BLASTX nr result

ID: Panax21_contig00032017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032017
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vi...   166   2e-39
ref|XP_002519531.1| Auxin response factor, putative [Ricinus com...   161   4e-38
gb|ACI13681.1| putative auxin response factor ARF16 [Malus x dom...   160   1e-37
ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cu...   152   2e-35
ref|XP_002326354.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33

>ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 701

 Score =  166 bits (419), Expect = 2e-39
 Identities = 89/146 (60%), Positives = 95/146 (65%)
 Frame = +3

Query: 3   CSGVTVSPNPTGNSSSEGNADKMANIXXXXXXXXXXXXXXXFAFNQHEIPERPSCEGLHW 182
           CSG TVSP  TGNSSSEGN DKMAN                 A +QH +PE  SCEG   
Sbjct: 549 CSGDTVSPVITGNSSSEGNQDKMANFSDGSGS----------ALHQHGLPEHSSCEGYQT 598

Query: 183 YKGNQKESETNLETGHCKVFMESEDVGRTLDXXXXXXXXXXXRKLANIFGIESSEMLNHV 362
           YK N +E+E NLETGHCKVFMESEDVGRTLD            KLA +F IE SEM NHV
Sbjct: 599 YKVNHRETEPNLETGHCKVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIEDSEMRNHV 658

Query: 363 LYRDLTGTVKQIGDEPFSDFIKTARR 440
           LYRD TG VK IGDEPFSDF KTA+R
Sbjct: 659 LYRDATGAVKHIGDEPFSDFTKTAKR 684


>ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
           gi|223541394|gb|EEF42945.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 702

 Score =  161 bits (408), Expect = 4e-38
 Identities = 86/145 (59%), Positives = 99/145 (68%)
 Frame = +3

Query: 6   SGVTVSPNPTGNSSSEGNADKMANIXXXXXXXXXXXXXXXFAFNQHEIPERPSCEGLHWY 185
           SG TVSP  TGNSSSEGN DK+AN                 A +Q  +PE  S EG  W 
Sbjct: 554 SGDTVSPVLTGNSSSEGNLDKIANFSDGSGS----------ALHQQGLPEHSSYEGFQWC 603

Query: 186 KGNQKESETNLETGHCKVFMESEDVGRTLDXXXXXXXXXXXRKLANIFGIESSEMLNHVL 365
           KGN++E+E +LETGHCKVFMESEDVGRTLD           RKLA++FGIE+SE LN+VL
Sbjct: 604 KGNRQETEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYRKLADMFGIENSETLNNVL 663

Query: 366 YRDLTGTVKQIGDEPFSDFIKTARR 440
           YRD+ G VK IGDEPFSDF+KTARR
Sbjct: 664 YRDIAGIVKHIGDEPFSDFMKTARR 688


>gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  160 bits (405), Expect = 1e-37
 Identities = 88/147 (59%), Positives = 98/147 (66%), Gaps = 2/147 (1%)
 Frame = +3

Query: 6   SGVTVSPNPTGNSSSEGNADKMANIXXXXXXXXXXXXXXXFAFNQHEIPERPSCEGLHWY 185
           SG TVSP  TGNSSS+GNADKMAN                    Q  I ER SCEG  WY
Sbjct: 553 SGDTVSPVLTGNSSSDGNADKMANHSDNSGSAL-----------QQSIQERSSCEGFQWY 601

Query: 186 KGNQKESETNLETGHCKVFMESEDVGRTLDXXXXXXXXXXXRKLANIFGIESSEMLNHVL 365
           K N+ E+E +LETGHCKVFMESEDVGRTLD           RKLA++FGI++SE LNHVL
Sbjct: 602 KDNRHETEPHLETGHCKVFMESEDVGRTLDLSLLGSYDELYRKLADMFGIDNSETLNHVL 661

Query: 366 YRDLTGTVKQIGDEPF--SDFIKTARR 440
           YRD TG VK +GDEPF  SDF+KTARR
Sbjct: 662 YRDGTGAVKHVGDEPFSCSDFMKTARR 688


>ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 698

 Score =  152 bits (385), Expect = 2e-35
 Identities = 80/145 (55%), Positives = 94/145 (64%)
 Frame = +3

Query: 6   SGVTVSPNPTGNSSSEGNADKMANIXXXXXXXXXXXXXXXFAFNQHEIPERPSCEGLHWY 185
           SG TVSP  TGNSSS+GN DKM N+                A +Q  +PE  + E   WY
Sbjct: 550 SGDTVSPVGTGNSSSDGNGDKMTNLSDGSGS----------ALHQQGLPEGSAGENFQWY 599

Query: 186 KGNQKESETNLETGHCKVFMESEDVGRTLDXXXXXXXXXXXRKLANIFGIESSEMLNHVL 365
           K N +E + NL+ GHCKVFMESEDVGRTLD           RKL N+FGI++SE LNHVL
Sbjct: 600 KDNCQEIDPNLDIGHCKVFMESEDVGRTLDLSSLGSYEELYRKLGNMFGIDNSETLNHVL 659

Query: 366 YRDLTGTVKQIGDEPFSDFIKTARR 440
           YRD++G VK +GDE FSDFIKTARR
Sbjct: 660 YRDVSGAVKHVGDEQFSDFIKTARR 684


>ref|XP_002326354.1| predicted protein [Populus trichocarpa] gi|222833547|gb|EEE72024.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score =  145 bits (365), Expect = 4e-33
 Identities = 76/146 (52%), Positives = 90/146 (61%)
 Frame = +3

Query: 3   CSGVTVSPNPTGNSSSEGNADKMANIXXXXXXXXXXXXXXXFAFNQHEIPERPSCEGLHW 182
           C G   SP  TGNSSSEGN DKMAN                   ++  +PE  SCE L W
Sbjct: 556 CPGNAASPVLTGNSSSEGNLDKMANFSDGSVS----------TLHRRGLPECSSCEELQW 605

Query: 183 YKGNQKESETNLETGHCKVFMESEDVGRTLDXXXXXXXXXXXRKLANIFGIESSEMLNHV 362
            K   ++SE +LETGHCKVFM+SEDVGRTLD           RKLAN+FG+ +SE  ++V
Sbjct: 606 NKDKHQKSEPSLETGHCKVFMDSEDVGRTLDLSLLGSYEELYRKLANMFGLRNSEKFSNV 665

Query: 363 LYRDLTGTVKQIGDEPFSDFIKTARR 440
           LYRD+ G  K IG+EPFSDF KTARR
Sbjct: 666 LYRDINGITKHIGEEPFSDFFKTARR 691


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