BLASTX nr result

ID: Panax21_contig00031374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031374
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32591.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [V...   115   5e-24
ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatu...   111   5e-23
gb|AFK37660.1| unknown [Lotus japonicus]                              111   7e-23
gb|AFK36091.1| unknown [Lotus japonicus]                              111   7e-23

>emb|CBI32591.3| unnamed protein product [Vitis vinifera]
          Length = 136

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/75 (70%), Positives = 61/75 (81%)
 Frame = -3

Query: 355 RVIPEISLFVKGAPRFHPGNYVGIGKDHTLFALKEGRVKFERHKLSGRKWVHIEPKEGHV 176
           RVIP   +  +   RFHPGNYVGIGKDHTL+ALKEG VKFE+HKLSGRKWVH+EPK+GHV
Sbjct: 60  RVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALKEGCVKFEKHKLSGRKWVHVEPKDGHV 119

Query: 175 LHPVYSNVATLILNT 131
           LHPVY++ A   L T
Sbjct: 120 LHPVYADAAAPRLKT 134


>ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [Vitis vinifera]
          Length = 146

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/75 (70%), Positives = 61/75 (81%)
 Frame = -3

Query: 355 RVIPEISLFVKGAPRFHPGNYVGIGKDHTLFALKEGRVKFERHKLSGRKWVHIEPKEGHV 176
           RVIP   +  +   RFHPGNYVGIGKDHTL+ALKEG VKFE+HKLSGRKWVH+EPK+GHV
Sbjct: 70  RVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALKEGCVKFEKHKLSGRKWVHVEPKDGHV 129

Query: 175 LHPVYSNVATLILNT 131
           LHPVY++ A   L T
Sbjct: 130 LHPVYADAAAPRLKT 144


>ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatula]
           gi|217071060|gb|ACJ83890.1| unknown [Medicago
           truncatula] gi|355487511|gb|AES68714.1| 50S ribosomal
           protein L27 [Medicago truncatula]
           gi|388495594|gb|AFK35863.1| unknown [Medicago
           truncatula] gi|388500166|gb|AFK38149.1| unknown
           [Medicago truncatula]
          Length = 148

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/69 (72%), Positives = 60/69 (86%)
 Frame = -3

Query: 355 RVIPEISLFVKGAPRFHPGNYVGIGKDHTLFALKEGRVKFERHKLSGRKWVHIEPKEGHV 176
           RVIP   +  +   RFHPGNYVG+GKDHTLFALKEG VKFER+KL+GRKWVH+EPKEGHV
Sbjct: 70  RVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGWVKFERNKLTGRKWVHVEPKEGHV 129

Query: 175 LHPVYSNVA 149
           LHPV+++V+
Sbjct: 130 LHPVFADVS 138


>gb|AFK37660.1| unknown [Lotus japonicus]
          Length = 146

 Score =  111 bits (277), Expect = 7e-23
 Identities = 50/69 (72%), Positives = 58/69 (84%)
 Frame = -3

Query: 355 RVIPEISLFVKGAPRFHPGNYVGIGKDHTLFALKEGRVKFERHKLSGRKWVHIEPKEGHV 176
           RVIP   +  +   RFHPGNYVGIGKDHTLFALK+G VKFER+KL+GRKWVH+EPKEGHV
Sbjct: 70  RVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKQGLVKFERNKLTGRKWVHVEPKEGHV 129

Query: 175 LHPVYSNVA 149
           LHPVY + +
Sbjct: 130 LHPVYESAS 138


>gb|AFK36091.1| unknown [Lotus japonicus]
          Length = 181

 Score =  111 bits (277), Expect = 7e-23
 Identities = 50/69 (72%), Positives = 58/69 (84%)
 Frame = -3

Query: 355 RVIPEISLFVKGAPRFHPGNYVGIGKDHTLFALKEGRVKFERHKLSGRKWVHIEPKEGHV 176
           RVIP   +  +   RFHPGNYVGIGKDHTLFALK+G VKFER+KL+GRKWVH+EPKEGHV
Sbjct: 105 RVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKQGLVKFERNKLTGRKWVHVEPKEGHV 164

Query: 175 LHPVYSNVA 149
           LHPVY + +
Sbjct: 165 LHPVYESAS 173


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