BLASTX nr result

ID: Panax21_contig00031317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031317
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28942.3| unnamed protein product [Vitis vinifera]              350   2e-94
ref|XP_002273713.1| PREDICTED: glutamate receptor 3.7 [Vitis vin...   350   2e-94
ref|XP_002301626.1| glutamate-gated kainate-type ion channel rec...   347   1e-93
ref|XP_002524180.1| glutamate receptor 3 plant, putative [Ricinu...   347   2e-93
dbj|BAL15054.1| glutamate receptor 3.1 [Solanum lycopersicum]         330   2e-88

>emb|CBI28942.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  350 bits (897), Expect = 2e-94
 Identities = 176/228 (77%), Positives = 191/228 (83%)
 Frame = +1

Query: 1    GLVIVAPIRNSKSSAWVFLKPFTWELWCVTAASFIMIAVVIWILEHRVNDDFRGPPKRQI 180
            GLVIVAP+ N+K SAWVFLKPFT E+WCVTAA+F+MIAVVIWILEHRVNDDFRGPPKRQ+
Sbjct: 490  GLVIVAPVHNTKLSAWVFLKPFTVEMWCVTAAAFVMIAVVIWILEHRVNDDFRGPPKRQL 549

Query: 181  ITMFLFSLSTLFKTNQEDTLSALGRXXXXXXXXXXXXITSSYTASLTSILTVQQLSSPIT 360
            ITMFLFS STLFKTNQEDT S LGR            ITSSYTASLTSILTVQQLSSPIT
Sbjct: 550  ITMFLFSFSTLFKTNQEDTRSTLGRIVMVVWLFLLMVITSSYTASLTSILTVQQLSSPIT 609

Query: 361  GIDSLIASKWPIGYQVGSFAYSYMTDILNIRRSRLISLDTPEDYERALKKGPNNGGVGAI 540
            GIDSLIAS  PIGYQVGSFA+SY+ D L + +SRL+SL +PE YE AL+KGP  GGV AI
Sbjct: 610  GIDSLIASDLPIGYQVGSFAFSYLRDSLYVHQSRLVSLGSPEAYEMALRKGPKGGGVAAI 669

Query: 541  VDELPYVELFLSTQTDFRIIGQSFTKSGWGFVFQKDSPLAIDLSTAIL 684
            VDELPYVELFL  Q DF + GQ+FTKSGWGF FQKDSPLA DLSTAIL
Sbjct: 670  VDELPYVELFLEKQKDFGVFGQTFTKSGWGFAFQKDSPLAADLSTAIL 717


>ref|XP_002273713.1| PREDICTED: glutamate receptor 3.7 [Vitis vinifera]
          Length = 909

 Score =  350 bits (897), Expect = 2e-94
 Identities = 176/228 (77%), Positives = 191/228 (83%)
 Frame = +1

Query: 1    GLVIVAPIRNSKSSAWVFLKPFTWELWCVTAASFIMIAVVIWILEHRVNDDFRGPPKRQI 180
            GLVIVAP+ N+K SAWVFLKPFT E+WCVTAA+F+MIAVVIWILEHRVNDDFRGPPKRQ+
Sbjct: 561  GLVIVAPVHNTKLSAWVFLKPFTVEMWCVTAAAFVMIAVVIWILEHRVNDDFRGPPKRQL 620

Query: 181  ITMFLFSLSTLFKTNQEDTLSALGRXXXXXXXXXXXXITSSYTASLTSILTVQQLSSPIT 360
            ITMFLFS STLFKTNQEDT S LGR            ITSSYTASLTSILTVQQLSSPIT
Sbjct: 621  ITMFLFSFSTLFKTNQEDTRSTLGRIVMVVWLFLLMVITSSYTASLTSILTVQQLSSPIT 680

Query: 361  GIDSLIASKWPIGYQVGSFAYSYMTDILNIRRSRLISLDTPEDYERALKKGPNNGGVGAI 540
            GIDSLIAS  PIGYQVGSFA+SY+ D L + +SRL+SL +PE YE AL+KGP  GGV AI
Sbjct: 681  GIDSLIASDLPIGYQVGSFAFSYLRDSLYVHQSRLVSLGSPEAYEMALRKGPKGGGVAAI 740

Query: 541  VDELPYVELFLSTQTDFRIIGQSFTKSGWGFVFQKDSPLAIDLSTAIL 684
            VDELPYVELFL  Q DF + GQ+FTKSGWGF FQKDSPLA DLSTAIL
Sbjct: 741  VDELPYVELFLEKQKDFGVFGQTFTKSGWGFAFQKDSPLAADLSTAIL 788


>ref|XP_002301626.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222843352|gb|EEE80899.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 861

 Score =  347 bits (891), Expect = 1e-93
 Identities = 167/228 (73%), Positives = 198/228 (86%)
 Frame = +1

Query: 1    GLVIVAPIRNSKSSAWVFLKPFTWELWCVTAASFIMIAVVIWILEHRVNDDFRGPPKRQI 180
            GLVIVAPIRNSKSSAWVFLKPFT E+WCVTAASF++IAVVIW+LEHRVNDDFRGPP+RQ+
Sbjct: 513  GLVIVAPIRNSKSSAWVFLKPFTAEMWCVTAASFVVIAVVIWVLEHRVNDDFRGPPRRQL 572

