BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031320
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     109   2e-22
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   101   7e-20
gb|AAV31299.1| putative polyprotein [Oryza sativa Japonica Group...    97   1e-18
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              97   2e-18
gb|ABA93786.1| retrotransposon protein, putative, Ty3-gypsy subc...    97   2e-18

>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/112 (48%), Positives = 73/112 (65%), Gaps = 1/112 (0%)
 Frame = -3

Query: 346  FKEIYNDEGLKVNLDLLEEVREIALIKLAAYQRRVAKHYNKGVKLRRFEVGDFVLREVEA 167
            F  + N+EGLK +LDL+EE R+ A + LA YQ R+ + YN  V  R   VGD VLR+  A
Sbjct: 1195 FNPVENEEGLKASLDLVEESRDTARLNLAVYQNRMRRAYNHRVHKRDLRVGDLVLRKSTA 1254

Query: 166  STPQNL-GKLMPNWEGPYEVVEVPKPGTYRLKALDGSEIKNTWHAGRLRKYF 14
            +   N+ GK+  NWEGPY+VVE  +PGTYRL  ++G  + + W+   LRKYF
Sbjct: 1255 TNKGNIHGKMTTNWEGPYKVVEEMRPGTYRLTDMEGVPLMSHWNTDNLRKYF 1306


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/107 (47%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = -3

Query: 331  NDEGLKVNLDLLEEVREIALIKLAAYQRRVAKHYNKGVKLRRFEVGDFVLREV-EASTPQ 155
            ND+ L  NLD LEE R+ AL+++  YQ+  AK YNK VK R F  GD VLR+V E +  Q
Sbjct: 1680 NDQMLLDNLDTLEEQRDQALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQ 1739

Query: 154  NLGKLMPNWEGPYEVVEVPKPGTYRLKALDGSEIKNTWHAGRLRKYF 14
            + GKL  +WEGPY + +V KPG Y L  +DG+ I  +W++  L++Y+
Sbjct: 1740 DAGKLGAHWEGPYLISKVVKPGVYELLTMDGTPIPRSWNSANLKRYY 1786


>gb|AAV31299.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|54291738|gb|AAV32107.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1857

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/111 (42%), Positives = 75/111 (67%)
 Frame = -3

Query: 346  FKEIYNDEGLKVNLDLLEEVREIALIKLAAYQRRVAKHYNKGVKLRRFEVGDFVLREVEA 167
            F+E   +E    +++ LEE RE+ALI+LA Y + + +++N+ V+ R F VGD VLR ++ 
Sbjct: 1748 FREERYEEDRVDDINRLEEAREVALIQLARYLQGLRRYHNRNVRSRAFLVGDLVLRRIQ- 1806

Query: 166  STPQNLGKLMPNWEGPYEVVEVPKPGTYRLKALDGSEIKNTWHAGRLRKYF 14
             T Q+  KL P WEGP+ + EV +PG+YRLK  DG+ + N+W+   LR+++
Sbjct: 1807 -TTQDRHKLSPLWEGPFIIAEVTRPGSYRLKREDGTLVSNSWNIEHLRRFY 1856


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
 Frame = -3

Query: 331  NDEGLKVNLDLLEEVREIALIKLAAYQRRVAKHYNKGVKLRRFEVGDFVLREVEASTPQ- 155
            ND  +   LD LEE+R  AL ++  YQ   AKHYN+ V  R F+VGD VLR+V  +T + 
Sbjct: 1731 NDRMMLDRLDDLEEIRNAALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEI 1790

Query: 154  NLGKLMPNWEGPYEVVEVPKPGTYRLKALDGSEIKNTWHAGRLRKYF 14
            N GKL  NWEG Y+V ++ +PG Y L  + G+ +  TW++  L++Y+
Sbjct: 1791 NAGKLGANWEGSYQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1837


>gb|ABA93786.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1498

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/111 (43%), Positives = 74/111 (66%)
 Frame = -3

Query: 346  FKEIYNDEGLKVNLDLLEEVREIALIKLAAYQRRVAKHYNKGVKLRRFEVGDFVLREVEA 167
            F E   +EG   +++ LEE RE ALI+   YQ+ + +++N+ V+ R F VGD VLR+++ 
Sbjct: 1389 FNEEGYEEGRVDDINRLEEAREAALIQSTRYQQGLRRYHNRNVRSRAFLVGDLVLRKIQ- 1447

Query: 166  STPQNLGKLMPNWEGPYEVVEVPKPGTYRLKALDGSEIKNTWHAGRLRKYF 14
             T Q+  KL P WEGP+ + EV +PG+YRLK  DG+ I N+W+   LR+++
Sbjct: 1448 -TTQDRHKLSPLWEGPFIIAEVTRPGSYRLKHEDGTIINNSWNIEHLRRFY 1497