BLASTX nr result

ID: Panax21_contig00032106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032106
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30028.3| unnamed protein product [Vitis vinifera]              216   4e-54
ref|XP_002279026.1| PREDICTED: non-structural maintenance of chr...   216   4e-54
emb|CBI16452.3| unnamed protein product [Vitis vinifera]              211   1e-52
ref|XP_002304893.1| predicted protein [Populus trichocarpa] gi|2...   196   6e-48
ref|XP_002529957.1| Non-structural maintenance of chromosome ele...   194   2e-47

>emb|CBI30028.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  216 bits (550), Expect = 4e-54
 Identities = 125/237 (52%), Positives = 153/237 (64%), Gaps = 3/237 (1%)
 Frame = -3

Query: 703 KEEEMSSTNPNRAELGELNQ--QETEERRVLRSGYIKIQNLISENRDDIAGVDSNKFDSI 530
           K E  SS+  N  E G  N   Q   ERRVLRS Y+ ++N I + R+DI  VDS+KF SI
Sbjct: 78  KREVGSSSRANANEAGADNSGHQGVTERRVLRSRYLAVKNQICDGREDITKVDSDKFKSI 137

Query: 529 IKEVEDLHLQVKKPREQVADAEAXXXXXXXXXXXXXXXXSGGVTPSEFVSCLLKHFGQH- 353
           I EVE LH QV+KPREQVADAEA                + G+TPS+FVSCLL+ FGQ+ 
Sbjct: 138 INEVESLHQQVQKPREQVADAEALLDITNTLVTSVKAHGNEGITPSDFVSCLLQEFGQNP 197

Query: 352 GRRGTSESSQNSVLWRDIGLSVSPIFKNANGCSTMLGPMKNELKQRKVVVRRQYAKPNCR 173
           G   ++E + NS++W+DIGL VS IFK A+GC TMLGPM  E+KQRK VV  +  +P   
Sbjct: 198 GVSTSAEDAGNSIVWKDIGLVVSHIFKRASGCCTMLGPMNTEMKQRKPVVHNKRVRPT-E 256

Query: 172 SARPXXXXXXXXXXXXXXDKNMLTIFEILRKKKSVKLENLLLNRKSFAQTVENLFAL 2
           SARP              DKNM  +F+ILRK + V+LENL+LNR SFAQTVENLFAL
Sbjct: 257 SARPEELDDTVVEEKSDTDKNMSIMFDILRKNRRVRLENLILNRNSFAQTVENLFAL 313


>ref|XP_002279026.1| PREDICTED: non-structural maintenance of chromosome element 4
           [Vitis vinifera]
          Length = 380

 Score =  216 bits (550), Expect = 4e-54
 Identities = 125/237 (52%), Positives = 153/237 (64%), Gaps = 3/237 (1%)
 Frame = -3

Query: 703 KEEEMSSTNPNRAELGELNQ--QETEERRVLRSGYIKIQNLISENRDDIAGVDSNKFDSI 530
           K E  SS+  N  E G  N   Q   ERRVLRS Y+ ++N I + R+DI  VDS+KF SI
Sbjct: 6   KREVGSSSRANANEAGADNSGHQGVTERRVLRSRYLAVKNQICDGREDITKVDSDKFKSI 65

Query: 529 IKEVEDLHLQVKKPREQVADAEAXXXXXXXXXXXXXXXXSGGVTPSEFVSCLLKHFGQH- 353
           I EVE LH QV+KPREQVADAEA                + G+TPS+FVSCLL+ FGQ+ 
Sbjct: 66  INEVESLHQQVQKPREQVADAEALLDITNTLVTSVKAHGNEGITPSDFVSCLLQEFGQNP 125

Query: 352 GRRGTSESSQNSVLWRDIGLSVSPIFKNANGCSTMLGPMKNELKQRKVVVRRQYAKPNCR 173
           G   ++E + NS++W+DIGL VS IFK A+GC TMLGPM  E+KQRK VV  +  +P   
Sbjct: 126 GVSTSAEDAGNSIVWKDIGLVVSHIFKRASGCCTMLGPMNTEMKQRKPVVHNKRVRPT-E 184

Query: 172 SARPXXXXXXXXXXXXXXDKNMLTIFEILRKKKSVKLENLLLNRKSFAQTVENLFAL 2
           SARP              DKNM  +F+ILRK + V+LENL+LNR SFAQTVENLFAL
Sbjct: 185 SARPEELDDTVVEEKSDTDKNMSIMFDILRKNRRVRLENLILNRNSFAQTVENLFAL 241


>emb|CBI16452.3| unnamed protein product [Vitis vinifera]
          Length = 406

 Score =  211 bits (538), Expect = 1e-52
 Identities = 115/216 (53%), Positives = 145/216 (67%)
 Frame = -3

Query: 649 NQQETEERRVLRSGYIKIQNLISENRDDIAGVDSNKFDSIIKEVEDLHLQVKKPREQVAD 470
           +QQ T +RRVLRS Y+ ++NLIS+ RDDI+ V S+KF SII EVE+LH  V+KPREQVAD
Sbjct: 29  SQQGTADRRVLRSRYLAVKNLISDKRDDISRVGSDKFKSIISEVENLHQFVQKPREQVAD 88

