BLASTX nr result

ID: Panax21_contig00031403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031403
         (1271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera]   372   e-100
ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding prote...   369   e-100
ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486...   345   1e-92
ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding prote...   343   5e-92
ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycin...   343   5e-92

>emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera]
          Length = 403

 Score =  372 bits (955), Expect = e-100
 Identities = 218/381 (57%), Positives = 245/381 (64%), Gaps = 17/381 (4%)
 Frame = +1

Query: 1    HAPRFKAIVNFNGETFESPHHCSTLRQAEHAAAEVALNSLSTRGPSHSLAARILDETGVY 180
            HAPRFKA VNFNGE FESP++C+TLRQAEH+AAEVALNSLS RGPSHSLAARILDETGVY
Sbjct: 29   HAPRFKATVNFNGEIFESPNYCTTLRQAEHSAAEVALNSLSNRGPSHSLAARILDETGVY 88

Query: 181  KNLLQEIAQRVGAPLPLYTTFRSGLGHQPVFTGIVELARIAFHGEPXXXXXXXXXXXXXX 360
            KNLLQEIAQRVGAPLP YTTFRSGLGH PVFTG VELA I F GEP              
Sbjct: 89   KNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGTVELAGITFTGEPAKNKKQAEKNAAMA 148

Query: 361  XWSSLKQLAQQDATSSSEPENNDEQEQIRISRSLMNYCLKQKIATTNSSDAPVPFQKKFP 540
             WSSLKQLA++ A+SSSE ENNDE EQI I+R+L+NY LK+K+A  NS    + F KKFP
Sbjct: 149  AWSSLKQLAKEAASSSSETENNDELEQITIARALLNYRLKEKMAIANSPSGTLSFPKKFP 208

Query: 541  VLYQRPSSPQPPLVTTSKILPLICQKTNPQNIPTSSLMANDSPLPQSQFQVP-------- 696
            +   R  SPQ P V TSKILPLICQKT P+N P S   AND P  Q Q + P        
Sbjct: 209  IQNSRLFSPQLPPVATSKILPLICQKTPPRNRPPSP-TANDDPRQQHQVKNPVPPSQPLA 267

Query: 697  -ELNINRAQKFPAVGAPPYVPYRHYRMPYHIIAQPVTMRTXXXXXXXXXXXXXXXXXXQM 873
             ++   R Q+FPA GA PYVP R +R PYH IA PVT+R                   Q+
Sbjct: 268  LDVRAVRPQRFPAAGAVPYVPIRQFRTPYHGIAPPVTIRN----AVPVFSAPPSGLPPQV 323

Query: 874  MQXXXXXXXXXXXXXQAVAAFTAPPVKKEDPQTV------TASV--LPNKSICQTEEETG 1029
            ++             QAV  F APPV+KEDP  V       AS+  LP KS     EETG
Sbjct: 324  IRAPHMRIAPPVCVRQAVPVFAAPPVRKEDPLVVRKEDPSAASLPSLPTKSPAHV-EETG 382

Query: 1030 SDTRNDQPKSEVFKSLEQLKI 1092
            S T ND  + E  KSLEQLKI
Sbjct: 383  SATANDLQEFEAVKSLEQLKI 403


>ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis
            vinifera]
          Length = 413

 Score =  369 bits (947), Expect = e-100
 Identities = 216/390 (55%), Positives = 246/390 (63%), Gaps = 26/390 (6%)
 Frame = +1

Query: 1    HAPRFKAIVNFNGETFESPHHCSTLRQAEHAAAEVALNSLSTRGPSHSLAARILDETGVY 180
            HAPRFKA VNFNGE FESP++C+TLRQAEH+AAEVALNSLS RGPSHSLAARILDETGVY
Sbjct: 29   HAPRFKATVNFNGEIFESPNYCTTLRQAEHSAAEVALNSLSNRGPSHSLAARILDETGVY 88

Query: 181  KNLLQEIAQRVGAPLPLYTTFRSGLGHQPVFTGIVELARIAFHGEPXXXXXXXXXXXXXX 360
            KNLLQEIAQRVGAPLP YTTFRSGLGH PVFTG VELA I F GEP              
Sbjct: 89   KNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGTVELAGITFTGEPAKNKKQAEKNAAMA 148

Query: 361  XWSSLKQLAQQDATSSSEPENNDEQEQIRISRSLMNYCLKQKIATTNSSDAPVPFQKKFP 540
             WSSLKQLA++ A SSSE ENNDE EQI I+R+L+NY LK+K+A  NS    + F KKFP
Sbjct: 149  AWSSLKQLAKEAANSSSETENNDELEQITIARALLNYRLKEKMAIANSPSGTLSFPKKFP 208

Query: 541  VLYQRPSSPQPPLVTTSKILPLICQKTNPQNIPTS------------------SLMANDS 666
            +   R  SPQ P V TSKILPLICQKT P+N P S                  S  ++++
Sbjct: 209  IQNSRLFSPQLPPVATSKILPLICQKTPPRNRPPSPTANDGSMPSSQPRSRPTSTTSSEN 268

