BLASTX nr result

ID: Panax21_contig00031312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031312
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252...   169   2e-40
emb|CBI23013.3| unnamed protein product [Vitis vinifera]              169   2e-40
emb|CAN73471.1| hypothetical protein VITISV_039356 [Vitis vinifera]   169   2e-40
ref|XP_002874183.1| predicted protein [Arabidopsis lyrata subsp....   140   1e-31
ref|NP_197816.3| gamma-irradiation and mitomycin c induced 1 [Ar...   133   1e-29

>ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252197 [Vitis vinifera]
          Length = 1887

 Score =  169 bits (428), Expect = 2e-40
 Identities = 77/138 (55%), Positives = 110/138 (79%)
 Frame = -3

Query: 415  LSGLLKVSNGYGETVSFSVLLDKKVIFKEESQTEKREIRIASMIPDNCVVGSLLENVVFE 236
            LSGLL+V+ GYG+ VS SVL   KV+FK+E QTEKRE+R AS++P +C  GS LEN+VFE
Sbjct: 1332 LSGLLRVTTGYGKNVSLSVLSGNKVVFKQELQTEKRELRAASIVPQSCAAGSQLENIVFE 1391

Query: 235  IVNSEGGVDETIDDDETSGLFHTLTLNSETMNIDDSVRYSFRHGRCTVRVIPLPQREGTF 56
            I+NS+G VDET+ ++E  G FHTLT+ S++  +D SVR++FR+GRC +  IPLP+++G F
Sbjct: 1392 IINSKGEVDETVHEEEKHGQFHTLTIMSDSFYLDGSVRFAFRNGRCIIPTIPLPRKQGDF 1451

Query: 55   SFVAAYTRSPELNMVIKV 2
            +F+AA++  PEL++ +KV
Sbjct: 1452 TFLAAHSCHPELSLAVKV 1469


>emb|CBI23013.3| unnamed protein product [Vitis vinifera]
          Length = 1718

 Score =  169 bits (428), Expect = 2e-40
 Identities = 77/138 (55%), Positives = 110/138 (79%)
 Frame = -3

Query: 415  LSGLLKVSNGYGETVSFSVLLDKKVIFKEESQTEKREIRIASMIPDNCVVGSLLENVVFE 236
            LSGLL+V+ GYG+ VS SVL   KV+FK+E QTEKRE+R AS++P +C  GS LEN+VFE
Sbjct: 1163 LSGLLRVTTGYGKNVSLSVLSGNKVVFKQELQTEKRELRAASIVPQSCAAGSQLENIVFE 1222

Query: 235  IVNSEGGVDETIDDDETSGLFHTLTLNSETMNIDDSVRYSFRHGRCTVRVIPLPQREGTF 56
            I+NS+G VDET+ ++E  G FHTLT+ S++  +D SVR++FR+GRC +  IPLP+++G F
Sbjct: 1223 IINSKGEVDETVHEEEKHGQFHTLTIMSDSFYLDGSVRFAFRNGRCIIPTIPLPRKQGDF 1282

Query: 55   SFVAAYTRSPELNMVIKV 2
            +F+AA++  PEL++ +KV
Sbjct: 1283 TFLAAHSCHPELSLAVKV 1300


>emb|CAN73471.1| hypothetical protein VITISV_039356 [Vitis vinifera]
          Length = 1117

 Score =  169 bits (428), Expect = 2e-40
 Identities = 77/138 (55%), Positives = 110/138 (79%)
 Frame = -3

Query: 415 LSGLLKVSNGYGETVSFSVLLDKKVIFKEESQTEKREIRIASMIPDNCVVGSLLENVVFE 236
           LSGLL+V+ GYG+ VS SVL   KV+FK+E QTEKRE+R AS++P +C  GS LEN+VFE
Sbjct: 203 LSGLLRVTTGYGKNVSLSVLSGNKVVFKQELQTEKRELRAASIVPQSCAAGSQLENIVFE 262

Query: 235 IVNSEGGVDETIDDDETSGLFHTLTLNSETMNIDDSVRYSFRHGRCTVRVIPLPQREGTF 56
           I+NS+G VDET+ ++E  G FHTLT+ S++  +D SVR++FR+GRC +  IPLP+++G F
Sbjct: 263 IINSKGEVDETVHEEEKHGQFHTLTIMSDSFYLDGSVRFAFRNGRCIIPTIPLPRKQGDF 322

Query: 55  SFVAAYTRSPELNMVIKV 2
           +F+AA++  PEL++ +KV
Sbjct: 323 TFLAAHSCHPELSLAVKV 340


>ref|XP_002874183.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297320020|gb|EFH50442.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1607

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/138 (45%), Positives = 99/138 (71%)
 Frame = -3

Query: 415  LSGLLKVSNGYGETVSFSVLLDKKVIFKEESQTEKREIRIASMIPDNCVVGSLLENVVFE 236
            LSG+LKV+ GYG++VS SV+   +VIF++ESQ E+RE+R+ + +PD C  GS L N++F+
Sbjct: 1060 LSGILKVTEGYGKSVSLSVMSGNEVIFRKESQIEERELRLVTELPDCCAAGSNLVNLIFQ 1119

Query: 235  IVNSEGGVDETIDDDETSGLFHTLTLNSETMNIDDSVRYSFRHGRCTVRVIPLPQREGTF 56
            + +S+G +D  I  DE SG FHT+ + S++  ++ ++RY+F HG C V  + LP+ EG F
Sbjct: 1120 VTDSDGSLDTRIHHDEKSGCFHTMCIESDSSIVESTIRYAFVHGSCKVPSLSLPENEGVF 1179

Query: 55   SFVAAYTRSPELNMVIKV 2
            S+   ++R PEL+M +KV
Sbjct: 1180 SYRVFHSRYPELHMSVKV 1197


>ref|NP_197816.3| gamma-irradiation and mitomycin c induced 1 [Arabidopsis thaliana]
            gi|332005896|gb|AED93279.1| gamma-irradiation and
            mitomycin c induced 1 [Arabidopsis thaliana]
          Length = 1598

 Score =  133 bits (335), Expect = 1e-29
 Identities = 59/138 (42%), Positives = 97/138 (70%)
 Frame = -3

Query: 415  LSGLLKVSNGYGETVSFSVLLDKKVIFKEESQTEKREIRIASMIPDNCVVGSLLENVVFE 236
            LSG+LKV+ GYG++VS SV+   +VIF +ESQ ++R++R+ + +PD C  G+ L N++F+
Sbjct: 1052 LSGILKVTEGYGKSVSLSVMSGNEVIFCKESQIDERQLRLVTELPDCCTAGTNLMNLIFQ 1111

Query: 235  IVNSEGGVDETIDDDETSGLFHTLTLNSETMNIDDSVRYSFRHGRCTVRVIPLPQREGTF 56
            +   +G +D +I  DE SG FHT+++ S++ +++ ++RY+F HG C V  + LP+ EG F
Sbjct: 1112 VTELDGSLDTSIHHDEKSGCFHTMSIESDSSSVESAIRYAFVHGSCKVSSLSLPENEGVF 1171

Query: 55   SFVAAYTRSPELNMVIKV 2
            S    ++R PEL M IK+
Sbjct: 1172 SCRVFHSRYPELQMSIKI 1189


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