BLASTX nr result

ID: Panax21_contig00032047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032047
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31329.3| unnamed protein product [Vitis vinifera]              186   2e-45
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]   184   6e-45
ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2...   178   4e-43
ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40

>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  186 bits (471), Expect = 2e-45
 Identities = 92/134 (68%), Positives = 102/134 (76%)
 Frame = -2

Query: 437 PTPEMWATLIGACRIHCNIDVGDWAAEKLLEMRPQNSGYYVLIANMYADAKRLDKLKKVR 258
           PTP MWATLIGACRIH N ++G+WAAEKLLEM+P+N GYYVLIANMYA A   +KL KVR
Sbjct: 561 PTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVR 620

Query: 257 TLMRDLGVSKAPGCAWVDSGVGISPFLVGDMSNTRATEIYPLLVGLTKQMKEAGYVACED 78
             MRDLGV KAPGCAWVD G G SPFLV D SN  A EIYPLL GLT  MKEAGY++ ED
Sbjct: 621 IFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVMKEAGYISSED 680

Query: 77  SCSESEVLKE*DEQ 36
             S  E   E +E+
Sbjct: 681 FGSGDETSGEFNEE 694


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71490-like
            [Vitis vinifera]
          Length = 748

 Score =  186 bits (471), Expect = 2e-45
 Identities = 92/134 (68%), Positives = 102/134 (76%)
 Frame = -2

Query: 437  PTPEMWATLIGACRIHCNIDVGDWAAEKLLEMRPQNSGYYVLIANMYADAKRLDKLKKVR 258
            PTP MWATLIGACRIH N ++G+WAAEKLLEM+P+N GYYVLIANMYA A   +KL KVR
Sbjct: 606  PTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVR 665

Query: 257  TLMRDLGVSKAPGCAWVDSGVGISPFLVGDMSNTRATEIYPLLVGLTKQMKEAGYVACED 78
              MRDLGV KAPGCAWVD G G SPFLV D SN  A EIYPLL GLT  MKEAGY++ ED
Sbjct: 666  IFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVMKEAGYISSED 725

Query: 77   SCSESEVLKE*DEQ 36
              S  E   E +E+
Sbjct: 726  FGSGDETSGEFNEE 739


>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  184 bits (467), Expect = 6e-45
 Identities = 91/134 (67%), Positives = 102/134 (76%)
 Frame = -2

Query: 437  PTPEMWATLIGACRIHCNIDVGDWAAEKLLEMRPQNSGYYVLIANMYADAKRLDKLKKVR 258
            PTP MWATLIGACRIH N ++G+WAAEKLLEM+P+N GYYVLIANMYA A   +KL KVR
Sbjct: 680  PTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVR 739

Query: 257  TLMRDLGVSKAPGCAWVDSGVGISPFLVGDMSNTRATEIYPLLVGLTKQMKEAGYVACED 78
              MRDLGV KAPGCAWVD G G SPFLV D SN  A EIYPLL GLT  +KEAGY++ ED
Sbjct: 740  XFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVIKEAGYISSED 799

Query: 77   SCSESEVLKE*DEQ 36
              S  E   E +E+
Sbjct: 800  FGSGDETSGEFNEE 813


>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score =  178 bits (452), Expect = 4e-43
 Identities = 86/130 (66%), Positives = 101/130 (77%)
 Frame = -2

Query: 437 PTPEMWATLIGACRIHCNIDVGDWAAEKLLEMRPQNSGYYVLIANMYADAKRLDKLKKVR 258
           PT  MWATL+GACRIH N ++G+WAAEKLLEM+P+N GYYVLIANM+A A R  KL +VR
Sbjct: 548 PTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPENPGYYVLIANMHAAAGRWSKLAEVR 607

Query: 257 TLMRDLGVSKAPGCAWVDSGVGISPFLVGDMSNTRATEIYPLLVGLTKQMKEAGYVACED 78
           T MRDLGV KAPGC WVD G G SPF+VGD S   + ++Y LL GLT  MK+AGYVA E+
Sbjct: 608 TYMRDLGVRKAPGCTWVDVGSGFSPFVVGDTSKHNSNDLYELLEGLTDLMKDAGYVAGEN 667

Query: 77  SCSESEVLKE 48
             SE EVL+E
Sbjct: 668 FSSEDEVLEE 677


>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/130 (64%), Positives = 98/130 (75%)
 Frame = -2

Query: 437 PTPEMWATLIGACRIHCNIDVGDWAAEKLLEMRPQNSGYYVLIANMYADAKRLDKLKKVR 258
           PT  MWATL+GACRIH N ++G+WAA KLLEM+P +SGYYVLIANMYA A    KL +VR
Sbjct: 586 PTSAMWATLLGACRIHGNTEMGEWAAGKLLEMKPDHSGYYVLIANMYAAAGSWRKLAEVR 645

Query: 257 TLMRDLGVSKAPGCAWVDSGVGISPFLVGDMSNTRATEIYPLLVGLTKQMKEAGYVACED 78
           T MR+LGV KAPGCAWVD G   SPFLVGD SN  A+EIYPL+ GL + MK+AGYV  E+
Sbjct: 646 TYMRNLGVRKAPGCAWVDVGSEFSPFLVGDSSNPHASEIYPLMDGLNELMKDAGYVRSEE 705

Query: 77  SCSESEVLKE 48
             S  E  +E
Sbjct: 706 LVSSEEDFEE 715


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