BLASTX nr result

ID: Panax21_contig00031498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031498
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529505.1| conserved hypothetical protein [Ricinus comm...   174   7e-42
emb|CBI29830.3| unnamed protein product [Vitis vinifera]              163   1e-38
ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vi...   162   3e-38
ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_004168520.1| PREDICTED: RRP12-like protein-like, partial ...   136   2e-30

>ref|XP_002529505.1| conserved hypothetical protein [Ricinus communis]
            gi|223531021|gb|EEF32874.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1167

 Score =  174 bits (441), Expect = 7e-42
 Identities = 82/161 (50%), Positives = 117/161 (72%)
 Frame = -1

Query: 483  SEKLLQALTDVLFELPHEKRTYLKSAIGCLASISDSSVMEKIFISSLERFQLVDDSGDCG 304
            S +LLQAL D+  +   EKR Y+K A+GCLASI+DSS+ + IF+S LERFQLV+D G+  
Sbjct: 649  STELLQALVDLFVDSLPEKRLYIKDAVGCLASITDSSITKNIFMSLLERFQLVNDRGEFE 708

Query: 303  KLVNHSDGLVNKEEGISNSAGKDAERCVILELACSIAEGASEDLVDRIFNLIKHAFQEAD 124
            +LVNH D L+  E+G   +  +D +RCVI+ELA S+ EGA EDL++ I+N +   F+   
Sbjct: 709  QLVNHGDELIEPEQGSFRANEEDGKRCVIMELASSLIEGAKEDLINLIYNFVISVFKNTA 768

Query: 123  EIGQCEAYLTLNKILEKHSWFCSSKFIEVMDLLVGLKSPVD 1
                CEAY TL+++LE+H+WFCS++F E+++LL+GLK P D
Sbjct: 769  VTSHCEAYHTLSRVLEEHAWFCSARFAELIELLIGLKPPTD 809


>emb|CBI29830.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  163 bits (413), Expect = 1e-38
 Identities = 84/161 (52%), Positives = 115/161 (71%)
 Frame = -1

Query: 483  SEKLLQALTDVLFELPHEKRTYLKSAIGCLASISDSSVMEKIFISSLERFQLVDDSGDCG 304
            S +LLQALTD+ F  P EKR+YLK AIGCLASISDSS+ ++I ISSLER +L++  G+  
Sbjct: 629  SMELLQALTDLFFGSPPEKRSYLKDAIGCLASISDSSITKRILISSLERLELINGVGEFE 688

Query: 303  KLVNHSDGLVNKEEGISNSAGKDAERCVILELACSIAEGASEDLVDRIFNLIKHAFQEAD 124
             + N            S++  KD +R V +ELA S+ EGA+EDL+D I+  I+H    AD
Sbjct: 689  NVGN------------SSTTEKDTQRRVTMELASSLVEGANEDLIDLIYKFIRHTLLTAD 736

Query: 123  EIGQCEAYLTLNKILEKHSWFCSSKFIEVMDLLVGLKSPVD 1
            E GQC+AY  L+++LE+H+WFCSS+FIE+++LL+GLKS  D
Sbjct: 737  EEGQCKAYYALSRVLEEHAWFCSSQFIELVELLLGLKSTDD 777


>ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vinifera]
          Length = 1128

 Score =  162 bits (409), Expect = 3e-38
 Identities = 83/161 (51%), Positives = 115/161 (71%)
 Frame = -1

Query: 483  SEKLLQALTDVLFELPHEKRTYLKSAIGCLASISDSSVMEKIFISSLERFQLVDDSGDCG 304
            S +LLQALTD+ F  P EKR+YLK AIGCLASISDSS+ ++I ISSLER +L++  G+  
Sbjct: 645  SMELLQALTDLFFGSPPEKRSYLKDAIGCLASISDSSITKRILISSLERLELINGVGEFE 704

Query: 303  KLVNHSDGLVNKEEGISNSAGKDAERCVILELACSIAEGASEDLVDRIFNLIKHAFQEAD 124
             + N            S++  KD +R V +ELA S+ EGA+EDL+D I+  I+H    +D
Sbjct: 705  NVGN------------SSTTEKDTQRRVTMELASSLVEGANEDLIDLIYKFIRHTLLVSD 752

Query: 123  EIGQCEAYLTLNKILEKHSWFCSSKFIEVMDLLVGLKSPVD 1
            E GQC+AY  L+++LE+H+WFCSS+FIE+++LL+GLKS  D
Sbjct: 753  EEGQCKAYYALSRVLEEHAWFCSSQFIELVELLLGLKSTDD 793


>ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|222854916|gb|EEE92463.1|
            predicted protein [Populus trichocarpa]
          Length = 1177

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/161 (47%), Positives = 108/161 (67%)
 Frame = -1

Query: 483  SEKLLQALTDVLFELPHEKRTYLKSAIGCLASISDSSVMEKIFISSLERFQLVDDSGDCG 304
            S KLL AL D+  +    K +Y+K AI CLASIS+SSV +K+F+S L+RF+ V   G+  
Sbjct: 647  SSKLLHALADLFVDSQSGKPSYIKDAIACLASISNSSVTQKVFMSLLKRFRFVTGEGEFQ 706

Query: 303  KLVNHSDGLVNKEEGISNSAGKDAERCVILELACSIAEGASEDLVDRIFNLIKHAFQEAD 124
            +  +  D L+ +E    N   KD  RCV++ELA S+  GA  D +D I+N +   FQ  D
Sbjct: 707  QPKSDGDELIEEEARSLNVQEKDVHRCVMMELASSLVVGAKTDFIDLIYNFVVFIFQATD 766

Query: 123  EIGQCEAYLTLNKILEKHSWFCSSKFIEVMDLLVGLKSPVD 1
              G CEAY TL++IL++H+WFCSS+F+E++DLL+GLKSP D
Sbjct: 767  VTGHCEAYHTLSRILQEHAWFCSSRFVELIDLLLGLKSPDD 807


>ref|XP_004168520.1| PREDICTED: RRP12-like protein-like, partial [Cucumis sativus]
          Length = 726

 Score =  136 bits (343), Expect = 2e-30
 Identities = 74/163 (45%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
 Frame = -1

Query: 483 SEKLLQALTDVLFELPHEKRTYLKSAIGCLASISDSSVMEKIFISSLERFQLVDDSGDCG 304
           S  LLQAL ++  +    KR++LK AIGCLASI DS V +K+F+S LERFQ ++   +  
Sbjct: 194 STNLLQALAELFVDSIPTKRSHLKDAIGCLASIMDSRVTKKVFMSLLERFQFLNTKDE-- 251

Query: 303 KLVNHSDGLVNKEEGISNSAGKDA--ERCVILELACSIAEGASEDLVDRIFNLIKHAFQE 130
                 +   N +E   N+ GK    ERCV+LELA +I  GA EDL+D I+  +K +FQ 
Sbjct: 252 ----FEEREANADESAQNAEGKSRTRERCVMLELAAAIVRGADEDLIDLIYKFVKFSFQG 307

Query: 129 ADEIGQCEAYLTLNKILEKHSWFCSSKFIEVMDLLVGLKSPVD 1
           +      E Y TL++ILE+H+WF SS+F E++D+L+ L+SPVD
Sbjct: 308 SLGSDHHEVYQTLSRILEEHAWFASSRFPELVDMLIDLQSPVD 350


Top