Query: 469 AEAXXXXXXXXXXXXXXXXSGGVTPSEFVSCLLKHFGQHGRRGTSESSQNSVLWRDIGLS 290
           AEA                + GVTPS+ V+C L  +GQHG   T+E+ +  + W+ IG+ 
Sbjct: 89  AEALLDIANTLVTSVKSQTNAGVTPSDLVTCFLSKYGQHGGGFTTENPR--IHWKKIGIV 146

Query: 289 VSPIFKNANGCSTMLGPMKNELKQRKVVVRRQYAKPNCRSARPXXXXXXXXXXXXXXDKN 110
           VSPIF+   GC TMLGPM  ELKQRKV V ++ ++    S RP              DKN
Sbjct: 147 VSPIFRKGQGCCTMLGPMNTELKQRKVAVHQKRSRQPTESTRPEELNNYGEEHRSDTDKN 206

Query: 109 MLTIFEILRKKKSVKLENLLLNRKSFAQTVENLFAL 2
           M T+FEILR+KK VKLE+L+LNRKSFA+TVENLFAL
Sbjct: 207 MATMFEILRRKKQVKLESLMLNRKSFARTVENLFAL 242


>ref|XP_002304893.1| predicted protein [Populus trichocarpa] gi|222842325|gb|EEE79872.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  196 bits (497), Expect = 6e-48
 Identities = 111/235 (47%), Positives = 145/235 (61%), Gaps = 1/235 (0%)
 Frame = -3

Query: 703 KEEEMSSTNPNRAELGELNQQETEERRVLRSGYIKIQNLISENRDDIAGVDSNKFDSIIK 524
           +E +      +R + G     +  +RRVLRS Y  +QN I + RDD+   D ++F+++IK
Sbjct: 25  REMKRERVTRSRGKSGVEEPNQQMDRRVLRSMYRTLQNRIKDKRDDLTRHDLDRFNTMIK 84

Query: 523 EVEDLHLQVKKPREQVADAEAXXXXXXXXXXXXXXXXSGGVTPSEFVSCLLKHFGQHGRR 344
           EVEDLH  V+KPREQVADAEA                + G+TP++FVS L+K FGQ  R 
Sbjct: 85  EVEDLHKFVQKPREQVADAEALLGLANTLVSSVKSQSNEGITPADFVSHLIKEFGQQTRS 144

Query: 343 -GTSESSQNSVLWRDIGLSVSPIFKNANGCSTMLGPMKNELKQRKVVVRRQYAKPNCRSA 167
               E +  S+ W+D+GL VSPIF+   G STMLGPM  ELKQRK  V R+  +P    A
Sbjct: 145 LDNDEDAPVSIKWKDLGLLVSPIFRRCTGVSTMLGPMNTELKQRKAAVHRKRTRP-AEKA 203

Query: 166 RPXXXXXXXXXXXXXXDKNMLTIFEILRKKKSVKLENLLLNRKSFAQTVENLFAL 2
           RP              DKNM  IF+IL++KKSV+LENL+LNR+SFA+TVENLFAL
Sbjct: 204 RPEEVDDAGGEKKTDTDKNMKIIFDILKEKKSVRLENLILNRRSFAETVENLFAL 258


>ref|XP_002529957.1| Non-structural maintenance of chromosome element, putative [Ricinus
           communis] gi|223530555|gb|EEF32434.1| Non-structural
           maintenance of chromosome element, putative [Ricinus
           communis]
          Length = 391

 Score =  194 bits (492), Expect = 2e-47
 Identities = 114/241 (47%), Positives = 143/241 (59%), Gaps = 4/241 (1%)
 Frame = -3

Query: 712 LSKKEEEMSSTNPNRAELGELNQQETEERRVLRSGYIKIQNLISENRDDIAGVDSNKFDS 533
           LS+   E S+  P++ +          +RRVLRS Y+ + N I+  RDD+A VDS+KF +
Sbjct: 28  LSRNRVESSTQQPHQDD-------SVVDRRVLRSKYLALYNKINVERDDLAQVDSDKFAT 80

Query: 532 IIKEVEDLHLQVKKPREQVADAEAXXXXXXXXXXXXXXXXSGGVTPSEFVSCLLKHFGQH 353
           IIKEVEDLH  V++PREQVADAEA                + G T S+FVS LL  FGQ 
Sbjct: 81  IIKEVEDLHQHVQRPREQVADAEALLGIASTLVTSVKSQSNEGSTASDFVSGLLAAFGQS 140

Query: 352 ----GRRGTSESSQNSVLWRDIGLSVSPIFKNANGCSTMLGPMKNELKQRKVVVRRQYAK 185
               G  G  ++S   + W+DIGL VSPIFK  NG STM+GPM  ELKQRK  V R   +
Sbjct: 141 NRTLGNEGIDDNSPTFINWKDIGLVVSPIFKKCNGFSTMVGPMNTELKQRKAAVNRSRRE 200

Query: 184 PNCRSARPXXXXXXXXXXXXXXDKNMLTIFEILRKKKSVKLENLLLNRKSFAQTVENLFA 5
                ++P              D NM T+FEILR+ K  +LENL+LNR+SFAQTVENLFA
Sbjct: 201 KPTEKSQPEEVDDSEAEKKTDTDNNMSTMFEILRRNKRARLENLILNRRSFAQTVENLFA 260

Query: 4   L 2
           L
Sbjct: 261 L 261


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