BLASTX nr result
ID: Panax21_contig00031349
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00031349 (403 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAA32827.1| 98b [Daucus carota] 134 6e-30 ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobilit... 115 3e-24 ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-... 115 3e-24 ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [S... 113 1e-23 ref|XP_002303636.1| high mobility group family [Populus trichoca... 113 2e-23 >dbj|BAA32827.1| 98b [Daucus carota] Length = 502 Score = 134 bits (338), Expect = 6e-30 Identities = 74/134 (55%), Positives = 78/134 (58%) Frame = +1 Query: 1 KEQYAQEMEVYKHKKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180 K QY Q+MEVYK KKD Sbjct: 345 KNQYLQQMEVYKKKKDEEAASLQKEEEELSKIQKQEAMQLLKKKEKTENLIKKTKEERQK 404 Query: 181 XXXAEKNTVDPNKPKRPASSFLLFSKEARKTLVEERPGINNSTLNALISVKWKEISQEEK 360 EK VDPNKPKRPASSFLLFSKEARKT+ EERPGINNSTLNALISVKWKEIS EEK Sbjct: 405 KQKGEKKIVDPNKPKRPASSFLLFSKEARKTISEERPGINNSTLNALISVKWKEISHEEK 464 Query: 361 QSWNQKAAGAMDAY 402 Q WN+KAAGAM+AY Sbjct: 465 QLWNEKAAGAMEAY 478 >ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein 13-like [Cucumis sativus] Length = 500 Score = 115 bits (289), Expect = 3e-24 Identities = 60/134 (44%), Positives = 79/134 (58%) Frame = +1 Query: 1 KEQYAQEMEVYKHKKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180 KE+Y QEME+Y+ KK+ Sbjct: 343 KEKYMQEMEIYEQKKEEEAAILKKEEEEQMKVQKHEALLLLKKKXKTETIIKKSKEERQK 402 Query: 181 XXXAEKNTVDPNKPKRPASSFLLFSKEARKTLVEERPGINNSTLNALISVKWKEISQEEK 360 KN VDPNKPK+PASS++LFSKEARK+++EE+PG++NST+NALISVKWKE+S+EE+ Sbjct: 403 KKKEGKNPVDPNKPKKPASSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEER 462 Query: 361 QSWNQKAAGAMDAY 402 + WN KAA AM+ Y Sbjct: 463 KIWNDKAAEAMEGY 476 >ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-like [Cucumis sativus] Length = 500 Score = 115 bits (289), Expect = 3e-24 Identities = 59/134 (44%), Positives = 78/134 (58%) Frame = +1 Query: 1 KEQYAQEMEVYKHKKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180 KE+Y QEME+Y+ KK+ Sbjct: 343 KEKYMQEMEIYEQKKEEEAAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQK 402 Query: 181 XXXAEKNTVDPNKPKRPASSFLLFSKEARKTLVEERPGINNSTLNALISVKWKEISQEEK 360 KN VDPNKPK+PASS++LFSKEARK+++EE+PG++NST+NALISVKWKE+S+EE+ Sbjct: 403 KKKEGKNPVDPNKPKKPASSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEER 462 Query: 361 QSWNQKAAGAMDAY 402 + WN KAA AM+ Y Sbjct: 463 KIWNDKAAEAMEGY 476 >ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor] gi|241933466|gb|EES06611.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor] Length = 488 Score = 113 bits (283), Expect = 1e-23 Identities = 54/70 (77%), Positives = 62/70 (88%) Frame = +1 Query: 193 EKNTVDPNKPKRPASSFLLFSKEARKTLVEERPGINNSTLNALISVKWKEISQEEKQSWN 372 ++ DPN+PKRPASSFLLFSKEARK L+EERPGINNS+LNALISVKWKE+S EE+Q+WN Sbjct: 404 KQENADPNRPKRPASSFLLFSKEARKQLLEERPGINNSSLNALISVKWKELSGEERQAWN 463 Query: 373 QKAAGAMDAY 402 KAA AM AY Sbjct: 464 AKAAPAMAAY 473 >ref|XP_002303636.1| high mobility group family [Populus trichocarpa] gi|222841068|gb|EEE78615.1| high mobility group family [Populus trichocarpa] Length = 480 Score = 113 bits (282), Expect = 2e-23 Identities = 51/70 (72%), Positives = 63/70 (90%) Frame = +1 Query: 193 EKNTVDPNKPKRPASSFLLFSKEARKTLVEERPGINNSTLNALISVKWKEISQEEKQSWN 372 ++ VDPNKPK+PASSFLLFSKE RK+L++ERPGINNSTL A+ISVKWKE+++EE+Q WN Sbjct: 389 QQQNVDPNKPKKPASSFLLFSKETRKSLMDERPGINNSTLTAMISVKWKELNEEERQIWN 448 Query: 373 QKAAGAMDAY 402 KAA AM+AY Sbjct: 449 SKAAEAMEAY 458