BLASTX nr result

ID: Panax21_contig00031485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031485
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]   181   7e-44
ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   177   6e-43
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              177   6e-43
ref|XP_002518776.1| DNA repair and recombination protein RAD54B,...   159   2e-37
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot...   154   7e-36

>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
          Length = 985

 Score =  181 bits (458), Expect = 7e-44
 Identities = 95/158 (60%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
 Frame = +1

Query: 1    MNCIRCESGGEMADDMPEDCRELDGVNFSNEDCKS---DQEDIGGFAGIAGCLHKLKSSE 171
            MNC RC++     D+ PE  RE DG    NE C+S   D +DIGGFAGI GCLHKLK SE
Sbjct: 702  MNCNRCQN----YDERPESVREEDGFKSKNEGCQSYQMDCDDIGGFAGITGCLHKLKRSE 757

Query: 172  KQVGTPLEEDLGSWGHHFNPTSVPDAILQASAGNEVTFVFSNQVNGKLVPVESMVSPKTD 351
            KQVGTPLEEDLGSWGHHF  TSVPDAI QASAG+EVTFVF+NQV+GKLVPVES V     
Sbjct: 758  KQVGTPLEEDLGSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQVDGKLVPVESKVRANMQ 817

Query: 352  GVDVDKNQFHQKENVSLKSVLTSRHPQARSWNSSIGDT 465
            GV+ +KNQ  ++  +  K  L S+H Q+    S+ GD+
Sbjct: 818  GVEANKNQSDKRGKLLQKPTLLSKHQQSAPPVSNKGDS 855


>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 934

 Score =  177 bits (450), Expect = 6e-43
 Identities = 94/158 (59%), Positives = 111/158 (70%), Gaps = 3/158 (1%)
 Frame = +1

Query: 1    MNCIRCESGGEMADDMPEDCRELDGVNFSNEDCKS---DQEDIGGFAGIAGCLHKLKSSE 171
            MNC RC++     D+ PE  RE DG    NE C+S   D +DIGGFAGI GCLHKLK SE
Sbjct: 723  MNCNRCQN----YDERPESVREEDGFESKNEGCQSYQMDCDDIGGFAGITGCLHKLKRSE 778

Query: 172  KQVGTPLEEDLGSWGHHFNPTSVPDAILQASAGNEVTFVFSNQVNGKLVPVESMVSPKTD 351
            KQVGT LEEDLGSWGHHF  TSVPDAI QASAG+EVTFVF+NQV+GKLVPVES V     
Sbjct: 779  KQVGTALEEDLGSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQVDGKLVPVESKVRANMQ 838

Query: 352  GVDVDKNQFHQKENVSLKSVLTSRHPQARSWNSSIGDT 465
            GV+ +KNQ  ++  +  K  L S+H Q+    S+ GD+
Sbjct: 839  GVEANKNQSDKRGKLLQKPTLLSKHQQSAPPVSNKGDS 876


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  177 bits (450), Expect = 6e-43
 Identities = 94/158 (59%), Positives = 111/158 (70%), Gaps = 3/158 (1%)
 Frame = +1

Query: 1    MNCIRCESGGEMADDMPEDCRELDGVNFSNEDCKS---DQEDIGGFAGIAGCLHKLKSSE 171
            MNC RC++     D+ PE  RE DG    NE C+S   D +DIGGFAGI GCLHKLK SE
Sbjct: 901  MNCNRCQN----YDERPESVREEDGFESKNEGCQSYQMDCDDIGGFAGITGCLHKLKRSE 956

Query: 172  KQVGTPLEEDLGSWGHHFNPTSVPDAILQASAGNEVTFVFSNQVNGKLVPVESMVSPKTD 351
            KQVGT LEEDLGSWGHHF  TSVPDAI QASAG+EVTFVF+NQV+GKLVPVES V     
Sbjct: 957  KQVGTALEEDLGSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQVDGKLVPVESKVRANMQ 1016

Query: 352  GVDVDKNQFHQKENVSLKSVLTSRHPQARSWNSSIGDT 465
            GV+ +KNQ  ++  +  K  L S+H Q+    S+ GD+
Sbjct: 1017 GVEANKNQSDKRGKLLQKPTLLSKHQQSAPPVSNKGDS 1054


>ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
            communis] gi|223542157|gb|EEF43701.1| DNA repair and
            recombination protein RAD54B, putative [Ricinus communis]
          Length = 940

 Score =  159 bits (402), Expect = 2e-37
 Identities = 91/153 (59%), Positives = 107/153 (69%), Gaps = 2/153 (1%)
 Frame = +1

Query: 1    MNCIRCESGGEMADDMPEDCRELDGVNFSNEDCKSDQE--DIGGFAGIAGCLHKLKSSEK 174
            MNC RC       DD  E   + DG    +  CKSD+E  DIGGFA IAG LH+LKSSEK
Sbjct: 731  MNCDRCLFN----DDGLESIMDEDGS--VSRRCKSDEEVFDIGGFAKIAGILHELKSSEK 784

Query: 175  QVGTPLEEDLGSWGHHFNPTSVPDAILQASAGNEVTFVFSNQVNGKLVPVESMVSPKTDG 354
            QVGTPLEEDLGSWGHHF+ TSVPDAILQASAG+EVTFVF+NQV+GKLVP+ES  SPK   
Sbjct: 785  QVGTPLEEDLGSWGHHFHSTSVPDAILQASAGDEVTFVFTNQVDGKLVPIESTASPKMLE 844

Query: 355  VDVDKNQFHQKENVSLKSVLTSRHPQARSWNSS 453
            +  ++NQ   KEN+S  S L       +S ++S
Sbjct: 845  IKGNQNQHDGKENMSRTSRLFQHQKLLQSISAS 877


>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
            sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
            repair and recombination protein RAD54-like [Cucumis
            sativus]
          Length = 928

 Score =  154 bits (389), Expect = 7e-36
 Identities = 81/144 (56%), Positives = 100/144 (69%), Gaps = 2/144 (1%)
 Frame = +1

Query: 1    MNCIRCESGGEMADDMPEDCRELDGVNFSNEDCKSDQ--EDIGGFAGIAGCLHKLKSSEK 174
            MNC RC++     +DM E+         +N  C+SDQ   DIGGFA +AGCL KLK SE+
Sbjct: 722  MNCSRCQNCYGRPEDMDENLS-------TNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQ 774

Query: 175  QVGTPLEEDLGSWGHHFNPTSVPDAILQASAGNEVTFVFSNQVNGKLVPVESMVSPKTDG 354
            QVG+PLEEDLG+WGHHF+ T+VPD ILQASAG+EVTFVFSNQV+GKLVPVESM SP+   
Sbjct: 775  QVGSPLEEDLGNWGHHFDSTTVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKD 834

Query: 355  VDVDKNQFHQKENVSLKSVLTSRH 426
             + + N     +N   K  L S+H
Sbjct: 835  AEGNGNNSRLNQNSRQKPFLLSQH 858


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