BLASTX nr result

ID: Panax21_contig00031491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031491
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268291.1| PREDICTED: transcription factor bHLH135 [Vit...    68   7e-10
gb|AAM74282.1|AC083943_22 Hypothetical protein similar to putati...    63   2e-08
ref|NP_001152510.1| DNA binding protein [Zea mays] gi|195657019|...    60   1e-07
ref|XP_002452552.1| hypothetical protein SORBIDRAFT_04g027930 [S...    60   2e-07
ref|XP_002511555.1| DNA binding protein, putative [Ricinus commu...    59   4e-07

>ref|XP_002268291.1| PREDICTED: transcription factor bHLH135 [Vitis vinifera]
           gi|297733999|emb|CBI15246.3| unnamed protein product
           [Vitis vinifera]
          Length = 90

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
 Frame = +1

Query: 10  MSSRRIRATRRIKDDELNGLVLKLQAMLPDXXXXXXXXXXXXXXKILKETCNYIKKLHRE 189
           MS++R RA+R + DDE+N L+LKLQA+LP               +ILKETC+YIK+LHRE
Sbjct: 1   MSTQRARASR-VTDDEINDLILKLQALLPHSNQRRTSTGASAW-RILKETCSYIKRLHRE 58

Query: 190 V-EXXXXXXXXXXXXXXTNGVDVEILRSLLQQ 282
           V +               NGV+VE LRSLLQ+
Sbjct: 59  VGDLSERLSQLLDSLDNINGVEVEQLRSLLQR 90


>gb|AAM74282.1|AC083943_22 Hypothetical protein similar to putative DNA binding proteins
           [Oryza sativa Japonica Group] gi|31431968|gb|AAP53674.1|
           bHLH family protein, putative, expressed [Oryza sativa
           Japonica Group] gi|125531848|gb|EAY78413.1| hypothetical
           protein OsI_33502 [Oryza sativa Indica Group]
           gi|125574725|gb|EAZ16009.1| hypothetical protein
           OsJ_31454 [Oryza sativa Japonica Group]
          Length = 88

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/90 (40%), Positives = 49/90 (54%)
 Frame = +1

Query: 10  MSSRRIRATRRIKDDELNGLVLKLQAMLPDXXXXXXXXXXXXXXKILKETCNYIKKLHRE 189
           MS RR  A+ RI DDE+N L+ KLQ++LP+              K+LKE C+YIK LHRE
Sbjct: 1   MSGRR--ASGRITDDEINELISKLQSLLPESSRRRGATSRSPATKLLKEMCSYIKSLHRE 58

Query: 190 VEXXXXXXXXXXXXXXTNGVDVEILRSLLQ 279
           V+              +N    +I+RSLL+
Sbjct: 59  VDDLSERLSELMATMDSNSPQADIIRSLLR 88


>ref|NP_001152510.1| DNA binding protein [Zea mays] gi|195657019|gb|ACG47977.1| DNA
           binding protein [Zea mays] gi|413938887|gb|AFW73438.1|
           hypothetical protein ZEAMMB73_736000 [Zea mays]
          Length = 89

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/90 (40%), Positives = 47/90 (52%)
 Frame = +1

Query: 10  MSSRRIRATRRIKDDELNGLVLKLQAMLPDXXXXXXXXXXXXXXKILKETCNYIKKLHRE 189
           MSSRR  +   I +DE+N L+ KLQA+LP               K+LKETC+YIK LHRE
Sbjct: 1   MSSRRPSSRGNISEDEINELISKLQALLPSSRRRGSGQASTT--KLLKETCSYIKSLHRE 58

Query: 190 VEXXXXXXXXXXXXXXTNGVDVEILRSLLQ 279
           V+               N    EI+RS+L+
Sbjct: 59  VDDLSDRLSDLMATMDHNSPGAEIIRSILR 88


>ref|XP_002452552.1| hypothetical protein SORBIDRAFT_04g027930 [Sorghum bicolor]
           gi|241932383|gb|EES05528.1| hypothetical protein
           SORBIDRAFT_04g027930 [Sorghum bicolor]
          Length = 90

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +1

Query: 10  MSSRRIRATR-RIKDDELNGLVLKLQAMLPDXXXXXXXXXXXXXXKILKETCNYIKKLHR 186
           MSSRR  ++R  I +DE+N L+ KLQA+LP               K+LKETC+YIK LHR
Sbjct: 1   MSSRRSSSSRGNISEDEINELISKLQALLPSSRRRGSGQASTT--KLLKETCSYIKSLHR 58

Query: 187 EVEXXXXXXXXXXXXXXTNGVDVEILRSLLQ 279
           EV+               N    EI+RS+L+
Sbjct: 59  EVDDLSDRLSDLMSTMDHNSPGAEIIRSILR 89


>ref|XP_002511555.1| DNA binding protein, putative [Ricinus communis]
           gi|223550670|gb|EEF52157.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 89

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/91 (41%), Positives = 45/91 (49%)
 Frame = +1

Query: 10  MSSRRIRATRRIKDDELNGLVLKLQAMLPDXXXXXXXXXXXXXXKILKETCNYIKKLHRE 189
           MSSRR  A  +   DELN LVLKLQA+LP               KIL+ETC+YI+ L  E
Sbjct: 1   MSSRRSGAASKFTQDELNDLVLKLQALLPQ--LNQRQASRVSVSKILQETCSYIRSLQSE 58

Query: 190 VEXXXXXXXXXXXXXXTNGVDVEILRSLLQQ 282
            +                 VD+E LRS LQQ
Sbjct: 59  ADDLSEKLSQLLDSFNIADVDIETLRSNLQQ 89


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