BLASTX nr result

ID: Panax21_contig00031335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031335
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283115.1| PREDICTED: uncharacterized protein LOC100267...   192   3e-47
ref|XP_002326610.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002865852.1| hypothetical protein ARALYDRAFT_495202 [Arab...   182   3e-44
gb|AFJ66205.1| hypothetical protein 34G24.3 [Capsella rubella]        181   7e-44
ref|XP_002303489.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43

>ref|XP_002283115.1| PREDICTED: uncharacterized protein LOC100267539 [Vitis vinifera]
          Length = 794

 Score =  192 bits (487), Expect = 3e-47
 Identities = 97/136 (71%), Positives = 105/136 (77%), Gaps = 2/136 (1%)
 Frame = -1

Query: 403 IPKPLLSENGLTNTHSGTDKDYXXXXXXXXXXXXXXXRWDPPLGESNND-GAGSDGTGTR 227
           + KPL+SENG+TNT SGTDKDY               RWDPP    N   G  ++GTG R
Sbjct: 82  LQKPLVSENGVTNTQSGTDKDYSGGEEETTSRRRRRSRWDPPSDSGNQTAGEAAEGTGAR 141

Query: 226 KRKSRWADDT-KPVIQLPDFMKDFTAGIEFDPEIQALNSRLLEISRKLQSGLPLDDRPEG 50
           KRKSRWADD  KP+IQLPDFMKDFT GIEFDPEIQALNSRLLEISR LQSGLPLDDRPEG
Sbjct: 142 KRKSRWADDEPKPLIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRMLQSGLPLDDRPEG 201

Query: 49  ARSPSPEPVYDNLGIR 2
           ARSPSPEP+YDN+GIR
Sbjct: 202 ARSPSPEPIYDNMGIR 217


>ref|XP_002326610.1| predicted protein [Populus trichocarpa] gi|222833932|gb|EEE72409.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  186 bits (472), Expect = 2e-45
 Identities = 98/144 (68%), Positives = 106/144 (73%), Gaps = 10/144 (6%)
 Frame = -1

Query: 403 IPKPLLSENGLTNTHSGTDKDYXXXXXXXXXXXXXXXRWDPPL---------GESNNDGA 251
           IPKPLLSENG+ NT+SG D+DY               RWDPP          G S+N   
Sbjct: 4   IPKPLLSENGVANTNSG-DRDYSGGEEETTSRRRRRSRWDPPADSGTDGGGGGSSSNTNN 62

Query: 250 GSDGTGTRKRKSRWADDT-KPVIQLPDFMKDFTAGIEFDPEIQALNSRLLEISRKLQSGL 74
              G+GTRKRKSRWADD  KPVIQLPDFMKDFT GIEFDPEIQALN+RLLEISR LQSGL
Sbjct: 63  NDSGSGTRKRKSRWADDEPKPVIQLPDFMKDFTGGIEFDPEIQALNARLLEISRMLQSGL 122

Query: 73  PLDDRPEGARSPSPEPVYDNLGIR 2
           PLDDRPEGARSPSPEP+YDN+GIR
Sbjct: 123 PLDDRPEGARSPSPEPIYDNMGIR 146


>ref|XP_002865852.1| hypothetical protein ARALYDRAFT_495202 [Arabidopsis lyrata subsp.
           lyrata] gi|297311687|gb|EFH42111.1| hypothetical protein
           ARALYDRAFT_495202 [Arabidopsis lyrata subsp. lyrata]
          Length = 798

 Score =  182 bits (461), Expect = 3e-44
 Identities = 95/137 (69%), Positives = 102/137 (74%), Gaps = 5/137 (3%)
 Frame = -1

Query: 397 KPLLSENGLTNTHSGTDKDYXXXXXXXXXXXXXXXRWDPPLGESNN----DGAGSDGTGT 230
           +PLLSENG++ T SG DKD                RWDPP  ES N    +G+   GTGT
Sbjct: 59  RPLLSENGVSKTLSGNDKDQSGGEEETTSRRKRRSRWDPPPSESGNNPSAEGSTDSGTGT 118

Query: 229 RKRKSRWADDT-KPVIQLPDFMKDFTAGIEFDPEIQALNSRLLEISRKLQSGLPLDDRPE 53
           RKRKSRWADD  KP IQLPDFMKDFT GIEFDPEIQALNSRLLEISR LQSG+PLDDRPE
Sbjct: 119 RKRKSRWADDEPKPHIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRMLQSGMPLDDRPE 178

Query: 52  GARSPSPEPVYDNLGIR 2
           G RSPSPEPVYDN+GIR
Sbjct: 179 GQRSPSPEPVYDNMGIR 195


>gb|AFJ66205.1| hypothetical protein 34G24.3 [Capsella rubella]
          Length = 806

 Score =  181 bits (458), Expect = 7e-44
 Identities = 94/137 (68%), Positives = 101/137 (73%), Gaps = 5/137 (3%)
 Frame = -1

Query: 397 KPLLSENGLTNTHSGTDKDYXXXXXXXXXXXXXXXRWDPPLGESNN----DGAGSDGTGT 230
           +PL+SENG++ T SG DKD                RWDPP  ES N    +G    GTGT
Sbjct: 63  RPLISENGVSKTLSGNDKDQSGGEEETTSRRKRRSRWDPPPSESINNPSAEGGNDSGTGT 122

Query: 229 RKRKSRWADDT-KPVIQLPDFMKDFTAGIEFDPEIQALNSRLLEISRKLQSGLPLDDRPE 53
           RKRKSRWADD  KP IQLPDFMKDFT GIEFDPEIQALNSRLLEISR LQSG+PLDDRPE
Sbjct: 123 RKRKSRWADDEPKPQIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRMLQSGMPLDDRPE 182

Query: 52  GARSPSPEPVYDNLGIR 2
           G RSPSPEPVYDN+GIR
Sbjct: 183 GQRSPSPEPVYDNMGIR 199


>ref|XP_002303489.1| predicted protein [Populus trichocarpa] gi|222840921|gb|EEE78468.1|
           predicted protein [Populus trichocarpa]
          Length = 794

 Score =  179 bits (455), Expect = 2e-43
 Identities = 97/140 (69%), Positives = 105/140 (75%), Gaps = 6/140 (4%)
 Frame = -1

Query: 403 IPKPLLSENGLTNTHSGTDKDYXXXXXXXXXXXXXXXRWDPPL-----GESNNDGAGSDG 239
           IPK LLSENG+ NT+SG D+D                RWDPP      G +NND     G
Sbjct: 89  IPKSLLSENGVANTNSG-DRDCSGGEEETTSRRRRRSRWDPPADAGADGSNNNDS----G 143

Query: 238 TGTRKRKSRWADDT-KPVIQLPDFMKDFTAGIEFDPEIQALNSRLLEISRKLQSGLPLDD 62
           +GTRKRKSRWADD  KPVIQLPDFMKDFT GIEFDPEIQALN+RLLEISR LQSGLPLDD
Sbjct: 144 SGTRKRKSRWADDEPKPVIQLPDFMKDFTGGIEFDPEIQALNARLLEISRMLQSGLPLDD 203

Query: 61  RPEGARSPSPEPVYDNLGIR 2
           RPEGARSPSPEP+YDN+GIR
Sbjct: 204 RPEGARSPSPEPIYDNMGIR 223


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