BLASTX nr result

ID: Panax21_contig00031305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031305
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35
ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro...   138   6e-31
ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro...   137   8e-31
ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloro...   137   8e-31

>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  153 bits (387), Expect = 1e-35
 Identities = 97/197 (49%), Positives = 107/197 (54%), Gaps = 19/197 (9%)
 Frame = -1

Query: 536 RHSCDVRARNTLWTLFSLD-EDNKTTNVET-----------QNVASGSVSGPXXXXXXXX 393
           R SCDVR RNTLW+LF+ D E N +   E              ++  SV GP        
Sbjct: 114 RKSCDVRVRNTLWSLFNQDSERNPSVKKEPFKGGPEIEAVEPRISCSSVRGPVFESKEEE 173

Query: 392 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALYEKTMKDHIDLDSQPKKHSGMNF- 216
                                                 KTMKDHIDLDSQ KK SG +F 
Sbjct: 174 EIENETDTENENEDDFEDDEEGIVIEPEPVQEAVLEELKTMKDHIDLDSQSKKTSGRDFK 233

Query: 215 ------WSAASVFSKKWQKWMRKQTKIKKPSRNDGSGSASLPVEKPISRQFRETQSEIAD 54
                 WSAASVFSKK QKW +KQ K+KK  RNDG GSA+LPVEKPI RQ+RETQSEIAD
Sbjct: 234 EIAGSFWSAASVFSKKLQKWRQKQ-KLKK-QRNDGPGSATLPVEKPIGRQYRETQSEIAD 291

Query: 53  YGFGRRSCDTGPRFSLD 3
           YGFGRRSCDT PRFSLD
Sbjct: 292 YGFGRRSCDTDPRFSLD 308


>ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|222854183|gb|EEE91730.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score =  140 bits (353), Expect = 1e-31
 Identities = 75/99 (75%), Positives = 80/99 (80%), Gaps = 7/99 (7%)
 Frame = -1

Query: 278 KTMKDHIDLDSQPKKHSGMN-------FWSAASVFSKKWQKWMRKQTKIKKPSRNDGSGS 120
           KTMKDHIDLDSQ KK SG +       FWSAASVFSKK QKW +KQ K+KK  RN G GS
Sbjct: 266 KTMKDHIDLDSQSKKTSGRDLKEIAGSFWSAASVFSKKLQKWRQKQ-KLKK-QRNGGPGS 323

Query: 119 ASLPVEKPISRQFRETQSEIADYGFGRRSCDTGPRFSLD 3
           A+LPVEKPI RQ+RETQSEIADYGFGRRSCDT PRFSLD
Sbjct: 324 ATLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLD 362


>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
           vinifera]
          Length = 663

 Score =  138 bits (347), Expect = 6e-31
 Identities = 74/99 (74%), Positives = 80/99 (80%), Gaps = 7/99 (7%)
 Frame = -1

Query: 278 KTMKDHIDLDSQPKKHSGMN-------FWSAASVFSKKWQKWMRKQTKIKKPSRNDGSGS 120
           KTMKDHIDLDSQ KK  G +       FWSAASVFSKK QKW RKQ K+KK  R++G GS
Sbjct: 237 KTMKDHIDLDSQNKKPPGRDLKEIAGSFWSAASVFSKKLQKWRRKQ-KMKK--RDNGGGS 293

Query: 119 ASLPVEKPISRQFRETQSEIADYGFGRRSCDTGPRFSLD 3
           A+LPVEKPI RQ+RETQSEIADYGFGRRSCDT PRFSLD
Sbjct: 294 ATLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLD 332


>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 662

 Score =  137 bits (346), Expect = 8e-31
 Identities = 72/99 (72%), Positives = 80/99 (80%), Gaps = 7/99 (7%)
 Frame = -1

Query: 278 KTMKDHIDLDSQPKKHSGMNF-------WSAASVFSKKWQKWMRKQTKIKKPSRNDGSGS 120
           K++KDH+DLDSQPKK SG +F       WSAASVFSKKWQKW  KQ K+KK  R +G  S
Sbjct: 252 KSIKDHMDLDSQPKKPSGRDFKEIAGSFWSAASVFSKKWQKWRDKQ-KLKK--RRNGDIS 308

Query: 119 ASLPVEKPISRQFRETQSEIADYGFGRRSCDTGPRFSLD 3
           A+LPVEKPI RQFRETQSEIADYG+GRRSCDT PRFSLD
Sbjct: 309 ATLPVEKPIGRQFRETQSEIADYGYGRRSCDTDPRFSLD 347


>ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 655

 Score =  137 bits (346), Expect = 8e-31
 Identities = 72/99 (72%), Positives = 80/99 (80%), Gaps = 7/99 (7%)
 Frame = -1

Query: 278 KTMKDHIDLDSQPKKHSGMNF-------WSAASVFSKKWQKWMRKQTKIKKPSRNDGSGS 120
           K++KDH+DLDSQPKK SG +F       WSAASVFSKKWQKW  KQ K+KK  R +G  S
Sbjct: 245 KSIKDHMDLDSQPKKPSGRDFKEIAGSFWSAASVFSKKWQKWRDKQ-KLKK--RRNGDIS 301

Query: 119 ASLPVEKPISRQFRETQSEIADYGFGRRSCDTGPRFSLD 3
           A+LPVEKPI RQFRETQSEIADYG+GRRSCDT PRFSLD
Sbjct: 302 ATLPVEKPIGRQFRETQSEIADYGYGRRSCDTDPRFSLD 340


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