BLASTX nr result

ID: Panax21_contig00032049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032049
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_003613234.1| Polygalacturonase-1 non-catalytic subunit be...   163   2e-38
ref|XP_002525383.1| Polygalacturonase-1 non-catalytic subunit be...   163   2e-38
ref|NP_001234835.1| polygalacturonase-1 non-catalytic subunit be...   162   3e-38
ref|XP_004173618.1| PREDICTED: probable polygalacturonase non-ca...   162   3e-38

>ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|222863660|gb|EEF00791.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/119 (65%), Positives = 91/119 (76%)
 Frame = +2

Query: 92  DLPAGENPFTPKAYLIRYWKKQVSNDLPKPEFLLNKASPLTAVESATFSKLADQNALPTH 271
           D   GE+PFT KA LIRYW K++   LPK  FLL+KASPL+ V+ ATFSKLA QNAL T 
Sbjct: 12  DSANGESPFTAKASLIRYWNKEIHTGLPKSAFLLSKASPLSPVDLATFSKLASQNALSTQ 71

Query: 272 LPQFCSSAKLLCFPDVSPSLEKHDQNVDFSSYMDRNFTNYGTLKGGDTDSFENYSDGEN 448
            P FCSSAKL CFPD+SPSLEKHDQ+  F+ Y ++NFTNYGT + G  DSF+NYSDG N
Sbjct: 72  FPAFCSSAKLFCFPDLSPSLEKHDQDSHFAFYFNKNFTNYGTGRAGGADSFKNYSDGVN 130


>ref|XP_003613234.1| Polygalacturonase-1 non-catalytic subunit beta [Medicago
           truncatula] gi|355514569|gb|AES96192.1|
           Polygalacturonase-1 non-catalytic subunit beta [Medicago
           truncatula]
          Length = 630

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/129 (60%), Positives = 97/129 (75%)
 Frame = +2

Query: 62  TVAGAGRKLFDLPAGENPFTPKAYLIRYWKKQVSNDLPKPEFLLNKASPLTAVESATFSK 241
           TV  AG    D+   +NPFTPKA+L RYW K++ N LPKP FL +KASPL+ VE+ATF+K
Sbjct: 19  TVISAGD---DVAGDKNPFTPKAFLNRYWDKEIRNGLPKPSFLFSKASPLSTVEAATFAK 75

Query: 242 LADQNALPTHLPQFCSSAKLLCFPDVSPSLEKHDQNVDFSSYMDRNFTNYGTLKGGDTDS 421
           LA  N L T LP+FCS+A LLC P+V+ SLEKH  +V+F+ Y D+NFTNYGT + G  DS
Sbjct: 76  LASGNVLSTRLPEFCSAANLLCLPEVAQSLEKHGDDVNFAIYRDKNFTNYGTDRPGGFDS 135

Query: 422 FENYSDGEN 448
           F+NYSDGEN
Sbjct: 136 FKNYSDGEN 144


>ref|XP_002525383.1| Polygalacturonase-1 non-catalytic subunit beta precursor, putative
           [Ricinus communis] gi|223535346|gb|EEF37021.1|
           Polygalacturonase-1 non-catalytic subunit beta
           precursor, putative [Ricinus communis]
          Length = 631

 Score =  163 bits (412), Expect = 2e-38
 Identities = 72/114 (63%), Positives = 95/114 (83%)
 Frame = +2

Query: 107 ENPFTPKAYLIRYWKKQVSNDLPKPEFLLNKASPLTAVESATFSKLADQNALPTHLPQFC 286
           E+P +PKA LIRYW K++ N+LPK +F+L+KASPL  +E+ATFSKLA QNAL T LP FC
Sbjct: 35  ESPLSPKASLIRYWNKEIHNNLPKSQFILSKASPLNVIEAATFSKLAAQNALSTKLPAFC 94

Query: 287 SSAKLLCFPDVSPSLEKHDQNVDFSSYMDRNFTNYGTLKGGDTDSFENYSDGEN 448
           SSAKLLCFPD+SPSLEKHD++ +F++Y+++NFTNYG    G  ++F+NYSD +N
Sbjct: 95  SSAKLLCFPDLSPSLEKHDRDTNFANYLNKNFTNYGNEMAGGVNAFKNYSDNDN 148


>ref|NP_001234835.1| polygalacturonase-1 non-catalytic subunit beta precursor [Solanum
           lycopersicum] gi|75220933|sp|Q40161.1|GP1_SOLLC RecName:
           Full=Polygalacturonase-1 non-catalytic subunit beta;
           AltName: Full=AroGP1; AltName: Full=Polygalacturonase
           converter; Short=PG converter; Flags: Precursor
           gi|170480|gb|AAA34181.1| polygalacturonase isoenzyme 1
           beta subunit [Solanum lycopersicum]
           gi|1762586|gb|AAB39547.1| polygalacturonase isoenzyme 1
           beta subunit [Solanum lycopersicum]
          Length = 630

 Score =  162 bits (410), Expect = 3e-38
 Identities = 84/133 (63%), Positives = 101/133 (75%), Gaps = 12/133 (9%)
 Frame = +2

Query: 86  LFDLPA--------GE--NPFTPKAYLIRYWKKQVSNDLPKPEFLLNKASPLTAVESATF 235
           LF LP+        GE  NPFTPK YLIRYWKKQ+SNDLPKP FLLNKASPL A + AT+
Sbjct: 16  LFSLPSFNVVVGGDGESGNPFTPKGYLIRYWKKQISNDLPKPWFLLNKASPLNAAQYATY 75

Query: 236 SKL-ADQNALPTHLPQFCSSAKLLCFPDVSPSLEKHDQNVDFSSYMDRNFTNYGTLKGG- 409
           +KL ADQNAL T L  FCSSA L+C PD+SPSLEKH  ++ F++Y D+NFTNYGT + G 
Sbjct: 76  TKLVADQNALTTQLHTFCSSANLMCAPDLSPSLEKHSGDIHFATYSDKNFTNYGTNEPGI 135

Query: 410 DTDSFENYSDGEN 448
             ++F+NYS+GEN
Sbjct: 136 GVNTFKNYSEGEN 148


>ref|XP_004173618.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like, partial [Cucumis sativus]
          Length = 612

 Score =  162 bits (409), Expect = 3e-38
 Identities = 72/114 (63%), Positives = 93/114 (81%)
 Frame = +2

Query: 107 ENPFTPKAYLIRYWKKQVSNDLPKPEFLLNKASPLTAVESATFSKLADQNALPTHLPQFC 286
           ++PFTPKA+L RYW K+V ND PKP FL +KASPLTAV+SA F+KLA +NAL + LP FC
Sbjct: 20  DDPFTPKAFLNRYWNKEVRNDFPKPSFLFSKASPLTAVQSAAFAKLAAENALSSRLPDFC 79

Query: 287 SSAKLLCFPDVSPSLEKHDQNVDFSSYMDRNFTNYGTLKGGDTDSFENYSDGEN 448
           S+A LLCFPD+SPSL KHD++ +F+ Y ++NFT YGT + G  DSF+NYS+G+N
Sbjct: 80  SAANLLCFPDLSPSLAKHDRDSNFAVYSNKNFTTYGTQRSGGIDSFKNYSNGDN 133


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