLLVHEQRMNDHLVEEQALKVTYED 281


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  161 bits (408), Expect = 5e-38
 Identities = 79/119 (66%), Positives = 100/119 (84%), Gaps = 1/119 (0%)
 Frame = -3

Query: 426 KFQGNARV*RAQLQALCKDFEILYMKEGEIVSDYFARTLTIANKMRFHGETVTDVTVIEK 247
           KFQG+ +V RAQLQ L ++FE+L M+EGE V++YFARTLT+ANKM+ HGE + D+ ++EK
Sbjct: 75  KFQGSTKVKRAQLQTLRREFEVLGMREGEKVNEYFARTLTVANKMKAHGERMEDLVIVEK 134

Query: 246 ILRSMISKFDYVVCSIEESKDLDTMSLDELQSSLLVHEQRMQGH-VVEEQALKITHDNS 73
           ILRSM  K+DYVVCSIEES DL TM++DELQSSLLVHEQRM  H V +EQ LK+TH+N+
Sbjct: 135 ILRSMTRKYDYVVCSIEESNDLTTMTIDELQSSLLVHEQRMHAHDVGDEQVLKVTHENT 193


>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
          Length = 3048

 Score =  160 bits (406), Expect = 8e-38
 Identities = 82/116 (70%), Positives = 97/116 (83%), Gaps = 1/116 (0%)
 Frame = -3

Query: 426 KFQGNARV*RAQLQALCKDFEILYMKEGEIVSDYFARTLTIANKMRFHGETVTDVTVIEK 247
           KFQG  RV R  LQAL K+F+IL+MK GE V++YF+RTL IANKM+ +GE   +  V+EK
Sbjct: 126 KFQGTTRVKRGNLQALRKEFKILHMKSGETVNEYFSRTLAIANKMKVNGEDKGNTAVVEK 185

Query: 246 ILRSMISKFDYVVCSIEESKDLDTMSLDELQSSLLVHEQRMQGHVV-EEQALKITH 82
           ILRSM SKFDYVVCSIEESKDLDT+++DELQSSLLVHEQRM  HV+ EEQALK+TH
Sbjct: 186 ILRSMTSKFDYVVCSIEESKDLDTLTIDELQSSLLVHEQRMTSHVLEEEQALKVTH 241


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