BLASTX nr result

ID: Panax21_contig00032080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032080
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270554.1| PREDICTED: zinc finger protein 511 [Vitis vi...   171   6e-41
ref|XP_002300111.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_004138793.1| PREDICTED: zinc finger protein 511-like [Cuc...   159   3e-37
ref|XP_002509504.1| zinc finger protein, putative [Ricinus commu...   150   9e-35
ref|NP_001242284.1| uncharacterized protein LOC100819557 [Glycin...   137   1e-30

>ref|XP_002270554.1| PREDICTED: zinc finger protein 511 [Vitis vinifera]
           gi|147815339|emb|CAN67772.1| hypothetical protein
           VITISV_010523 [Vitis vinifera]
           gi|296082337|emb|CBI21342.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score =  171 bits (433), Expect = 6e-41
 Identities = 88/131 (67%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
 Frame = -1

Query: 535 KVARGFPMYECLVEGCVIKLKSYKARQQHLVDKHKFPTSFEFFKKTHXXXXXXXXXXXXQ 356
           KVARG+ MYECLVEGC +KLKSYK+RQQHLVDKHKFPTSFEFFKK              Q
Sbjct: 123 KVARGYAMYECLVEGCGMKLKSYKSRQQHLVDKHKFPTSFEFFKKGQPSKKRRQKLQRKQ 182

Query: 355 A-HKTEEASSAMQVDEETMSGLISAVSKLNTSDSCPSSISLGRRNTRGLAFVPRSVQHD* 179
           A HK EEASS M+++EET+SGL+SAVSKL+TSDS PSS+S GR +TRG  FVPR+VQ++ 
Sbjct: 183 AVHKREEASSTMEIEEETISGLVSAVSKLSTSDSTPSSVSFGRHHTRGFTFVPRAVQNEK 242

Query: 178 KPDSAPAGTKR 146
           +PDS  A TKR
Sbjct: 243 RPDSTQAITKR 253


>ref|XP_002300111.1| predicted protein [Populus trichocarpa] gi|222847369|gb|EEE84916.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  160 bits (405), Expect = 1e-37
 Identities = 81/124 (65%), Positives = 95/124 (76%), Gaps = 1/124 (0%)
 Frame = -1

Query: 535 KVARGFPMYECLVEGCVIKLKSYKARQQHLVDKHKFPTSFEFFKKTHXXXXXXXXXXXXQ 356
           KVARG+ MYECLVEGC +K K+YK RQQHLVDKHKFP+SFEFFKK H            Q
Sbjct: 127 KVARGYAMYECLVEGCGLKFKNYKGRQQHLVDKHKFPSSFEFFKKAHLSKKARQKQHRKQ 186

Query: 355 A-HKTEEASSAMQVDEETMSGLISAVSKLNTSDSCPSSISLGRRNTRGLAFVPRSVQHD* 179
           A H++EE SS M ++ ET+ GL+SAVSKL+TSDS PSSIS GRRNTRGL FVPR+VQ + 
Sbjct: 187 AIHRSEETSSKMDIEGETIDGLVSAVSKLSTSDSSPSSISFGRRNTRGLTFVPRAVQREK 246

Query: 178 KPDS 167
           + DS
Sbjct: 247 RADS 250


>ref|XP_004138793.1| PREDICTED: zinc finger protein 511-like [Cucumis sativus]
           gi|449518803|ref|XP_004166425.1| PREDICTED: zinc finger
           protein 511-like [Cucumis sativus]
          Length = 249

 Score =  159 bits (401), Expect = 3e-37
 Identities = 82/130 (63%), Positives = 94/130 (72%)
 Frame = -1

Query: 535 KVARGFPMYECLVEGCVIKLKSYKARQQHLVDKHKFPTSFEFFKKTHXXXXXXXXXXXXQ 356
           KVARG+ MYECLVEGC +K KSYK+R QHLVDKHKF  SFEFFKK H            Q
Sbjct: 120 KVARGYDMYECLVEGCGLKFKSYKSRHQHLVDKHKFSASFEFFKKAHPSKKQRQKTYRKQ 179

Query: 355 AHKTEEASSAMQVDEETMSGLISAVSKLNTSDSCPSSISLGRRNTRGLAFVPRSVQHD*K 176
           A +  E +S M+V+ E M GLIS VSKL+TSDS PSSIS GRR+TRGL FVPR+VQ +  
Sbjct: 180 ASQGREETSKMEVENEIMDGLISGVSKLSTSDSTPSSISFGRRHTRGLTFVPRAVQREKV 239

Query: 175 PDSAPAGTKR 146
            DS+ AGTKR
Sbjct: 240 SDSSTAGTKR 249


>ref|XP_002509504.1| zinc finger protein, putative [Ricinus communis]
           gi|223549403|gb|EEF50891.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 253

 Score =  150 bits (380), Expect = 9e-35
 Identities = 77/130 (59%), Positives = 95/130 (73%)
 Frame = -1

Query: 535 KVARGFPMYECLVEGCVIKLKSYKARQQHLVDKHKFPTSFEFFKKTHXXXXXXXXXXXXQ 356
           KV RG+PMYECLVEGC +KL +YK+RQQHLVDKHKFP++FEFFKK H            +
Sbjct: 127 KVERGYPMYECLVEGCGLKLINYKSRQQHLVDKHKFPSAFEFFKKAHPSKKARQKHKHQR 186

Query: 355 AHKTEEASSAMQVDEETMSGLISAVSKLNTSDSCPSSISLGRRNTRGLAFVPRSVQHD*K 176
               EEA S M+V+ ET+ GL+SAVS+L+TSDS PSSIS GRR+ RGL FVPR+VQ   +
Sbjct: 187 VIPKEEAPSKMEVEGETIDGLVSAVSRLSTSDSSPSSISFGRRHNRGLTFVPRAVQ---Q 243

Query: 175 PDSAPAGTKR 146
            +S   GT+R
Sbjct: 244 GNSKQTGTRR 253


>ref|NP_001242284.1| uncharacterized protein LOC100819557 [Glycine max]
           gi|255638737|gb|ACU19673.1| unknown [Glycine max]
          Length = 254

 Score =  137 bits (345), Expect = 1e-30
 Identities = 74/130 (56%), Positives = 91/130 (70%)
 Frame = -1

Query: 535 KVARGFPMYECLVEGCVIKLKSYKARQQHLVDKHKFPTSFEFFKKTHXXXXXXXXXXXXQ 356
           KVARG+ MYECLVE C +K KSY +RQ+HLVDKHKFPTSFEFFKK              Q
Sbjct: 126 KVARGYDMYECLVERCGLKFKSYNSRQRHLVDKHKFPTSFEFFKKAKPSKKHRLKSQRKQ 185

Query: 355 AHKTEEASSAMQVDEETMSGLISAVSKLNTSDSCPSSISLGRRNTRGLAFVPRSVQHD*K 176
           A   E++S  M+V+  +M  L+SAVSKLNTSDS PSSIS GRR+ +GL+FVPR+VQ    
Sbjct: 186 AVCKEDSSGMMEVENASMDDLVSAVSKLNTSDSTPSSISFGRRH-KGLSFVPRAVQRGGG 244

Query: 175 PDSAPAGTKR 146
            +S  + TK+
Sbjct: 245 SNSTASVTKK 254


Top