BLASTX nr result

ID: Panax21_contig00032037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032037
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282323.1| PREDICTED: uncharacterized protein LOC100257...    90   2e-16
emb|CAN77236.1| hypothetical protein VITISV_024209 [Vitis vinifera]    87   1e-15
ref|XP_002314269.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002530288.1| protein binding protein, putative [Ricinus c...    84   1e-14
ref|XP_004166546.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    83   3e-14

>ref|XP_002282323.1| PREDICTED: uncharacterized protein LOC100257089 [Vitis vinifera]
          Length = 557

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 59/140 (42%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
 Frame = -3

Query: 409 VQIKMXXXXXXXXXXXNFLLTPSPSNTRLNVXXXXXXXXXXXSMRRLLPKLSFKYKNSSS 230
           V+IKM           NF LTPSPS+TR+             S + LLPKLSFK ++++S
Sbjct: 101 VRIKMPPTPSPTPKKVNFFLTPSPSDTRVTGSPGPSATKGKSSKKSLLPKLSFKNRSATS 160

Query: 229 DVEKATTLAPGGP----QEELSISRAWSLAKIFTPRINRTSSLTVTPIARXXXXXXXXXX 62
           D +KA  LA GG     +E+ SISR+ SL+KIFTP++NRTSSL  TP+            
Sbjct: 161 DSDKAANLALGGSSTTSREKPSISRSLSLSKIFTPKMNRTSSLPGTPLEHSNPESVSGGS 220

Query: 61  XXXXXXLDTKAAQRHISRSL 2
                  DT+   R ISRSL
Sbjct: 221 IGSALKSDTRGVHRRISRSL 240


>emb|CAN77236.1| hypothetical protein VITISV_024209 [Vitis vinifera]
          Length = 750

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 58/140 (41%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
 Frame = -3

Query: 409 VQIKMXXXXXXXXXXXNFLLTPSPSNTRLNVXXXXXXXXXXXSMRRLLPKLSFKYKNSSS 230
           V+IKM           NF LTPSPS+TR+             S + LLPKLSFK ++++S
Sbjct: 114 VRIKMPPTPSPTPKKVNFFLTPSPSDTRVTGSPGPSATKGKSSKKSLLPKLSFKNRSATS 173

Query: 229 DVEKATTLAPGGP----QEELSISRAWSLAKIFTPRINRTSSLTVTPIARXXXXXXXXXX 62
           D +KA  LA GG     +E+ SISR+ SL+KIFTP++ RTSSL  TP+            
Sbjct: 174 DSDKAANLALGGSSTTSREKPSISRSLSLSKIFTPKMXRTSSLPGTPLEHSNPESVSGGS 233

Query: 61  XXXXXXLDTKAAQRHISRSL 2
                  DT+   R ISRSL
Sbjct: 234 IGSALKSDTRGVHRRISRSL 253


>ref|XP_002314269.1| predicted protein [Populus trichocarpa] gi|222850677|gb|EEE88224.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 58/139 (41%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
 Frame = -3

Query: 409 VQIKMXXXXXXXXXXXNFLLTPSPSNTRLNVXXXXXXXXXXXSMRRLLPKLSFKYKNSSS 230
           V I+M           NFLLTPS  + R +            S++ LLPKLSFK +NS+ 
Sbjct: 68  VVIRMPPTPSPSPRKVNFLLTPSSVDARASGSPAPSSSKGKSSLKSLLPKLSFKSRNSTL 127

Query: 229 DVEKATTLAPGG---PQEELSISRAWSLAKIFTPRINRTSSLTVTPIARXXXXXXXXXXX 59
           D+EKA TLAP     P+++ SISR+ SL +IFTPR+ +TSSL VTPIA            
Sbjct: 128 DIEKAATLAPDASSIPRKKPSISRSLSLTRIFTPRMKQTSSLPVTPIANSKAESARGGSV 187

Query: 58  XXXXXLDTKAAQRHISRSL 2
                   K  QR I RSL
Sbjct: 188 GGMLNSSRKGTQRQIFRSL 206


>ref|XP_002530288.1| protein binding protein, putative [Ricinus communis]
           gi|223530186|gb|EEF32095.1| protein binding protein,
           putative [Ricinus communis]
          Length = 495

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 61/140 (43%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
 Frame = -3

Query: 409 VQIKMXXXXXXXXXXXNFLLTPSPSNTRLNVXXXXXXXXXXXSMRRLLPKLSFKYKNSSS 230
           V IKM           NFLLTP+ S+ R              S+R LLPKLSFK + S  
Sbjct: 66  VVIKMPPTPSPTPRKVNFLLTPTSSDARACGSPGPSSTRGKSSLRSLLPKLSFKSRISML 125

Query: 229 DVEKATTLAPGG----PQEELSISRAWSLAKIFTPRINRTSSLTVTPIARXXXXXXXXXX 62
           D EKA  LAP      P+E+ SISR+ SL+KIFTPR+ RTSSL VT IA           
Sbjct: 126 DAEKAANLAPDSSCTMPREKPSISRSLSLSKIFTPRMKRTSSLPVTSIANSNPDSIRGGS 185

Query: 61  XXXXXXLDTKAAQRHISRSL 2
                    K A+R ISRSL
Sbjct: 186 ISGALSSSGKGARRQISRSL 205


>ref|XP_004166546.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101231491 [Cucumis sativus]
          Length = 485

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 59/125 (47%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
 Frame = -3

Query: 358 FLLTPSPSNTRLNVXXXXXXXXXXXS--MRRLLPKLSFKYKNSSSDVEKATTLA----PG 197
           FLLTPSPS  R+N               +R L PKLSF ++ SSSDVEK   LA      
Sbjct: 80  FLLTPSPSEVRINGSGSPGPSSSRGKSSIRSLFPKLSFIHR-SSSDVEKVANLALEGSSN 138

Query: 196 GPQEELSISRAWSLAKIFTPRINRTSSLTVTPIARXXXXXXXXXXXXXXXXLDTKAAQRH 17
           G QE+ SISR+ SL+KIFTPRI RTSSL VTPI                  +  K AQR 
Sbjct: 139 GAQEKPSISRSLSLSKIFTPRIKRTSSLPVTPIIHSNPESAHGGTRGGATNVIGKGAQRQ 198

Query: 16  ISRSL 2
           I+RSL
Sbjct: 199 IARSL 203


Top