BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032141
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ...   130   8e-29
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ...   130   8e-29
ref|XP_002873691.1| pentatricopeptide repeat-containing protein ...   118   6e-25
sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-c...   111   7e-23
ref|NP_196981.1| pentatricopeptide repeat-containing protein [Ar...   111   7e-23

>ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503561|gb|AES84764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  130 bits (328), Expect = 8e-29
 Identities = 68/124 (54%), Positives = 89/124 (71%)
 Frame = -2

Query: 373 LYASFFCTLIQLFLSCRRLSKAIEAFTAMRNHGMVPELCSWNCLLREFNASGLVSQVWVV 194
           LY SFFCTLI+L+L+  R S A   F+ MR  G+VP L  WN LL +FNASGLVSQV ++
Sbjct: 57  LYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLM 116

Query: 193 YTEMLSCGIVPNFVTHNVVIHSLCKTGRIDLALYLLRDDDNNGSGADTVSYNTVL*GFCR 14
           Y++ML CG+VP+  + NV++HSLCK G +DLAL  LR  +N+    D V+YNTV+ GFC+
Sbjct: 117 YSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLR--NNDVVDIDNVTYNTVIWGFCQ 174

Query: 13  VGFV 2
            G V
Sbjct: 175 KGLV 178


>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503316|gb|AES84519.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  130 bits (328), Expect = 8e-29
 Identities = 68/124 (54%), Positives = 89/124 (71%)
 Frame = -2

Query: 373 LYASFFCTLIQLFLSCRRLSKAIEAFTAMRNHGMVPELCSWNCLLREFNASGLVSQVWVV 194
           LY SFFCTLI+L+L+  R S A   F+ MR  G+VP L  WN LL +FNASGLVSQV ++
Sbjct: 57  LYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLM 116

Query: 193 YTEMLSCGIVPNFVTHNVVIHSLCKTGRIDLALYLLRDDDNNGSGADTVSYNTVL*GFCR 14
           Y++ML CG+VP+  + NV++HSLCK G +DLAL  LR  +N+    D V+YNTV+ GFC+
Sbjct: 117 YSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLR--NNDVVDIDNVTYNTVIWGFCQ 174

Query: 13  VGFV 2
            G V
Sbjct: 175 KGLV 178


>ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319528|gb|EFH49950.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 938

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/124 (48%), Positives = 82/124 (66%), Gaps = 1/124 (0%)
 Frame = -2

Query: 376 RLYASFFCTLIQLFLSCRRLSKAIEAFTAMRNHGMVPELCSWNCLLREFNASGLV-SQVW 200
           R+Y S F TL +L+LSC RL  A    +AM   G+VP+LC WN L+ +FN +GLV  QV 
Sbjct: 55  RVYVSLFHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVS 114

Query: 199 VVYTEMLSCGIVPNFVTHNVVIHSLCKTGRIDLALYLLRDDDNNGSGADTVSYNTVL*GF 20
           +VY++M++CG+ P+    NV+IHSLCK G++  A+ LLR   N     DTV+YNTV+ G 
Sbjct: 115 LVYSKMIACGVSPDVFALNVLIHSLCKVGQLSFAISLLR---NRVISVDTVTYNTVISGL 171

Query: 19  CRVG 8
           C  G
Sbjct: 172 CEHG 175



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/127 (26%), Positives = 57/127 (44%)
 Frame = -2

Query: 388  KLYNRLYASFFCTLIQLFLSCRRLSKAIEAFTAMRNHGMVPELCSWNCLLREFNASGLVS 209
            KL  ++Y +   TL +L ++     KA      M   G VP+  ++N L+  +     V 
Sbjct: 675  KLSRQVYNTLIATLCKLGMT----RKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVG 730

Query: 208  QVWVVYTEMLSCGIVPNFVTHNVVIHSLCKTGRIDLALYLLRDDDNNGSGADTVSYNTVL 29
            +    Y+ M+  GI PN  T+N +I  L   G I      L +  + G   D  +YN ++
Sbjct: 731  KALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALI 790

Query: 28   *GFCRVG 8
             G  ++G
Sbjct: 791  SGQAKIG 797


>sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/124 (45%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
 Frame = -2

Query: 376 RLYASFFCTLIQLFLSCRRLSKAIEAFTAMRNHGMVPELCSWNCLLREFNASGLV-SQVW 200
           R+Y S F TL +L+LSC RL  A    +AM   G+VP+   WN L+ +FN +GLV  QV 
Sbjct: 57  RVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVS 116

Query: 199 VVYTEMLSCGIVPNFVTHNVVIHSLCKTGRIDLALYLLRDDDNNGSGADTVSYNTVL*GF 20
           ++Y++M++CG+ P+    NV+IHS CK GR+  A+ LLR   N     DTV+YNTV+ G 
Sbjct: 117 LIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVTYNTVISGL 173

Query: 19  CRVG 8
           C  G
Sbjct: 174 CEHG 177


>ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis
           thaliana] gi|332004692|gb|AED92075.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/124 (45%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
 Frame = -2

Query: 376 RLYASFFCTLIQLFLSCRRLSKAIEAFTAMRNHGMVPELCSWNCLLREFNASGLV-SQVW 200
           R+Y S F TL +L+LSC RL  A    +AM   G+VP+   WN L+ +FN +GLV  QV 
Sbjct: 55  RVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVS 114

Query: 199 VVYTEMLSCGIVPNFVTHNVVIHSLCKTGRIDLALYLLRDDDNNGSGADTVSYNTVL*GF 20
           ++Y++M++CG+ P+    NV+IHS CK GR+  A+ LLR   N     DTV+YNTV+ G 
Sbjct: 115 LIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVTYNTVISGL 171

Query: 19  CRVG 8
           C  G
Sbjct: 172 CEHG 175