Query: 667  PLPQSQFQVPELNINRAQKFPAVGAPPYVPYRHYRMPYHIIAQPVTMRTXXXXXXXXXXX 846
            P+P SQ    ++   R Q+FPA GA PYVP R +R PYH IA PVT+R            
Sbjct: 269  PVPPSQPLALDVRAVRPQRFPAAGAVPYVPIRQFRTPYHGIAPPVTIRN----AVPVFSA 324

Query: 847  XXXXXXXQMMQXXXXXXXXXXXXXQAVAAFTAPPVKKEDPQTV------TASV--LPNKS 1002
                   Q+++             QAV  F APPV+KEDP  V       AS+  LP KS
Sbjct: 325  PPSGLPPQVIRAPHMRIAPPVCVRQAVPVFAAPPVRKEDPLVVRKEDPSAASLPSLPTKS 384

Query: 1003 ICQTEEETGSDTRNDQPKSEVFKSLEQLKI 1092
                 EETGS T ND  + E  KSLEQLKI
Sbjct: 385  PAHV-EETGSATANDLQEFEAVKSLEQLKI 413


>ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486298|gb|AES67501.1|
            Ribonuclease [Medicago truncatula]
          Length = 408

 Score =  345 bits (886), Expect = 1e-92
 Identities = 201/385 (52%), Positives = 243/385 (63%), Gaps = 21/385 (5%)
 Frame = +1

Query: 1    HAPRFKAIVNFNGETFESPHHCSTLRQAEHAAAEVALNSLSTRGPSHSLAARILDETGVY 180
            HAPRFKA VNFNGE FESPH+CSTLRQAEH+AAEVALNSLS RGPSHSLAA+ILDETGVY
Sbjct: 29   HAPRFKATVNFNGEIFESPHYCSTLRQAEHSAAEVALNSLSHRGPSHSLAAKILDETGVY 88

Query: 181  KNLLQEIAQRVGAPLPLYTTFRSGLGHQPVFTGIVELARIAFHGEPXXXXXXXXXXXXXX 360
            KNLLQEIAQRVGAPLP YTT+RSGLGH PVFTGIVELA I F GEP              
Sbjct: 89   KNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFTGIVELAGITFTGEPAKNKKQAEKNAAMA 148

Query: 361  XWSSLKQLAQQDATSSSEPENNDEQEQIRISRSLMNYCLKQKIATTNSSDAPVPFQKKFP 540
             WSSLKQLA++ A+SS+EPENNDE EQI I+R+L+NY LK+K++ +N  +A +PFQKKF 
Sbjct: 149  AWSSLKQLAKETASSSTEPENNDELEQITIARALLNYRLKEKMSMSN-PNARIPFQKKFQ 207

Query: 541  VLYQRPSSPQPPLVTTSKILPLICQKTNPQNIPTSSLMANDSP---------------LP 675
            +   RP+S Q P  TTSKILPLICQKT P+N P SS   N++P               L 
Sbjct: 208  IQNIRPTSSQSP-ATTSKILPLICQKTGPRNRP-SSATPNENPRSRHPQAAATSDKSILQ 265

Query: 676  QSQFQVPELNINRAQKFPAVGAPPYVPYRHYRMPYHIIAQPVTMRTXXXXXXXXXXXXXX 855
            Q Q    E  + R  +FPA GAPPYVP R  R P H IA  V++RT              
Sbjct: 266  QPQSSAIESRVTRPLRFPAAGAPPYVPIRQMR-PCHGIAPAVSVRT-VIPVFSAPPLPPP 323

Query: 856  XXXXQMMQXXXXXXXXXXXXXQAVAAFTAPPVKKEDPQTVTASVLPNKSICQTEE----- 1020
                Q+++             QAV  F APP++K++P  +   +  + +  + ++     
Sbjct: 324  TSVHQIIRAPPVRIAPPVSIRQAVPVFAAPPLRKDEPAPIQKDLPASSTPVEQDKLPAKI 383

Query: 1021 -ETGSDTRNDQPKSEVFKSLEQLKI 1092
             E      N  P+ E  +SLEQLKI
Sbjct: 384  LEMDKTENNSPPQPETLQSLEQLKI 408


>ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score =  343 bits (880), Expect = 5e-92
 Identities = 208/390 (53%), Positives = 241/390 (61%), Gaps = 26/390 (6%)
 Frame = +1

Query: 1    HAPRFKAIVNFNGETFESPHHCSTLRQAEHAAAEVALNSLSTRGPSHSLAARILDETGVY 180
            HAPRFKA VNFNGE FESPH+CSTLRQAEH+AAEVALNSLS R PSHSLAARILDETGVY
Sbjct: 29   HAPRFKATVNFNGEIFESPHYCSTLRQAEHSAAEVALNSLSNRAPSHSLAARILDETGVY 88

