BLASTX nr result

ID: Panax21_contig00031313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031313
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197816.3| gamma-irradiation and mitomycin c induced 1 [Ar...   152   3e-35
ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252...   147   1e-33
emb|CBI23013.3| unnamed protein product [Vitis vinifera]              143   2e-32
ref|XP_003588509.1| hypothetical protein MTR_1g007990 [Medicago ...   141   8e-32
dbj|BAB10394.1| unnamed protein product [Arabidopsis thaliana]        139   3e-31

>ref|NP_197816.3| gamma-irradiation and mitomycin c induced 1 [Arabidopsis thaliana]
            gi|332005896|gb|AED93279.1| gamma-irradiation and
            mitomycin c induced 1 [Arabidopsis thaliana]
          Length = 1598

 Score =  152 bits (385), Expect = 3e-35
 Identities = 74/181 (40%), Positives = 121/181 (66%)
 Frame = +2

Query: 14   KSVEAKALSQATRWGLVNDMQSLAQCCVRVGSYFPSFSIACYDRYDNRTPFTRIPEVMVK 193
            K+V  +  S+A RW L ++++SL  C VRVGS  P F IAC+D+Y N+ PFT +P + V+
Sbjct: 856  KTVVVRPSSKAARWELDDNLESLP-CNVRVGSSLPPFRIACFDKYKNKIPFTSVPSLEVE 914

Query: 194  ICSKRDVLSYLNKMNTYFSSNKLALRVEDLLIESSELDKIRPRYEAKLMICSEGEPFNVS 373
            + +    L  ++K+ T   ++ L L++E++L+E+ ELD+IRP YEA L I +   PF+VS
Sbjct: 915  LEASPGFLIKIDKLETNLINDGLILKIENMLVETDELDQIRPNYEATLEIRAMDNPFSVS 974

Query: 374  IPCQVFPRSLQHVKTNPKNFMKHLLPGNVVKKLVLEVFDVYGNHVKEDSEILLAMDGFCL 553
            +PC+V P  L+ V  N    +++LLP + V+  +LE+FD Y NHV E +++L+ +DG+ +
Sbjct: 975  VPCKVNPGPLKRVAVNNPKALENLLPDSTVEDFILELFDGYNNHVAEGTDVLIHIDGYRI 1034

Query: 554  Q 556
            +
Sbjct: 1035 E 1035


>ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252197 [Vitis vinifera]
          Length = 1887

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/153 (47%), Positives = 98/153 (64%)
 Frame = +2

Query: 98   RVGSYFPSFSIACYDRYDNRTPFTRIPEVMVKICSKRDVLSYLNKMNTYFSSNKLALRVE 277
            R GS  P FSIACYD Y+N+ PFT IPE ++K      VL+  +KM    SS+ L L+V+
Sbjct: 1163 RAGSCLPPFSIACYDSYENQIPFTSIPEFIIKSNWNGGVLADFDKMKLELSSDNLTLKVK 1222

Query: 278  DLLIESSELDKIRPRYEAKLMICSEGEPFNVSIPCQVFPRSLQHVKTNPKNFMKHLLPGN 457
            D+LIESS+LDKIRP Y   L++C   E  ++S+ C+V P  L+     P      LLPG 
Sbjct: 1223 DVLIESSDLDKIRPSYATTLVLCPRDELPSISVACEVNPGPLERAIAQPPVSDNQLLPGC 1282

Query: 458  VVKKLVLEVFDVYGNHVKEDSEILLAMDGFCLQ 556
            V+++LVLE+FD YGNH +E  E+   +DGFC Q
Sbjct: 1283 VIEELVLEMFDAYGNHAREGLEVQFNVDGFCFQ 1315


>emb|CBI23013.3| unnamed protein product [Vitis vinifera]
          Length = 1718

 Score =  143 bits (361), Expect = 2e-32
 Identities = 83/210 (39%), Positives = 112/210 (53%), Gaps = 29/210 (13%)
 Frame = +2

Query: 14   KSVEAKALSQATRWGLVNDMQSLAQCCVRVGSYFPSFSIACYDRYDNRTPFTRIPEVMVK 193
            K V  KAL + + W   +D+Q+     VR GS  P FSIACYD Y+N+ PFT IPE ++K
Sbjct: 938  KRVLVKALPKVSSWRFSSDIQNTVYS-VRAGSCLPPFSIACYDSYENQIPFTSIPEFIIK 996

