BLASTX nr result

ID: Panax21_contig00031357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031357
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vi...   169   2e-40
ref|XP_002519531.1| Auxin response factor, putative [Ricinus com...   160   1e-37
gb|ACI13681.1| putative auxin response factor ARF16 [Malus x dom...   160   1e-37
ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cu...   152   3e-35
ref|XP_002326354.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32

>ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 701

 Score =  169 bits (428), Expect = 2e-40
 Identities = 90/148 (60%), Positives = 97/148 (65%)
 Frame = +3

Query: 3   CSGVTVSPIPTGNSSSEGNADTMANIXXXXXXXXXXXXXFAFNQHEIPERPSCEGLHLYK 182
           CSG TVSP+ TGNSSSEGN D MAN               A +QH +PE  SCEG   YK
Sbjct: 549 CSGDTVSPVITGNSSSEGNQDKMANFSDGSGS--------ALHQHGLPEHSSCEGYQTYK 600

Query: 183 GNQKESETNLETGHCKVIMESEDVGRTLDXXXXXXXXXXXRKLANMFGIESSEILNHVLY 362
            N +E+E NLETGHCKV MESEDVGRTLD            KLA MF IE SE+ NHVLY
Sbjct: 601 VNHRETEPNLETGHCKVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIEDSEMRNHVLY 660

Query: 363 RDLTGTVNQIGDEPFSDFIKTARRLTIL 446
           RD TG V  IGDEPFSDF KTA+RLTIL
Sbjct: 661 RDATGAVKHIGDEPFSDFTKTAKRLTIL 688


>ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
           gi|223541394|gb|EEF42945.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 702

 Score =  160 bits (405), Expect = 1e-37
 Identities = 86/147 (58%), Positives = 100/147 (68%)
 Frame = +3

Query: 6   SGVTVSPIPTGNSSSEGNADTMANIXXXXXXXXXXXXXFAFNQHEIPERPSCEGLHLYKG 185
           SG TVSP+ TGNSSSEGN D +AN               A +Q  +PE  S EG    KG
Sbjct: 554 SGDTVSPVLTGNSSSEGNLDKIANFSDGSGS--------ALHQQGLPEHSSYEGFQWCKG 605

Query: 186 NQKESETNLETGHCKVIMESEDVGRTLDXXXXXXXXXXXRKLANMFGIESSEILNHVLYR 365
           N++E+E +LETGHCKV MESEDVGRTLD           RKLA+MFGIE+SE LN+VLYR
Sbjct: 606 NRQETEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYRKLADMFGIENSETLNNVLYR 665

Query: 366 DLTGTVNQIGDEPFSDFIKTARRLTIL 446
           D+ G V  IGDEPFSDF+KTARRLTI+
Sbjct: 666 DIAGIVKHIGDEPFSDFMKTARRLTII 692


>gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  160 bits (404), Expect = 1e-37
 Identities = 89/149 (59%), Positives = 99/149 (66%), Gaps = 2/149 (1%)
 Frame = +3

Query: 6   SGVTVSPIPTGNSSSEGNADTMANIXXXXXXXXXXXXXFAFNQHEIPERPSCEGLHLYKG 185
           SG TVSP+ TGNSSS+GNAD MAN                  Q  I ER SCEG   YK 
Sbjct: 553 SGDTVSPVLTGNSSSDGNADKMANHSDNSGSAL---------QQSIQERSSCEGFQWYKD 603

Query: 186 NQKESETNLETGHCKVIMESEDVGRTLDXXXXXXXXXXXRKLANMFGIESSEILNHVLYR 365
           N+ E+E +LETGHCKV MESEDVGRTLD           RKLA+MFGI++SE LNHVLYR
Sbjct: 604 NRHETEPHLETGHCKVFMESEDVGRTLDLSLLGSYDELYRKLADMFGIDNSETLNHVLYR 663

Query: 366 DLTGTVNQIGDEPF--SDFIKTARRLTIL 446
           D TG V  +GDEPF  SDF+KTARRLTIL
Sbjct: 664 DGTGAVKHVGDEPFSCSDFMKTARRLTIL 692


>ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 698

 Score =  152 bits (384), Expect = 3e-35
 Identities = 81/147 (55%), Positives = 95/147 (64%)
 Frame = +3

Query: 6   SGVTVSPIPTGNSSSEGNADTMANIXXXXXXXXXXXXXFAFNQHEIPERPSCEGLHLYKG 185
           SG TVSP+ TGNSSS+GN D M N+              A +Q  +PE  + E    YK 
Sbjct: 550 SGDTVSPVGTGNSSSDGNGDKMTNLSDGSGS--------ALHQQGLPEGSAGENFQWYKD 601

Query: 186 NQKESETNLETGHCKVIMESEDVGRTLDXXXXXXXXXXXRKLANMFGIESSEILNHVLYR 365
           N +E + NL+ GHCKV MESEDVGRTLD           RKL NMFGI++SE LNHVLYR
Sbjct: 602 NCQEIDPNLDIGHCKVFMESEDVGRTLDLSSLGSYEELYRKLGNMFGIDNSETLNHVLYR 661

Query: 366 DLTGTVNQIGDEPFSDFIKTARRLTIL 446
           D++G V  +GDE FSDFIKTARRLTIL
Sbjct: 662 DVSGAVKHVGDEQFSDFIKTARRLTIL 688


>ref|XP_002326354.1| predicted protein [Populus trichocarpa] gi|222833547|gb|EEE72024.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score =  142 bits (359), Expect = 2e-32
 Identities = 76/148 (51%), Positives = 91/148 (61%)
 Frame = +3

Query: 3   CSGVTVSPIPTGNSSSEGNADTMANIXXXXXXXXXXXXXFAFNQHEIPERPSCEGLHLYK 182
           C G   SP+ TGNSSSEGN D MAN                 ++  +PE  SCE L   K
Sbjct: 556 CPGNAASPVLTGNSSSEGNLDKMANFSDGSVS--------TLHRRGLPECSSCEELQWNK 607

Query: 183 GNQKESETNLETGHCKVIMESEDVGRTLDXXXXXXXXXXXRKLANMFGIESSEILNHVLY 362
              ++SE +LETGHCKV M+SEDVGRTLD           RKLANMFG+ +SE  ++VLY
Sbjct: 608 DKHQKSEPSLETGHCKVFMDSEDVGRTLDLSLLGSYEELYRKLANMFGLRNSEKFSNVLY 667

Query: 363 RDLTGTVNQIGDEPFSDFIKTARRLTIL 446
           RD+ G    IG+EPFSDF KTARRLTI+
Sbjct: 668 RDINGITKHIGEEPFSDFFKTARRLTIV 695


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