Query: 181  ITMFLFSLSTLFKTNQEDTLSALGRXXXXXXXXXXXXITSSYTASLTSILTVQQLSSPIT 360
            +TMF+FS STLFKTN+E T+S LG+            IT+SYTASLTSILT+QQLSSPIT
Sbjct: 573  VTMFMFSFSTLFKTNKETTVSPLGKLVMVVWLFLLMVITASYTASLTSILTIQQLSSPIT 632

Query: 361  GIDSLIASKWPIGYQVGSFAYSYMTDILNIRRSRLISLDTPEDYERALKKGPNNGGVGAI 540
            GI+SLIAS WPIGYQ GSFAY+Y+++ L I RSRL+ L +PE+YE AL++GP++GGV AI
Sbjct: 633  GIESLIASHWPIGYQTGSFAYNYLSETLYIARSRLVPLGSPEEYESALRRGPSDGGVAAI 692

Query: 541  VDELPYVELFLSTQTDFRIIGQSFTKSGWGFVFQKDSPLAIDLSTAIL 684
            VDELPYVELFLS+Q DF IIGQ FT+ GWGF FQ++SPLA+D+STAIL
Sbjct: 693  VDELPYVELFLSSQKDFGIIGQPFTRGGWGFAFQRESPLALDISTAIL 740


>ref|XP_002524180.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223536549|gb|EEF38195.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 921

 Score =  347 bits (889), Expect = 2e-93
 Identities = 173/229 (75%), Positives = 194/229 (84%), Gaps = 1/229 (0%)
 Frame = +1

Query: 1    GLVIVAPIRNSKSSAWVFLKPFTWELWCVTAASFIMIAVVIWILEHRVNDDFRGPPKRQI 180
            GLVI+APIRNSKSSAWVFLKPFT E+WCVTAASF+MIAVVIWILEHRVND+FRGPP+RQI
Sbjct: 569  GLVILAPIRNSKSSAWVFLKPFTVEMWCVTAASFLMIAVVIWILEHRVNDEFRGPPRRQI 628

Query: 181  ITMFLFSLSTLFKTNQEDTLSALGRXXXXXXXXXXXXITSSYTASLTSILTVQQLSSPIT 360
            +TMF+FS STLFKTNQE T+S L R            IT+SYTASLTSILTV+QLSSPIT
Sbjct: 629  VTMFMFSFSTLFKTNQETTISPLARMVMVVWLFVLMVITASYTASLTSILTVEQLSSPIT 688

Query: 361  GIDSLIASKWPIGYQVGSFAYSYMTDILNIRRSRLISLDTPEDYERALKKGPNN-GGVGA 537
            GIDSLIASKWPIGYQVGSFAY Y+ + L I RSRL+ L TPE+YERAL+ GP N GGV A
Sbjct: 689  GIDSLIASKWPIGYQVGSFAYEYLYESLYISRSRLVPLGTPEEYERALRLGPQNVGGVAA 748

Query: 538  IVDELPYVELFLSTQTDFRIIGQSFTKSGWGFVFQKDSPLAIDLSTAIL 684
            +VDELPYVELFL+   DF IIGQ FT+ GWGF FQ+DSPLA+D+STAIL
Sbjct: 749  VVDELPYVELFLAKHGDFGIIGQPFTRGGWGFAFQRDSPLALDMSTAIL 797


>dbj|BAL15054.1| glutamate receptor 3.1 [Solanum lycopersicum]
          Length = 866

 Score =  330 bits (846), Expect = 2e-88
 Identities = 172/228 (75%), Positives = 190/228 (83%)
 Frame = +1

Query: 1    GLVIVAPIRNSKSSAWVFLKPFTWELWCVTAASFIMIAVVIWILEHRVNDDFRGPPKRQI 180
            GLVIVAPI  S+SSAWVFLKPFT E+W VTA SF++IAVVIWILEHRVN+DFRGPPKRQI
Sbjct: 521  GLVIVAPIDTSESSAWVFLKPFTLEMWGVTALSFLIIAVVIWILEHRVNEDFRGPPKRQI 580

Query: 181  ITMFLFSLSTLFKTNQEDTLSALGRXXXXXXXXXXXXITSSYTASLTSILTVQQLSSPIT 360
             TMFLFS STLFKTNQE+T+S LGR            ITSSYTASLTSILTVQQLSSPIT
Sbjct: 581  TTMFLFSFSTLFKTNQENTVSTLGRMVMVVWLFLLLVITSSYTASLTSILTVQQLSSPIT 640

Query: 361  GIDSLIASKWPIGYQVGSFAYSYMTDILNIRRSRLISLDTPEDYERALKKGPNNGGVGAI 540
            GIDSLIAS   IGYQVGSFAYSY+ DILNI  SRL SL +PE++E AL++G  NGGV AI
Sbjct: 641  GIDSLIASNSLIGYQVGSFAYSYLKDILNIAPSRLKSLRSPEEFEAALRQGLGNGGVMAI 700

Query: 541  VDELPYVELFLSTQTDFRIIGQSFTKSGWGFVFQKDSPLAIDLSTAIL 684
            VDELPY+ELFL  +TDF IIG+ FTKSGWGF F+KDSPLA D+STAIL
Sbjct: 701  VDELPYMELFLQNRTDFGIIGRPFTKSGWGFAFKKDSPLANDMSTAIL 748


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