Query: 194  ICSKRDVLSYLNKMNTYFSSNKLALRVEDLLIESSELDKIRPRYEAKLMICSEGEPFNVS 373
                  VL+  +KM    SS+ L L+V+D+LIESS+LDKIRP Y   L++C   E  ++S
Sbjct: 997  SNWNGGVLADFDKMKLELSSDNLTLKVKDVLIESSDLDKIRPSYATTLVLCPRDELPSIS 1056

Query: 374  IPCQVFPRSLQHVKTNPKNFMKHLLPGNVVKKLVLEV----------------------- 484
            + C+V P  L+     P      LLPG V+++LVLEV                       
Sbjct: 1057 VACEVNPGPLERAIAQPPVSDNQLLPGCVIEELVLEVSSHIVIILPHDDQFIHTIVLCML 1116

Query: 485  ------FDVYGNHVKEDSEILLAMDGFCLQ 556
                  FD YGNH +E  E+   +DGFC Q
Sbjct: 1117 FLPLFMFDAYGNHAREGLEVQFNVDGFCFQ 1146


>ref|XP_003588509.1| hypothetical protein MTR_1g007990 [Medicago truncatula]
           gi|355477557|gb|AES58760.1| hypothetical protein
           MTR_1g007990 [Medicago truncatula]
          Length = 1009

 Score =  141 bits (355), Expect = 8e-32
 Identities = 76/179 (42%), Positives = 111/179 (62%), Gaps = 1/179 (0%)
 Frame = +2

Query: 14  KSVEAKALSQATRWGLVNDMQSLAQCCVRVGSYFPSFSIACYDRYDNRTPFTRIPE-VMV 190
           K +  K +  A ++ L+ + Q   +  VRVGS FPS +IACYD +DNR PF +IP+ V V
Sbjct: 261 KRMTVKRIHCALKYKLLTNDQC-QELDVRVGSTFPSLAIACYDIHDNRAPFKQIPDDVTV 319

Query: 191 KICSKRDVLSYLNKMNTYFSSNKLALRVEDLLIESSELDKIRPRYEAKLMICSEGEPFNV 370
           ++ + +D+   ++   T  S +K+ L++ D +I SSELDKIRP Y   L+I SE  PF+V
Sbjct: 320 ELQAAKDLYFKVHGAKTRLSFDKMTLKIMDAMITSSELDKIRPSYRTTLIIASENVPFSV 379

Query: 371 SIPCQVFPRSLQHVKTNPKNFMKHLLPGNVVKKLVLEVFDVYGNHVKEDSEILLAMDGF 547
           S PC+V P  L++ K  P      LLPG + K+L  E+FD Y NHV E  E+ + ++GF
Sbjct: 380 SFPCRVSPGYLEYAKLKPNIREDQLLPGFIFKELAFEMFDTYRNHVSEGVEVNIFLEGF 438


>dbj|BAB10394.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1634

 Score =  139 bits (350), Expect = 3e-31
 Identities = 75/208 (36%), Positives = 121/208 (58%), Gaps = 27/208 (12%)
 Frame = +2

Query: 14   KSVEAKALSQATRWGLVNDMQSLAQCCVRVGSYFPSFSIACYDRYDNRTPFTRIPEVMVK 193
            K+V  +  S+A RW L ++++SL  C VRVGS  P F IAC+D+Y N+ PFT +P + V+
Sbjct: 865  KTVVVRPSSKAARWELDDNLESLP-CNVRVGSSLPPFRIACFDKYKNKIPFTSVPSLEVE 923

Query: 194  ICSKRDVLSYLNKMNTYFSSNKLALRVEDLLIESSELDKIRPRYEAKLMICSEGEPFNVS 373
            + +    L  ++K+ T   ++ L L++E++L+E+ ELD+IRP YEA L I +   PF+VS
Sbjct: 924  LEASPGFLIKIDKLETNLINDGLILKIENMLVETDELDQIRPNYEATLEIRAMDNPFSVS 983

Query: 374  IPCQVFPRSLQHVKTNPKNFMKHLLPGNVVKKLVLEV----------------------- 484
            +PC+V P  L+ V  N    +++LLP + V+  +LEV                       
Sbjct: 984  VPCKVNPGPLKRVAVNNPKALENLLPDSTVEDFILEVYNIGLCTLSNRNQLFLRIKLTII 1043

Query: 485  ----FDVYGNHVKEDSEILLAMDGFCLQ 556
                FD Y NHV E +++L+ +DG+ ++
Sbjct: 1044 FMQLFDGYNNHVAEGTDVLIHIDGYRIE 1071


Top