BLASTX nr result

ID: Panax21_contig00032113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032113
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95319.1| retrotransposon protein, putative, unclassified [...    67   2e-09
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]    65   8e-09
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]         62   4e-08
ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]         62   6e-08

>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/78 (43%), Positives = 44/78 (56%)
 Frame = -1

Query: 422  SLLKKKINSKYTTSAVLPQLDDHG*FLVEPVAILD*KMIKKNNAASVEVLVQWSNTLPDE 243
            S LKK + +       LP +   G    EPVA+L  +MI +NN A  + L+ WSN  P E
Sbjct: 878  SQLKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAE 937

Query: 242  ATWEDWNEFHKKFPHFQP 189
            ATWED +   K FP+FQP
Sbjct: 938  ATWEDASYIQKVFPNFQP 955


>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
          Length = 647

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/74 (43%), Positives = 41/74 (55%)
 Frame = -1

Query: 422 SLLKKKINSKYTTSAVLPQLDDHG*FLVEPVAILD*KMIKKNNAASVEVLVQWSNTLPDE 243
           SLLKK I         LP L D G F++EP  I+D +  KK      E LV+W N L ++
Sbjct: 541 SLLKKTIGDSNACCPTLPPLTDDGAFIIEPTEIIDTRWFKKGGNFFEECLVKWKNLLVED 600

Query: 242 ATWEDWNEFHKKFP 201
           ATWE+  E H +FP
Sbjct: 601 ATWENAAELHDRFP 614


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/78 (43%), Positives = 43/78 (55%)
 Frame = -1

Query: 422  SLLKKKINSKYTTSAVLPQLDDHG*FLVEPVAILD*KMIKKNNAASVEVLVQWSNTLPDE 243
            S LKK I  K      LP  DD+G  L +P A+L+ ++I +NNA  V+  VQW+N     
Sbjct: 1234 SQLKKHIGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWKVQWANLPLSA 1293

Query: 242  ATWEDWNEFHKKFPHFQP 189
            ATWED     K FP F P
Sbjct: 1294 ATWEDAAFISKVFPAFNP 1311


>ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|222839253|gb|EEE77604.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/56 (50%), Positives = 39/56 (69%)
 Frame = -1

Query: 362 DDHG*FLVEPVAILD*KMIKKNNAASVEVLVQWSNTLPDEATWEDWNEFHKKFPHF 195
           ++ G   V PVAIL+ K+IKK+N A V  L+QWSN+ P++ATWE+  E   +FP F
Sbjct: 270 EEEGRVKVYPVAILERKLIKKDNRAVVAGLIQWSNSFPEDATWEELTEIQLQFPEF 325


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/78 (42%), Positives = 40/78 (51%)
 Frame = -1

Query: 422  SLLKKKINSKYTTSAVLPQLDDHG*FLVEPVAILD*KMIKKNNAASVEVLVQWSNTLPDE 243
            S LKK I S+    A LP +   G    EPVA+L  +MI +   A  + LV W N  P E
Sbjct: 1509 SQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSE 1568

Query: 242  ATWEDWNEFHKKFPHFQP 189
            ATWED +     FP F P
Sbjct: 1569 ATWEDASMIQSMFPSFNP 1586


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