BLASTX nr result

ID: Panax21_contig00031460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031460
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   191   7e-47
emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]   187   1e-45
ref|XP_002518776.1| DNA repair and recombination protein RAD54B,...   182   2e-44
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot...   176   2e-42
ref|XP_003636017.1| DNA repair and recombination protein RAD54-l...   171   6e-41

>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 934

 Score =  191 bits (484), Expect = 7e-47
 Identities = 95/127 (74%), Positives = 101/127 (79%)
 Frame = +2

Query: 2   LTPLQSELYNHFIHSKNVKQVINEEMKQSKILACITALKKLCNHPKLIYDTMRSGSPGTS 181
           L+PLQSELYNHFIHSKNVK+VINEEMKQSKILA ITALKKLCNHPKLIYDT++SG+ GTS
Sbjct: 444 LSPLQSELYNHFIHSKNVKKVINEEMKQSKILAYITALKKLCNHPKLIYDTVKSGNQGTS 503

Query: 182 GFEDCMRFFPPEMFXXXXXXXXXXXXVWVELSGKMHVXXXXXXXXXXXTDDRIVLVSNYT 361
           GFEDCMRFFPPEMF            +WVELSGKMHV           TDDRIVLVSNYT
Sbjct: 504 GFEDCMRFFPPEMFSGRSGAWTGGEGIWVELSGKMHVLARLLAHLRQKTDDRIVLVSNYT 563

Query: 362 QTLDLIA 382
           QTLDL A
Sbjct: 564 QTLDLFA 570


>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
          Length = 985

 Score =  187 bits (474), Expect = 1e-45
 Identities = 96/134 (71%), Positives = 102/134 (76%), Gaps = 7/134 (5%)
 Frame = +2

Query: 2   LTPLQSELYNHFIHSKNVKQVINEEMKQSKILACITALKKLCNHPKLIYDTMRSGSPGTS 181
           L+PLQSELYNHFIHSKNVK+VINEEMKQSKILA ITALKKLCNHPKLIYDT++SG+PGTS
Sbjct: 444 LSPLQSELYNHFIHSKNVKKVINEEMKQSKILAYITALKKLCNHPKLIYDTVKSGNPGTS 503

Query: 182 GFEDCMRFFPPEMF-------XXXXXXXXXXXXVWVELSGKMHVXXXXXXXXXXXTDDRI 340
           GFEDCMRFFPPEMF                   +WVELSGKMHV           TDDRI
Sbjct: 504 GFEDCMRFFPPEMFSGRLLFLCVRSGAWTGGEGIWVELSGKMHVLARLLAHLRQKTDDRI 563

Query: 341 VLVSNYTQTLDLIA 382
           VLVSNYTQTLDL A
Sbjct: 564 VLVSNYTQTLDLFA 577


>ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
           communis] gi|223542157|gb|EEF43701.1| DNA repair and
           recombination protein RAD54B, putative [Ricinus
           communis]
          Length = 940

 Score =  182 bits (462), Expect = 2e-44
 Identities = 91/127 (71%), Positives = 97/127 (76%)
 Frame = +2

Query: 2   LTPLQSELYNHFIHSKNVKQVINEEMKQSKILACITALKKLCNHPKLIYDTMRSGSPGTS 181
           LTPLQSELYNHFIHSKNVK+ I EE K+SKILA ITALKKLCNHPKLIYDT+RSG+PGTS
Sbjct: 452 LTPLQSELYNHFIHSKNVKRAITEETKKSKILAYITALKKLCNHPKLIYDTIRSGTPGTS 511

Query: 182 GFEDCMRFFPPEMFXXXXXXXXXXXXVWVELSGKMHVXXXXXXXXXXXTDDRIVLVSNYT 361
           GFEDC+RFFPP MF             W+ELSGKMHV           TDDRIVLVSNYT
Sbjct: 512 GFEDCIRFFPPGMFSGRSGTWSGGDGSWIELSGKMHVLARLLAHLRQRTDDRIVLVSNYT 571

Query: 362 QTLDLIA 382
           QTLDL A
Sbjct: 572 QTLDLFA 578


>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
           sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
           repair and recombination protein RAD54-like [Cucumis
           sativus]
          Length = 928

 Score =  176 bits (445), Expect = 2e-42
 Identities = 86/127 (67%), Positives = 96/127 (75%)
 Frame = +2

Query: 2   LTPLQSELYNHFIHSKNVKQVINEEMKQSKILACITALKKLCNHPKLIYDTMRSGSPGTS 181
           L+PLQ++LYNHF+ SKNVK+ I EE+KQ+KILA ITALKKLCNHPKLIYDT++SGSPGTS
Sbjct: 443 LSPLQADLYNHFVQSKNVKRAITEELKQAKILAYITALKKLCNHPKLIYDTIKSGSPGTS 502

Query: 182 GFEDCMRFFPPEMFXXXXXXXXXXXXVWVELSGKMHVXXXXXXXXXXXTDDRIVLVSNYT 361
           G E C+RFFPPEMF             WVELSGKMHV           TDDRIVLVSNYT
Sbjct: 503 GLESCIRFFPPEMFSGRSGAWTGGDGAWVELSGKMHVLARLLAHLRQRTDDRIVLVSNYT 562

Query: 362 QTLDLIA 382
           QTLDL A
Sbjct: 563 QTLDLFA 569


>ref|XP_003636017.1| DNA repair and recombination protein RAD54-like protein [Medicago
           truncatula] gi|355501952|gb|AES83155.1| DNA repair and
           recombination protein RAD54-like protein [Medicago
           truncatula]
          Length = 1004

 Score =  171 bits (433), Expect = 6e-41
 Identities = 87/127 (68%), Positives = 93/127 (73%)
 Frame = +2

Query: 2   LTPLQSELYNHFIHSKNVKQVINEEMKQSKILACITALKKLCNHPKLIYDTMRSGSPGTS 181
           LTPLQS+LY HFI SKNVK+ I EE+K SKILA ITALKKLCNHPKLIYDT+RSGSPGTS
Sbjct: 446 LTPLQSDLYKHFIQSKNVKRAITEELKHSKILAYITALKKLCNHPKLIYDTIRSGSPGTS 505

Query: 182 GFEDCMRFFPPEMFXXXXXXXXXXXXVWVELSGKMHVXXXXXXXXXXXTDDRIVLVSNYT 361
           GFEDC+RFFPP M              WVELSGKM V           T+DRIVLVSNYT
Sbjct: 506 GFEDCIRFFPPNMLSGRSGSWTGGDGGWVELSGKMQVLARLLHQLRQRTNDRIVLVSNYT 565

Query: 362 QTLDLIA 382
           QTLDL A
Sbjct: 566 QTLDLFA 572


Top