BLASTX nr result

ID: Panax21_contig00031330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031330
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [...   174   2e-41
gb|ADL36832.1| TCP domain class transcription factor [Malus x do...   164   1e-38
ref|XP_002512905.1| transcription factor, putative [Ricinus comm...   159   6e-37
ref|XP_002298640.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
gb|ACU21051.1| unknown [Glycine max]                                  146   4e-33

>ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [Vitis vinifera]
          Length = 296

 Score =  174 bits (440), Expect = 2e-41
 Identities = 98/153 (64%), Positives = 105/153 (68%), Gaps = 4/153 (2%)
 Frame = +1

Query: 1   SSRTSWPTVGGNLGRPHMXXXXXXXXXXXXXXXXXXXYGFQPSSSGPSTTNLGHESSNYL 180
           SSRTSW  VG NLGRPH+                   +GFQ SSSGPSTTNLG+ESSNYL
Sbjct: 154 SSRTSWAMVGANLGRPHVATGLWPPVSG---------FGFQ-SSSGPSTTNLGNESSNYL 203

Query: 181 QKIGFPGFDLPATNLGHMSFASILGASNQQLPGLELGLSQDGHIGVLSSQALSQIYQQMG 360
           QKI FPGFDLPATNLG MSF SILG SNQQLPGLELGLSQDGHIGVL+SQALSQIYQQMG
Sbjct: 204 QKIAFPGFDLPATNLGPMSFTSILGGSNQQLPGLELGLSQDGHIGVLNSQALSQIYQQMG 263

Query: 361 HARMXXXXXXXXXXXXXXS----SKDEPQGSGQ 447
            AR+                   +KD+ QGSGQ
Sbjct: 264 QARVHQQQQHQHQHQHQHQQQPPAKDDSQGSGQ 296


>gb|ADL36832.1| TCP domain class transcription factor [Malus x domestica]
          Length = 315

 Score =  164 bits (415), Expect = 1e-38
 Identities = 95/152 (62%), Positives = 101/152 (66%), Gaps = 5/152 (3%)
 Frame = +1

Query: 7   RTSWPTVGGNLGRPHMXXXXXXXXXXXXXXXXXXXYGFQPSSSGPS-TTNLGHESSNYLQ 183
           RTSW  VGGNLGRPH+                   +GFQ SS  PS TTNLG ESSNYLQ
Sbjct: 172 RTSWAMVGGNLGRPHVAGVGGLWPPVSS-------FGFQSSSGPPSATTNLGTESSNYLQ 224

Query: 184 KIGFPGFDLPATNLGHMSFASILGASN----QQLPGLELGLSQDGHIGVLSSQALSQIYQ 351
           KIGFPGFDLP +NLG MSF SILG  N    QQLPGLELGLSQDGHIGVL+SQALSQIYQ
Sbjct: 225 KIGFPGFDLPVSNLGPMSFTSILGGGNQQQQQQLPGLELGLSQDGHIGVLNSQALSQIYQ 284

Query: 352 QMGHARMXXXXXXXXXXXXXXSSKDEPQGSGQ 447
           QMGHAR+               SKD+ QGSGQ
Sbjct: 285 QMGHARV-HQQPPQHHHQQQPPSKDDSQGSGQ 315


>ref|XP_002512905.1| transcription factor, putative [Ricinus communis]
           gi|223547916|gb|EEF49408.1| transcription factor,
           putative [Ricinus communis]
          Length = 320

 Score =  159 bits (401), Expect = 6e-37
 Identities = 90/152 (59%), Positives = 102/152 (67%), Gaps = 3/152 (1%)
 Frame = +1

Query: 1   SSRTSWPTVGGNLGRPHMXXXXXXXXXXXXXXXXXXXYGFQPSSS--GPSTTNLGHESSN 174
           +SRTSW  VGGNLGRPH                    +GFQ SS+  GP T+NLG+ESS+
Sbjct: 179 NSRTSWAMVGGNLGRPH-------HVATTGLWPPVGGFGFQSSSTTTGPVTSNLGNESSS 231

Query: 175 YLQKIGFPGFDLPATNLGHMSFASIL-GASNQQLPGLELGLSQDGHIGVLSSQALSQIYQ 351
           YLQKIGFPGFDLP  N+G MSF SIL G SNQQ+PGLELGLSQDGHIGVL+SQA SQIYQ
Sbjct: 232 YLQKIGFPGFDLPGNNMGPMSFTSILGGTSNQQIPGLELGLSQDGHIGVLNSQAFSQIYQ 291

Query: 352 QMGHARMXXXXXXXXXXXXXXSSKDEPQGSGQ 447
           QMG AR+               +KD+ QGSGQ
Sbjct: 292 QMGQARV---QHQHQHQHQQNPAKDDSQGSGQ 320


>ref|XP_002298640.1| predicted protein [Populus trichocarpa] gi|222845898|gb|EEE83445.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  157 bits (398), Expect = 1e-36
 Identities = 90/156 (57%), Positives = 100/156 (64%), Gaps = 7/156 (4%)
 Frame = +1

Query: 1   SSRTSWPTVGGNLGRPHMXXXXXXXXXXXXXXXXXXXYGFQPSSS--GPSTTNLGHES-- 168
           SSR SW  +GGNLGRPH                    YGFQ SS+  GPSTTN+G E+  
Sbjct: 177 SSRASWAMLGGNLGRPH-------HVTTAGLWPPVGGYGFQSSSNSTGPSTTNIGTEAAA 229

Query: 169 ---SNYLQKIGFPGFDLPATNLGHMSFASILGASNQQLPGLELGLSQDGHIGVLSSQALS 339
              S+YLQK+GFPGFDLP  N+G MSF SILG   QQLPGLELGLSQDGHIGVLS QAL+
Sbjct: 230 AGGSSYLQKLGFPGFDLPGNNMGPMSFTSILGGGTQQLPGLELGLSQDGHIGVLSPQALN 289

Query: 340 QIYQQMGHARMXXXXXXXXXXXXXXSSKDEPQGSGQ 447
           QIYQQMGHAR+               SKD+ QGSGQ
Sbjct: 290 QIYQQMGHARV-----HQQQHQQQNPSKDDSQGSGQ 320


>gb|ACU21051.1| unknown [Glycine max]
          Length = 329

 Score =  146 bits (368), Expect = 4e-33
 Identities = 87/161 (54%), Positives = 98/161 (60%), Gaps = 13/161 (8%)
 Frame = +1

Query: 1   SSRTSWPTVGGNLGRPHMXXXXXXXXXXXXXXXXXXXYGFQPS------SSGPSTTNLGH 162
           SSR SW  VGGNLGRPH+                   +GFQ +      SSGPS   L  
Sbjct: 172 SSRASWQMVGGNLGRPHLGVATTGLWPPHVSG-----FGFQTATTTTTTSSGPSNATLAT 226

Query: 163 ESSNYLQKIGFPGFDLP--ATNLGHMSFASILG-ASNQQLPGLELGLSQDGHIGVLSSQA 333
           ESSNYLQKI FPGFDLP  ATN+GHMSF SILG A +QQ+PGLELGLSQDGHIGVL+ QA
Sbjct: 227 ESSNYLQKIAFPGFDLPTSATNMGHMSFTSILGGAGSQQMPGLELGLSQDGHIGVLNPQA 286

Query: 334 LSQIYQQMGH----ARMXXXXXXXXXXXXXXSSKDEPQGSG 444
           L+QIYQQM H     R+               +KD+ QGSG
Sbjct: 287 LNQIYQQMNHQAQAGRVHQQHQHQQQQHQQTPAKDDSQGSG 327


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