Query: 181  KNLLQEIAQRVGAPLPLYTTFRSGLGHQPVFTGIVELARIAFHGEPXXXXXXXXXXXXXX 360
            KNLLQEIAQRVGAPLP Y TFRSGLGH PVFTG VELA I F GEP              
Sbjct: 89   KNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFTGTVELAGIMFTGEPAKNKKQAEKNAAMA 148

Query: 361  XWSSLKQLAQQDATSSSEPENNDEQEQIRISRSLMNYCLKQKIATTNSSDAPVPFQKKFP 540
             WSSLKQLA++ A SS+EPENNDE EQI I+R+L+NY LK+KI+ +N S+APVPF KKF 
Sbjct: 149  AWSSLKQLAKETARSSTEPENNDELEQITIARALLNYRLKEKISMSN-SNAPVPFPKKFQ 207

Query: 541  VLYQRPSSPQPPLVTTSKILPLICQKTNPQN--------IPTSSLMANDSPLPQSQFQVP 696
            +   RP+SPQPP  TTSKILPLICQK   ++         P SS   ++S +PQ     P
Sbjct: 208  IQNPRPTSPQPPPATTSKILPLICQKGAHRSRHLVAASPAPASS---DNSVMPQLP-ATP 263

Query: 697  ELNINRAQKFPAVGAPPYVPYRHYRMPYHIIAQPVTMRTXXXXXXXXXXXXXXXXXXQMM 876
            +    R  KFPA GA PYVP R  R P   +A PVT+RT                  Q++
Sbjct: 264  DSRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVTIRTAIPVFSPPPPPAAAAVSHQVL 322

Query: 877  QXXXXXXXXXXXXXQAVAAFTAPP------------------VKKEDPQTVTASVLPNKS 1002
            +             QAV  F APP                  V K+D  T++A  L +K 
Sbjct: 323  RAPHVRVAPPVTIRQAVPVFAAPPPPVRKDEPVPIPKDEPVAVPKDDSPTISAPSLEDKL 382

Query: 1003 ICQTEEETGSDTRNDQPKSEVFKSLEQLKI 1092
              +T  ET + T N  P+ E  +SLEQLKI
Sbjct: 383  PTKT-PETETKTENIPPEPETVQSLEQLKI 411


>ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycine max]
            gi|255644888|gb|ACU22944.1| unknown [Glycine max]
          Length = 401

 Score =  343 bits (880), Expect = 5e-92
 Identities = 203/379 (53%), Positives = 238/379 (62%), Gaps = 15/379 (3%)
 Frame = +1

Query: 1    HAPRFKAIVNFNGETFESPHHCSTLRQAEHAAAEVALNSLSTRGPSHSLAARILDETGVY 180
            HAPRFKA VNFNGE FESPH+CSTLRQAEH+AAEVALNSLS R PSHSLAARILDETGVY
Sbjct: 29   HAPRFKATVNFNGEIFESPHYCSTLRQAEHSAAEVALNSLSNRAPSHSLAARILDETGVY 88

Query: 181  KNLLQEIAQRVGAPLPLYTTFRSGLGHQPVFTGIVELARIAFHGEPXXXXXXXXXXXXXX 360
            KNLLQEIAQRVGAPLP Y TFRSGLGH PVFTG VELA I F GEP              
Sbjct: 89   KNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFTGTVELAGIMFTGEPAKNKKQAEKNAAMA 148

Query: 361  XWSSLKQLAQQDATSSSEPENNDEQEQIRISRSLMNYCLKQKIATTNSSDAPVPFQKKFP 540
             WSSLKQLA++ A SS+EPENNDE EQI I+R+L+NY LK+KI+ +N S+APVPF KKF 
Sbjct: 149  AWSSLKQLAKETARSSTEPENNDELEQITIARALLNYRLKEKISMSN-SNAPVPFPKKFQ 207

Query: 541  VLYQRPSSPQPPLVTTSKILPLICQKTNPQN-----IPTSSLMANDSPLPQSQFQVPELN 705
            +   RP+SPQPP   TSKILPLICQK  P++        +    ++S +PQ     PE  
Sbjct: 208  IQNPRPTSPQPPPAATSKILPLICQKAAPRSRHLVGASPARASCDNSAMPQLS-ATPESR 266

Query: 706  INRAQKFPAVGAPPYVPYRHYRMPYHIIAQPVTMRTXXXXXXXXXXXXXXXXXXQMMQXX 885
              R  KFPA GA PYVP R  R P   +A PVT+RT                  Q+++  
Sbjct: 267  GIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVTIRT--AIPVFSPPPAAAAVSHQVLRAP 323

Query: 886  XXXXXXXXXXXQAVAAFTAP----------PVKKEDPQTVTASVLPNKSICQTEEETGSD 1035
                       QAV  F  P          P+ K++P T++A    +K   +T  E  + 
Sbjct: 324  HVRVAPPVTIRQAVPVFATPPPPIRKDEPVPIPKDEPPTISAPSPEDKLPAKT-PEAETK 382

Query: 1036 TRNDQPKSEVFKSLEQLKI 1092
            T N  PK ++ KSLEQLKI
Sbjct: 383  TENIPPKPDMVKSLEQLKI 401


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